PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:356.7 nTPM
FANTOM5:62.3 Scaled Tags Per Million
Pig:495.6 nTPM
Mouse:794.9 nTPM
Allen mouse:17.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 356.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 228.9
1984 Male, age 76, both hemispheres 261.1
2090 Male, age 80, both hemispheres 234.6
2188 Female, age 91, both hemispheres 226.7
2301 Female, age 85, both hemispheres 193.2
Area postrema
nTPM: 223.1
2054 Male, age 76, both hemispheres 244.9
2799 Male, age 61, both hemispheres 235.1
2306 Male, age 80, both hemispheres 189.1
Dorsal cochlear nucleus
nTPM: 258.9
2802 Male, age 74, right hemisphere 320.5
2058 Male, age 76, both hemispheres 269.1
2187 Female, age 91, both hemispheres 264.3
2370 Male, age 61, both hemispheres 231.0
2378 Male, age 80, both hemispheres 209.3
Dorsal medullary reticular nucleus
nTPM: 258.0
2040 Female, age 85, both hemispheres 343.2
2088 Male, age 76, both hemispheres 221.5
2373 Male, age 61, both hemispheres 209.1
Dorsal motor vagal complex
nTPM: 256.8
2133 Female, age 91, both hemispheres 366.7
2844 Male, age 55, unknown 292.7
2643 Male, age 74, both hemispheres 291.1
2000 Male, age 74, unknown 278.4
2797 Male, age 61, both hemispheres 233.9
2813 Female, age 72, unknown 227.9
2185 Male, age 76, both hemispheres 204.3
2807 Female, age 85, both hemispheres 159.7
Dorsal tegmental nucleus
nTPM: 256.8
2083 Male, age 80, both hemispheres 306.5
2326 Male, age 74, both hemispheres 256.1
2358 Male, age 61, both hemispheres 233.6
1936 Male, age 76, left hemisphere 230.9
Dorsolateral tegmental area
nTPM: 261.1
2654 Male, age 80, both hemispheres 306.3
2751 Female, age 85, both hemispheres 290.0
2141 Male, age 76, both hemispheres 263.2
2360 Male, age 74, both hemispheres 226.0
2337 Male, age 61, both hemispheres 219.9
Gigantocellular reticular nuclei, medullary
nTPM: 235.6
1876 Female, age 85, both hemispheres 279.6
2462 Male, age 74, both hemispheres 268.9
2022 Male, age 76, right hemisphere 234.7
2310 Male, age 80, both hemispheres 226.1
2387 Female, age 91, both hemispheres 215.9
2314 Male, age 61, both hemispheres 188.6
Gigantocellular reticular nuclei, pars
nTPM: 251.3
2084 Female, age 85, both hemispheres 324.0
2168 Male, age 76, both hemispheres 296.5
2336 Male, age 61, both hemispheres 223.1
2706 Male, age 80, both hemispheres 208.4
2330 Male, age 80, both hemispheres 204.5
Inferior olive
nTPM: 238.3
2563 Male, age 74, both hemispheres 360.4
2085 Female, age 85, both hemispheres 258.2
2628 Female, age 91, both hemispheres 213.8
2379 Male, age 80, both hemispheres 203.4
2178 Male, age 61, both hemispheres 155.6
Kolliker-Fuse nucleus
nTPM: 266.5
2163 Male, age 80, both hemispheres 317.6
2315 Male, age 76, right hemisphere 268.0
2793 Female, age 91, left hemisphere 213.9
Lateral lemniscal nuclei
nTPM: 245.9
2169 Male, age 76, both hemispheres 301.9
2453 Male, age 74, right hemisphere 269.7
2746 Female, age 85, left hemisphere 256.8
2036 Male, age 80, both hemispheres 219.6
2320 Female, age 91, left hemisphere 181.4
Lateral medullary reticular nucleus
nTPM: 251.2
2044 Male, age 76, both hemispheres 334.4
2804 Female, age 91, both hemispheres 299.2
2190 Female, age 85, both hemispheres 243.7
2305 Male, age 74, both hemispheres 230.0
2852 Male, age 80, both hemispheres 215.6
2374 Male, age 61, both hemispheres 184.6
Lateral parabrachial nucleus
nTPM: 256.4
2139 Female, age 85, right hemisphere 330.5
2790 Male, age 61, both hemispheres 244.2
2013 Male, age 80, both hemispheres 242.2
2792 Male, age 76, both hemispheres 208.9
Lateral vestibular nucleus
nTPM: 267.3
2184 Male, age 76, both hemispheres 302.6
2311 Male, age 80, both hemispheres 231.9
Locus coeruleus
nTPM: 356.7
2123 Female, age 91, both hemispheres 526.2
2014 Male, age 55, unknown 397.7
2788 Male, age 74, unknown 345.3
2720 Male, age 74, both hemispheres 340.6
2317 Female, age 72, unknown 317.7
1980 Male, age 76, both hemispheres 297.7
2162 Male, age 80, both hemispheres 272.1
Medial olivary nucleus
nTPM: 217.2
2138 Female, age 91, both hemispheres 273.5
1962 Male, age 76, both hemispheres 221.1
2851 Male, age 80, both hemispheres 202.3
1943 Male, age 61, both hemispheres 171.7
Medial parabrachial nucleus
nTPM: 273.2
2170 Female, age 91, both hemispheres 322.0
2854 Male, age 80, both hemispheres 274.1
2463 Female, age 85, right hemisphere 262.9
2156 Male, age 61, both hemispheres 259.3
2786 Male, age 76, both hemispheres 247.7
Medial periolivary nuclei
nTPM: 274.4
2171 Female, age 85, both hemispheres 364.0
2063 Male, age 76, both hemispheres 350.5
2791 Male, age 74, right hemisphere 268.3
2081 Male, age 80, both hemispheres 205.5
2458 Female, age 91, both hemispheres 183.9
Medial vestibular nucleus
nTPM: 311.7
2134 Male, age 76, both hemispheres 329.8
2743 Female, age 85, both hemispheres 321.1
2093 Male, age 80, both hemispheres 314.1
2801 Male, age 74, both hemispheres 312.4
2803 Female, age 91, both hemispheres 311.9
2624 Male, age 61, both hemispheres 281.0
Motor facial nucleus
nTPM: 266.8
2062 Male, age 76, both hemispheres 343.6
2365 Male, age 74, right hemisphere 280.7
2697 Female, age 85, both hemispheres 253.5
2126 Male, age 61, both hemispheres 244.4
2795 Female, age 91, both hemispheres 241.5
2327 Male, age 80, both hemispheres 237.2
Motor hypoglossal nucleus
nTPM: 255.9
2125 Female, age 91, both hemispheres 328.8
2132 Female, age 85, both hemispheres 300.7
2277 Male, age 76, both hemispheres 220.4
2182 Male, age 80, both hemispheres 217.9
2461 Male, age 61, both hemispheres 211.5
Motor trigeminal nucleus
nTPM: 236.1
2079 Male, age 80, both hemispheres 270.6
2335 Male, age 61, both hemispheres 253.0
2560 Male, age 74, both hemispheres 235.2
2309 Male, age 76, both hemispheres 227.8
2321 Female, age 91, both hemispheres 194.2
Nuclei of the trapezoid body
nTPM: 298.8
2159 Male, age 61, both hemispheres 388.1
2735 Female, age 85, both hemispheres 341.2
1983 Male, age 76, both hemispheres 337.4
2166 Male, age 80, both hemispheres 236.9
2368 Female, age 91, both hemispheres 190.3
Nucleus ambiguus
nTPM: 280.4
2096 Female, age 85, both hemispheres 329.8
2071 Male, age 76, both hemispheres 231.1
Nucleus cuneatus
nTPM: 229.8
2564 Male, age 74, both hemispheres 327.4
2131 Male, age 76, both hemispheres 282.5
2100 Male, age 76, both hemispheres 236.4
2376 Male, age 61, both hemispheres 234.5
2562 Male, age 61, both hemispheres 231.7
2805 Female, age 91, both hemispheres 220.0
2381 Male, age 80, both hemispheres 196.0
2808 Female, age 85, both hemispheres 176.4
2380 Male, age 80, both hemispheres 163.7
Nucleus gracilis
nTPM: 196.0
2627 Male, age 74, both hemispheres 280.5
2382 Male, age 80, both hemispheres 155.1
2299 Female, age 85, both hemispheres 152.4
Nucleus raphe magnus
nTPM: 299.1
2160 Male, age 61, both hemispheres 455.9
2172 Female, age 85, both hemispheres 353.9
2455 Male, age 74, both hemispheres 315.7
2328 Male, age 80, both hemispheres 250.5
2051 Male, age 76, both hemispheres 229.1
2459 Female, age 91, both hemispheres 189.4
Nucleus raphe obscurus
nTPM: 222.0
2845 Female, age 85, midline 246.2
2800 Male, age 61, midline 237.8
2142 Male, age 76, midline 181.9
Nucleus raphe pallidus
nTPM: 285.1
1924 Male, age 61, midline 336.4
2183 Male, age 80, midline 327.7
2145 Male, age 76, midline 191.2
Nucleus tractus solitarii
nTPM: 232.2
2144 Female, age 91, right hemisphere 308.2
2656 Male, age 76, both hemispheres 243.8
2191 Female, age 85, both hemispheres 195.9
2307 Male, age 80, both hemispheres 180.9
Paramedian reticular nucleus
nTPM: 301.6
2050 Female, age 85, both hemispheres 351.3
2057 Male, age 80, both hemispheres 320.9
2313 Male, age 61, both hemispheres 309.0
2052 Male, age 76, both hemispheres 225.2
Parvicellular reticular nuclei
nTPM: 267.2
2119 Male, age 80, both hemispheres 316.6
2095 Male, age 76, both hemispheres 268.1
2558 Male, age 74, both hemispheres 216.9
Parvicellular reticular nuclei, medullary
nTPM: 300.2
2189 Female, age 91, both hemispheres 323.5
2091 Female, age 85, both hemispheres 322.6
2181 Male, age 80, left hemisphere 254.5
Pedunculopontine tegmental nucleus
nTPM: 269.5
1921 Female, age 85, both hemispheres 281.3
2334 Male, age 80, both hemispheres 277.0
2338 Male, age 61, both hemispheres 250.4
Peritrigeminal nucleus
nTPM: 337.6
2067 Female, age 85, both hemispheres 370.0
2136 Male, age 76, both hemispheres 341.5
2179 Male, age 61, both hemispheres 301.2
Pontine nuclei
nTPM: 314.7
1863 Male, age 55, unknown 439.8
2787 Female, age 85, both hemispheres 402.5
2727 Male, age 61, right hemisphere 401.6
2109 Female, age 72, unknown 334.0
1968 Male, age 76, left hemisphere 263.2
2454 Male, age 74, left hemisphere 241.2
2115 Male, age 80, left hemisphere 223.4
2319 Female, age 91, both hemispheres 212.0
Pontine raphe nucleus
nTPM: 312.2
2122 Female, age 85, midline 349.8
2853 Male, age 76, midline 274.6
Posteroventral cochlear nucleus
nTPM: 255.7
2752 Female, age 85, both hemispheres 342.8
2070 Male, age 76, both hemispheres 280.2
2341 Male, age 80, both hemispheres 238.8
2371 Male, age 61, both hemispheres 219.5
2135 Female, age 91, both hemispheres 197.4
Prepositus hypoglossal nucleus
nTPM: 306.2
2855 Female, age 85, right hemisphere 329.6
2086 Male, age 80, both hemispheres 282.9
Principal sensory trigeminal nucleus
nTPM: 276.1
2158 Male, age 61, both hemispheres 393.6
2008 Male, age 80, left hemisphere 262.5
2324 Male, age 76, both hemispheres 256.2
2367 Female, age 91, left hemisphere 192.3
Reticular pontine nucleus, caudal
nTPM: 257.3
2092 Male, age 76, both hemispheres 293.5
2332 Male, age 80, right hemisphere 269.1
2559 Male, age 74, both hemispheres 247.7
2457 Female, age 91, both hemispheres 218.8
Reticular pontine nucleus, oral
nTPM: 267.8
1939 Male, age 80, both hemispheres 293.5
2012 Female, age 85, both hemispheres 291.1
2361 Male, age 74, both hemispheres 289.6
2167 Male, age 76, both hemispheres 260.0
2366 Female, age 91, both hemispheres 204.7
Reticulotegmental nucleus
nTPM: 280.0
2325 Male, age 76, both hemispheres 299.8
2452 Male, age 74, both hemispheres 292.7
2333 Male, age 80, both hemispheres 268.9
2322 Female, age 91, both hemispheres 258.4
Spinal trigeminal nucleus, caudal
nTPM: 259.8
2390 Female, age 91, both hemispheres 353.0
2447 Male, age 76, both hemispheres 276.6
2642 Male, age 74, both hemispheres 272.2
2308 Male, age 80, both hemispheres 215.5
2312 Male, age 61, both hemispheres 181.5
Spinal trigeminal nucleus, interpolar
nTPM: 330.4
2066 Male, age 76, right hemisphere 458.9
2625 Male, age 61, both hemispheres 371.3
2389 Female, age 91, both hemispheres 279.5
2033 Male, age 80, both hemispheres 273.6
2386 Female, age 85, both hemispheres 268.8
Spinal trigeminal nucleus, oral
nTPM: 266.2
2737 Female, age 85, both hemispheres 312.7
2164 Male, age 80, both hemispheres 277.1
1978 Male, age 76, both hemispheres 208.7
Spinal vestibular nucleus
nTPM: 273.0
2186 Female, age 91, both hemispheres 306.0
2780 Male, age 80, both hemispheres 288.2
2806 Female, age 85, both hemispheres 277.3
2384 Male, age 74, both hemispheres 258.3
2796 Male, age 61, both hemispheres 255.8
2748 Male, age 76, both hemispheres 252.7
Subcoeruleus area
nTPM: 284.3
2323 Female, age 91, left hemisphere 344.6
1958 Male, age 80, both hemispheres 291.9
2451 Male, age 74, both hemispheres 287.4
2369 Female, age 85, left hemisphere 255.0
2089 Male, age 76, left hemisphere 242.7
Superior olive
nTPM: 256.9
1875 Female, age 85, both hemispheres 337.2
2364 Male, age 74, right hemisphere 272.8
2020 Male, age 76, both hemispheres 253.0
2329 Male, age 80, right hemisphere 232.3
2561 Female, age 91, both hemispheres 188.9
Superior vestibular nucleus
nTPM: 275.4
2383 Male, age 74, both hemispheres 285.2
2061 Male, age 76, both hemispheres 278.3
2015 Male, age 80, both hemispheres 262.7
Ventral medullary reticular nucleus
nTPM: 219.1
2060 Male, age 76, both hemispheres 253.6
2372 Male, age 61, both hemispheres 184.7
Ventral periolivary nuclei
nTPM: 273.4
2165 Male, age 80, both hemispheres 331.8
2130 Female, age 85, both hemispheres 307.8
2023 Male, age 76, both hemispheres 247.0
2794 Female, age 91, left hemisphere 206.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 287.6
2741 Female, age 85, both hemispheres 354.0
1986 Male, age 76, both hemispheres 344.4
2302 Female, age 91, both hemispheres 271.1
2180 Male, age 61, both hemispheres 255.4
2118 Male, age 80, both hemispheres 213.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 247.3
2359 Male, age 61, both hemispheres 279.2
2840 Female, age 85, both hemispheres 277.6
2449 Male, age 74, both hemispheres 266.6
1959 Male, age 76, both hemispheres 255.6
2161 Male, age 80, both hemispheres 234.7
2456 Female, age 91, both hemispheres 170.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 26.9
FF:10182-103D2 60 years, female 30.3
FF:10165-103B3 76 years, female 23.5
Medulla oblongata
Scaled Tags Per Million: 62.3
FF:10174-103C3 60 years, female 149.4
FF:10038-101F2 18-64 years, mixed 19.8
FF:10155-103A2 76 years, female 17.7
Pons
Scaled Tags Per Million: 33.9
FF:10033-101E6 18-54 years, mixed 33.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 495.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 380.3
Samples: 4

Max nTPM: 445.4
Min nTPM: 311.0
Sample A Female 311.0
Sample B Female 429.6
Sample C Male 445.4
Sample D Male 335.3
Pons
nTPM: 495.6
Samples: 4

Max nTPM: 601.9
Min nTPM: 369.9
Sample A Female 547.3
Sample B Female 369.9
Sample C Male 463.1
Sample D Male 601.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 794.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 794.9
Samples: 4

Max nTPM: 815.3
Min nTPM: 785.9
Sample A Male 787.3
Sample B Male 785.9
Sample C Female 815.3
Sample D Female 791.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 17.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 17.1
70191997 Antisense, RP_050517_01_A08, Mouse strain C57BL/6J (56 days, male) 17.1
Pons
Expression energy: 14.3
70191997 Antisense, RP_050517_01_A08, Mouse strain C57BL/6J (56 days, male) 14.3

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