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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:184.1 nTPM
HPA Brain:326.9 nTPM
GTEx:184.1 nTPM
FANTOM5:334.7 Scaled Tags Per Million
Pig:111.9 nTPM
Mouse:51.9 nTPM
Allen mouse:13.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB017519
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

326.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 138.5
2288 Male, age 75, left hemisphere 166.0
2481 Female, age 94, left hemisphere 163.2
2846 Female, age 79, unknown 162.9
1854 Male, age 80, left hemisphere 146.0
2290 Female, age 72, unknown 136.7
2289 Male, age 61, right hemisphere 128.4
1781 Male, age 74, unknown 110.5
1857 Female, age 85, left hemisphere 94.3
Globus pallidus, externus
nTPM: 326.9
2646 Male, age 61, right hemisphere 395.0
1996 Male, age 80, right hemisphere 373.0
2567 Female, age 72, unknown 357.4
2395 Male, age 75, both hemispheres 267.0
2772 Female, age 79, unknown 242.1
Globus pallidus, internus
nTPM: 310.9
2111 Female, age 85, right hemisphere 369.0
2483 Female, age 94, right hemisphere 339.8
2566 Female, age 72, unknown 335.2
2778 Female, age 91, both hemispheres 320.7
2037 Male, age 80, right hemisphere 285.8
2287 Male, age 75, right hemisphere 267.2
1818 Male, age 74, unknown 258.6
Nucleus accumbens
nTPM: 143.5
2391 Female, age 94, left hemisphere 217.4
2698 Female, age 72, unknown 194.8
2732 Male, age 80, right hemisphere 180.5
2286 Male, age 75, left hemisphere 137.3
2824 Male, age 61, right hemisphere 114.1
1806 Female, age 85, left hemisphere 112.3
1783 Male, age 74, unknown 106.7
1856 Female, age 91, right hemisphere 84.9
Nucleus basalis of Meynert
nTPM: 245.5
2569 Male, age 61, both hemispheres 429.3
2393 Male, age 80, right hemisphere 195.2
2484 Female, age 94, left hemisphere 185.1
2821 Male, age 75, both hemispheres 172.3
Nucleus of the diagonal band
nTPM: 95.3
1812 Female, age 91, both hemispheres 148.9
1979 Male, age 74, unknown 106.0
2775 Male, age 80, right hemisphere 76.4
2029 Male, age 61, right hemisphere 74.8
2195 Female, age 85, both hemispheres 70.5
Putamen
nTPM: 172.7
2489 Female, age 72, unknown 249.2
2647 Male, age 75, left hemisphere 243.8
1829 Male, age 74, unknown 179.9
2482 Female, age 94, left hemisphere 179.8
2466 Female, age 79, unknown 139.0
1937 Female, age 91, right hemisphere 128.2
1838 Male, age 80, right hemisphere 89.0
Septal nuclei
nTPM: 119.6
2394 Male, age 61, left hemisphere 180.8
2199 Male, age 80, right hemisphere 157.0
2629 Female, age 94, right hemisphere 122.3
2059 Female, age 85, both hemispheres 117.4
2009 Female, age 91, both hemispheres 98.9
2031 Female, age 72, unknown 82.0
1960 Male, age 74, unknown 78.8
Stria terminalis, bed nucleus
nTPM: 104.4
2201 Male, age 74, unknown 130.4
1974 Female, age 91, both hemispheres 107.6
2486 Female, age 94, both hemispheres 75.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 134.4
Samples: 246

Max nTPM: 410.1
Min nTPM: 31.4
Std nTPM: 60.4
Median nTPM: 122.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 410.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 339.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 337.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 301.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 298.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 295.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 286.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 272.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 270.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 267.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 258.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 257.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 246.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 246.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 240.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 239.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 237.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 235.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 228.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 224.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 220.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 220.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 218.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 215.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 207.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 206.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 204.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 200.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 200.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 200.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 200.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 198.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 197.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 197.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 195.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 195.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 193.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 191.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 191.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 190.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 189.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 189.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 188.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 188.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 186.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 185.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 185.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 184.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 184.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 183.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 182.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 181.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 179.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 176.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 175.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 174.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 171.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 170.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 168.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 167.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 166.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 164.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 162.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 162.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 162.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 162.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 160.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 160.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 160.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 159.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 157.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 157.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 157.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 155.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 154.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 153.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 152.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 151.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 150.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 150.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 148.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 147.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 147.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 146.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 145.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 145.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 145.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 144.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 143.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 143.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 142.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 142.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 141.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 140.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 138.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 137.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 137.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 135.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 134.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 134.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 134.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 133.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 132.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 132.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 131.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 130.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 130.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 129.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 128.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 127.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 126.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 125.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 124.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 124.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 123.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 123.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 122.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 122.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 120.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 119.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 119.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 119.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 119.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 118.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 117.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 116.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 116.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 115.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 114.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 113.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 113.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 112.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 111.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 111.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 110.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 109.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 108.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 107.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 107.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 106.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 106.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 105.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 104.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 104.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 104.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 103.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 102.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 102.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 101.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 101.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 101.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 101.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 100.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 99.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 99.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 98.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 98.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 97.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 97.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 97.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 97.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 97.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 96.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 95.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 94.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 93.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 93.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 91.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 91.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 91.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 90.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 90.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 90.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 90.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 90.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 89.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 89.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 89.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 88.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 87.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 87.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 86.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 85.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 83.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 83.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 83.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 83.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 83.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 82.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 82.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 81.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 81.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 81.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 81.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 81.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 80.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 80.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 79.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 79.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 77.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 76.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 74.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 74.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 74.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 74.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 72.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 72.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 72.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 71.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 70.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 70.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 69.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 68.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 67.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 66.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 66.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 60.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 60.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 57.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 54.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 52.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 42.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 31.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 97.1
Samples: 246

Max nTPM: 494.9
Min nTPM: 26.0
Std nTPM: 68.9
Median nTPM: 80.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 494.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 459.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 367.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 330.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 299.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 294.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 293.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 265.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 259.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 241.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 238.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 237.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 235.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 230.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 229.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 227.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 219.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 218.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 210.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 184.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 183.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 176.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 173.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 169.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 169.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 168.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 167.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 166.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 163.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 162.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 161.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 159.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 159.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 155.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 154.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 154.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 152.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 148.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 147.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 145.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 145.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 143.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 142.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 141.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 141.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 140.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 136.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 134.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 134.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 133.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 132.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 130.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 128.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 128.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 125.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 124.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 123.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 122.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 121.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 121.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 119.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 118.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 117.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 115.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 113.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 111.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 111.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 111.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 111.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 111.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 106.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 106.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 104.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 104.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 104.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 103.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 103.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 103.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 102.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 101.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 101.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 101.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 100.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 100.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 99.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 99.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 98.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 98.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 98.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 97.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 97.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 96.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 95.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 95.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 94.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 93.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 93.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 93.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 92.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 91.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 91.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 91.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 91.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 91.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 90.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 90.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 89.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 88.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 88.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 88.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 88.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 88.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 87.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 86.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 85.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 84.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 83.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 83.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 82.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 81.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 81.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 80.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 80.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 80.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 80.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 79.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 76.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 75.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 74.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 73.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 72.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 72.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 72.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 72.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 72.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 72.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 71.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 70.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 69.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 69.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 67.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 67.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 67.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 67.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 66.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 65.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 65.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 64.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 64.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 63.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 62.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 61.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 61.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 61.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 61.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 60.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 59.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 59.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 58.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 58.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 58.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 57.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 57.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 57.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 57.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 56.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 56.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 55.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 55.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 55.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 54.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 54.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 54.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 54.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 53.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 53.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 52.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 52.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 52.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 52.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 51.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 50.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 50.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 49.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 48.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 47.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 47.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 47.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 45.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 45.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 45.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 45.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 44.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 44.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 44.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 43.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 43.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 42.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 42.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 41.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 41.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 41.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 41.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 40.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 40.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 40.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 40.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 39.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 39.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 39.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 38.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 38.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 38.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 38.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 38.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 38.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 37.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 37.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 36.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 35.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 34.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 34.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 33.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 32.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 32.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 32.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 31.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 31.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 31.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 31.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 30.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 27.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 26.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 26.0
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Brain - Putamen (basal ganglia)
Average nTPM: 184.1
Samples: 205

Max nTPM: 584.1
Min nTPM: 55.4
Std nTPM: 90.7
Median nTPM: 167.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 584.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 540.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 532.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 463.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 411.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 394.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 378.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 373.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 368.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 360.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 341.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 340.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 338.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 331.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 316.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 314.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 313.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 313.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 303.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 299.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 298.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 296.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 292.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 291.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 281.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 281.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 277.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 274.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 273.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 272.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 269.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 264.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 264.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 262.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 257.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 256.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 255.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 251.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 248.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 247.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 244.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 243.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 242.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 242.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 240.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 239.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 239.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 237.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 236.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 235.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 232.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 232.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 230.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 227.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 227.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 225.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 222.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 220.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 220.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 218.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 217.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 217.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 216.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 215.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 215.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 214.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 207.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 206.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 203.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 202.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 200.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 199.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 196.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 196.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 195.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 194.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 192.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 192.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 191.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 189.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 188.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 186.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 186.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 184.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 184.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 184.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 182.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 180.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 180.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 180.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 179.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 179.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 178.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 177.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 176.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 171.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 171.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 169.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 169.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 169.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 169.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 168.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 167.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 166.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 165.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 165.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 164.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 162.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 161.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 160.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 160.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 159.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 158.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 156.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 156.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 155.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 155.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 154.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 151.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 149.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 149.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 148.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 147.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 146.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 146.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 145.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 144.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 143.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 141.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 141.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 140.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 140.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 138.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 138.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 138.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 137.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 137.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 136.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 133.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 133.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 131.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 131.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 131.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 129.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 129.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 128.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 128.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 128.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 127.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 127.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 126.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 125.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 122.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 120.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 118.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 117.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 115.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 114.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 114.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 113.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 113.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 109.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 108.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 107.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 107.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 106.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 104.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 103.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 102.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 101.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 100.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 99.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 99.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 99.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 98.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 94.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 92.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 92.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 90.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 90.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 89.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 89.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 88.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 87.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 86.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 85.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 85.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 83.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 82.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 81.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 80.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 80.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 71.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 71.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 69.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 68.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 68.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 65.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 65.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 63.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 62.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 58.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 56.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

334.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 129.8
FF:10164-103B2 76 years, female 129.8
Nucleus accumbens
Scaled Tags Per Million: 209.0
FF:10037-101F1 23-56 years, mixed 209.0
Putamen
Scaled Tags Per Million: 103.3
FF:10176-103C5 60 years, female 103.3
Globus pallidus
Scaled Tags Per Million: 334.7
FF:10161-103A8 76 years, female 424.5
FF:10175-103C4 60 years, female 244.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.9
Pig sample Sample description nTPM
Caudate
nTPM: 62.3
Samples: 4

Max nTPM: 86.6
Min nTPM: 45.9
Sample A Female 45.9
Sample B Female 63.3
Sample C Male 86.6
Sample D Male 53.5
Putamen
nTPM: 112.0
Samples: 4

Max nTPM: 192.5
Min nTPM: 70.4
Sample A Female 70.4
Sample B Female 104.9
Sample C Male 192.5
Sample D Male 80.0
Septum
nTPM: 56.3
Samples: 4

Max nTPM: 59.6
Min nTPM: 51.1
Sample A Female 51.1
Sample B Female 59.6
Sample C Male 54.8
Sample D Male 59.6
Ventral pallidum
nTPM: 65.6
Samples: 4

Max nTPM: 87.2
Min nTPM: 53.0
Sample A Female 62.7
Sample B Female 87.2
Sample C Male 59.6
Sample D Male 53.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 41.2
Samples: 4

Max nTPM: 42.5
Min nTPM: 40.0
Sample A Male 40.0
Sample B Male 40.5
Sample C Female 42.5
Sample D Female 41.8
Septum
nTPM: 51.9
Samples: 4

Max nTPM: 58.6
Min nTPM: 48.2
Sample A Male 49.0
Sample B Male 51.8
Sample C Female 48.2
Sample D Female 58.6
Ventral forebrain
nTPM: 39.1
Samples: 4

Max nTPM: 45.2
Min nTPM: 34.4
Sample A Male 34.4
Sample B Male 45.2
Sample C Female 35.6
Sample D Female 41.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 13.8
79556599 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 13.8
79360312 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 9.3
Pallidum
Expression energy: 11.6
79556599 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 11.6
79360312 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 6.7

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