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RPL24
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:777.3 nTPM
FANTOM5:114.2 Scaled Tags Per Million
Pig:275.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051653
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

777.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 777.3
Samples: 246

Max nTPM: 2141.3
Min nTPM: 361.1
Std nTPM: 238.3
Median nTPM: 730.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2141.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1706.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1651.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1543.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1495.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1423.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1371.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1361.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1335.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1262.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1244.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1237.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1220.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1193.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1187.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1176.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1168.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1108.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1107.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1102.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1085.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1085.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1082.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1082.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1072.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1071.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1057.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1053.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1043.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1011.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1008.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1004.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1004.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1001.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1001.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1000.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 999.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 996.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 989.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 973.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 967.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 966.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 952.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 946.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 944.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 940.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 938.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 937.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 936.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 934.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 920.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 918.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 914.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 898.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 896.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 894.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 886.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 882.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 880.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 876.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 875.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 872.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 867.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 865.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 865.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 863.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 848.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 845.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 844.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 842.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 841.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 840.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 840.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 836.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 833.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 831.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 830.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 823.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 823.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 822.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 820.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 819.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 817.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 817.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 816.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 808.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 803.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 798.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 797.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 795.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 792.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 790.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 788.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 787.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 782.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 782.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 781.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 778.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 774.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 773.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 769.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 769.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 765.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 764.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 764.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 763.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 762.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 762.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 762.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 759.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 759.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 755.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 753.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 747.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 747.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 744.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 742.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 741.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 739.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 738.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 733.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 732.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 731.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 730.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 729.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 728.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 722.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 722.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 722.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 721.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 718.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 716.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 712.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 708.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 704.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 702.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 702.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 702.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 701.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 700.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 699.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 698.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 696.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 694.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 694.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 694.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 691.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 686.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 686.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 686.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 682.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 673.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 672.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 671.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 671.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 670.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 666.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 664.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 663.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 662.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 660.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 660.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 658.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 658.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 657.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 657.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 656.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 655.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 655.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 654.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 649.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 645.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 644.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 635.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 634.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 633.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 631.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 630.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 625.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 624.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 621.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 619.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 619.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 616.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 613.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 612.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 612.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 610.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 609.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 605.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 604.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 603.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 603.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 594.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 593.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 592.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 590.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 587.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 586.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 586.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 584.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 583.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 582.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 581.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 580.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 579.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 576.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 574.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 573.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 569.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 566.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 560.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 559.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 558.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 557.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 556.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 552.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 551.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 551.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 549.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 549.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 548.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 547.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 545.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 544.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 539.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 536.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 534.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 523.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 522.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 510.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 504.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 498.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 488.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 485.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 478.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 478.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 474.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 467.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 456.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 454.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 451.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 450.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 443.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 433.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 361.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

114.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 114.2
FF:10164-103B2 76 years, female 114.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.9
Pig sample Sample description nTPM
Caudate
nTPM: 275.9
Samples: 4

Max nTPM: 285.2
Min nTPM: 260.0
Sample A Female 274.8
Sample B Female 285.2
Sample C Male 283.6
Sample D Male 260.0

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