HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:206.2 nTPM
HPA Brain:98.5 nTPM
GTEx:206.2 nTPM
FANTOM5:72.1 Scaled Tags Per Million
Pig:54.7 nTPM
Mouse:87.4 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059163
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 98.5
Sample id Sample description nTPM
Hippocampus
nTPM: 94.5
1898 Male, age 80, left hemisphere 110.2
2529 Female, age 94, left hemisphere 107.0
2621 Female, age 67, right hemisphere 104.4
2148 Female, age 91, left hemisphere 91.0
1911 Female, age 85, right hemisphere 82.1
1855 Male, age 76, left hemisphere 72.4
Dentate gyrus
nTPM: 94.6
2530 Female, age 94, left hemisphere 119.5
2531 Female, age 67, both hemispheres 97.8
2010 Male, age 76, both hemispheres 95.3
2528 Male, age 74, both hemispheres 89.5
2246 Female, age 85, both hemispheres 85.3
1927 Female, age 91, both hemispheres 80.0
Entorhinal gyrus
nTPM: 95.6
1787 Male, age 76, left hemisphere 111.4
2686 Male, age 75, right hemisphere 103.6
2764 Male, age 80, right hemisphere 103.5
2117 Female, age 91, right hemisphere 95.1
1938 Female, age 85, left hemisphere 86.2
2613 Female, age 94, left hemisphere 73.6
Hippocampus, CA1
nTPM: 87.6
2749 Male, age 80, left hemisphere 103.6
2527 Male, age 74, both hemispheres 98.2
2082 Female, age 91, right hemisphere 86.8
1873 Female, age 85, both hemispheres 77.0
2045 Male, age 76, both hemispheres 72.2
Hippocampus, CA2
nTPM: 95.9
1963 Male, age 80, left hemisphere 113.7
2437 Female, age 94, left hemisphere 105.5
2249 Male, age 74, both hemispheres 101.4
1892 Male, age 76, both hemispheres 86.5
1940 Female, age 85, left hemisphere 86.4
2113 Female, age 91, right hemisphere 81.7
Hippocampus, CA3
nTPM: 91.7
2861 Female, age 67, both hemispheres 99.9
2436 Male, age 74, both hemispheres 96.7
2620 Female, age 94, left hemisphere 90.8
2137 Male, age 80, left hemisphere 89.5
1867 Male, age 76, both hemispheres 87.6
1891 Female, age 85, both hemispheres 85.4
Parahippocampal cortex
nTPM: 89.7
2532 Female, age 72, left hemisphere 103.1
1990 Female, age 91, right hemisphere 99.3
2250 Female, age 67, right hemisphere 99.2
2018 Male, age 76, both hemispheres 95.6
1850 Male, age 80, both hemispheres 94.4
1933 Female, age 85, both hemispheres 94.1
2245 Female, age 91, both hemispheres 87.3
2692 Male, age 74, both hemispheres 81.5
2622 Female, age 67, right hemisphere 78.5
2693 Female, age 94, both hemispheres 64.4
Perirhinal gyrus
nTPM: 98.5
1794 Male, age 80, right hemisphere 123.6
1847 Female, age 91, left hemisphere 104.8
1841 Female, age 85, right hemisphere 94.5
2848 Male, age 76, right hemisphere 86.1
2521 Female, age 94, right hemisphere 83.4
Subiculum
nTPM: 91.2
1977 Female, age 85, both hemispheres 113.6
2438 Female, age 94, left hemisphere 95.9
2619 Male, age 74, both hemispheres 92.6
1901 Male, age 80, both hemispheres 82.4
2729 Female, age 91, right hemisphere 82.0
2042 Male, age 76, both hemispheres 80.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 206.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 206.2
Samples: 197

Max nTPM: 655.0
Min nTPM: 108.1
Std nTPM: 67.5
Median nTPM: 190.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 655.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 494.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 448.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 435.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 362.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 361.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 334.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 323.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 319.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 318.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 305.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.1
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.2
Samples: 4

Max nTPM: 54.6
Min nTPM: 28.0
Sample A Female 54.6
Sample B Female 33.4
Sample C Male 28.7
Sample D Male 28.0
Dorsal hippocampus
nTPM: 54.7
Samples: 4

Max nTPM: 71.6
Min nTPM: 41.3
Sample A Female 71.6
Sample B Female 60.1
Sample C Male 45.7
Sample D Male 41.3
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 49.2
Min nTPM: 23.2
Sample A Female 36.6
Sample B Female 49.2
Sample C Male 36.3
Sample D Male 23.2
Ventral hippocampus
nTPM: 45.6
Samples: 4

Max nTPM: 50.1
Min nTPM: 38.3
Sample A Female 49.7
Sample B Female 38.3
Sample C Male 44.4
Sample D Male 50.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 87.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.4
Samples: 4

Max nTPM: 101.6
Min nTPM: 79.8
Sample A Male 88.2
Sample B Male 101.6
Sample C Female 79.8
Sample D Female 80.1
Hippocampal formation
nTPM: 82.5
Samples: 4

Max nTPM: 106.5
Min nTPM: 64.4
Sample A Male 70.7
Sample B Male 88.2
Sample C Female 64.4
Sample D Female 106.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
386251 Antisense, RP_040804_01_E02, Mouse strain C57BL/6J (56 days, male) 6.7

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