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C12orf57
HPA
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  • C12orf57
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:213.6 nTPM
FANTOM5:101.5 Scaled Tags Per Million
Pig:46.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059163
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 213.6
Samples: 246

Max nTPM: 469.5
Min nTPM: 107.5
Std nTPM: 61.1
Median nTPM: 200.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 469.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 459.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 436.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 415.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 412.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 379.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 360.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 348.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 346.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 340.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 338.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 335.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 327.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 327.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 324.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 321.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 321.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 318.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 317.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 314.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 313.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 311.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 305.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 302.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 301.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 298.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 288.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 287.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 287.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 285.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 283.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 281.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 280.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 278.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 278.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 273.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 270.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 266.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 259.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 259.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 258.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 258.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 255.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 255.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 255.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 254.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 252.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 251.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 251.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 250.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 246.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 244.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 243.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 243.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 243.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 242.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 241.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 241.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 238.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 237.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 237.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 236.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 236.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 235.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 235.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 234.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 234.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 232.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 232.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 231.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 231.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 231.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 230.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 229.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 229.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 229.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 227.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 227.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 227.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 226.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 226.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 225.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 225.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 225.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 224.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 224.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 222.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 222.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 218.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 218.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 217.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 217.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 217.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 216.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 215.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 214.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 214.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 211.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 211.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 211.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 210.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 208.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 208.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 208.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 208.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 207.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 207.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 205.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 204.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 204.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 204.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 203.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 203.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 203.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 202.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 202.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 201.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 201.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 201.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 201.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 200.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 200.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 200.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 200.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 199.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 199.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 199.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 198.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 197.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 197.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 197.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 196.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 196.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 196.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 196.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 195.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 195.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 195.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 193.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 193.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 192.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 192.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 191.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 191.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 190.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 190.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 190.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 190.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 189.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 189.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 188.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 188.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 188.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 187.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 187.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 186.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 186.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 186.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 184.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 183.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 183.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 183.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 182.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 182.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 182.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 181.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 181.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 181.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 181.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 180.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 180.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 179.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 179.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 178.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 178.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 177.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 177.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 176.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 174.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 174.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 174.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 174.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 173.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 172.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 172.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 172.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 171.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 171.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 170.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 170.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 170.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 169.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 169.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 169.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 169.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 169.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 168.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 167.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 167.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 166.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 163.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 163.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 163.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 162.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 161.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 161.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 161.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 161.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 161.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 159.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 157.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 157.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 157.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 155.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 155.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 154.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 154.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 152.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 150.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 148.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 148.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 147.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 147.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 147.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 147.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 147.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 145.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 144.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 142.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 141.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 141.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 138.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 135.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 132.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 127.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 126.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 124.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 124.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 123.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 122.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 117.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 114.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 107.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

101.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 101.5
FF:10164-103B2 76 years, female 101.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.0
Pig sample Sample description nTPM
Caudate
nTPM: 46.0
Samples: 4

Max nTPM: 58.2
Min nTPM: 37.1
Sample A Female 43.2
Sample B Female 58.2
Sample C Male 45.4
Sample D Male 37.1

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