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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:117.8 nTPM
HPA Brain:55.4 nTPM
GTEx:117.8 nTPM
FANTOM5:211.5 Scaled Tags Per Million
Pig:66.1 nTPM
Mouse:361.1 nTPM
Allen mouse:8.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046091
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 52.7
2481 Female, age 94, left hemisphere 63.4
2846 Female, age 79, unknown 60.5
2290 Female, age 72, unknown 58.3
1857 Female, age 85, left hemisphere 52.8
2288 Male, age 75, left hemisphere 52.7
1854 Male, age 80, left hemisphere 52.4
1781 Male, age 74, unknown 42.7
2289 Male, age 61, right hemisphere 38.9
Globus pallidus, externus
nTPM: 55.4
2772 Female, age 79, unknown 69.0
1996 Male, age 80, right hemisphere 65.5
2646 Male, age 61, right hemisphere 59.0
2395 Male, age 75, both hemispheres 57.0
2567 Female, age 72, unknown 26.6
Globus pallidus, internus
nTPM: 54.8
2483 Female, age 94, right hemisphere 66.9
2287 Male, age 75, right hemisphere 63.6
2778 Female, age 91, both hemispheres 63.3
2037 Male, age 80, right hemisphere 59.3
1818 Male, age 74, unknown 57.9
2566 Female, age 72, unknown 36.6
2111 Female, age 85, right hemisphere 36.0
Nucleus accumbens
nTPM: 51.3
2698 Female, age 72, unknown 61.1
2391 Female, age 94, left hemisphere 59.0
2286 Male, age 75, left hemisphere 57.0
1856 Female, age 91, right hemisphere 55.8
1806 Female, age 85, left hemisphere 48.1
2824 Male, age 61, right hemisphere 46.0
1783 Male, age 74, unknown 44.3
2732 Male, age 80, right hemisphere 39.6
Nucleus basalis of Meynert
nTPM: 52.5
2569 Male, age 61, both hemispheres 61.9
2821 Male, age 75, both hemispheres 55.8
2393 Male, age 80, right hemisphere 47.7
2484 Female, age 94, left hemisphere 44.3
Nucleus of the diagonal band
nTPM: 53.1
1812 Female, age 91, both hemispheres 61.8
2775 Male, age 80, right hemisphere 53.1
2195 Female, age 85, both hemispheres 52.2
1979 Male, age 74, unknown 50.9
2029 Male, age 61, right hemisphere 47.6
Putamen
nTPM: 45.5
2482 Female, age 94, left hemisphere 53.4
2466 Female, age 79, unknown 52.7
1838 Male, age 80, right hemisphere 49.6
1937 Female, age 91, right hemisphere 49.5
1829 Male, age 74, unknown 43.5
2489 Female, age 72, unknown 36.3
2647 Male, age 75, left hemisphere 33.9
Septal nuclei
nTPM: 50.8
2031 Female, age 72, unknown 65.7
2009 Female, age 91, both hemispheres 53.1
2199 Male, age 80, right hemisphere 51.0
1960 Male, age 74, unknown 50.3
2394 Male, age 61, left hemisphere 48.5
2629 Female, age 94, right hemisphere 44.1
2059 Female, age 85, both hemispheres 43.0
Stria terminalis, bed nucleus
nTPM: 45.5
2201 Male, age 74, unknown 48.5
1974 Female, age 91, both hemispheres 46.9
2486 Female, age 94, both hemispheres 41.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 113.6
Samples: 246

Max nTPM: 191.4
Min nTPM: 61.0
Std nTPM: 20.0
Median nTPM: 110.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 191.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 189.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 185.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 174.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 165.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 164.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 164.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 164.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 163.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 161.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 155.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 155.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 151.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 149.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 146.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 144.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 144.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 143.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 143.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 142.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 140.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 140.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 138.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 137.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 137.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 137.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 137.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 136.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 136.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 135.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 135.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 133.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 133.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 133.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 131.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 131.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 130.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 129.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 129.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 129.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 129.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 128.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 127.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 127.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 127.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 126.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 126.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 125.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 125.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 125.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 125.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 124.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 124.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 124.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 124.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 123.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 123.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 123.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 123.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 122.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 122.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 122.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 121.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 121.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 121.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 121.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 120.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 120.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 120.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 120.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 120.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 120.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 119.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 119.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 119.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 119.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 119.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 119.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 118.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 117.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 117.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 117.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 117.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 117.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 117.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 117.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 117.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 116.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 116.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 116.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 116.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 115.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 115.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 115.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 115.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 115.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 115.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 115.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 115.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 115.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 114.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 114.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 114.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 114.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 114.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 113.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 113.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 113.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 112.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 112.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 111.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 111.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 111.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 111.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 110.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 110.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 110.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 110.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 110.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 110.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 110.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 110.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 110.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 110.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 109.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 109.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 109.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 109.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 108.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 108.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 108.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 108.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 108.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 108.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 107.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 106.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 106.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 106.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 106.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 106.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 106.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 106.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 105.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 105.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 105.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 105.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 105.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 104.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 104.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 104.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 104.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 104.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 104.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 103.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 103.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 103.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 103.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 103.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 103.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 103.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 102.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 102.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 102.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 102.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 101.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 101.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 101.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 101.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 101.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 100.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 100.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 99.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 99.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 99.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 99.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 99.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 99.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 99.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 98.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 98.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 98.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 98.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 98.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 98.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 97.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 97.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 97.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 97.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 96.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 95.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 95.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 95.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 95.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 95.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 94.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 94.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 94.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 94.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 93.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 93.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 93.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 92.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 92.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 92.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 92.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 92.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 91.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 91.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 90.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 90.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 90.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 89.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 89.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 89.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 88.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 83.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 82.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 82.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 81.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 80.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 77.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 71.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 70.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 70.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 115.4
Samples: 246

Max nTPM: 332.5
Min nTPM: 57.2
Std nTPM: 26.8
Median nTPM: 110.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 332.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 239.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 202.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 191.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 178.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 172.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 171.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 168.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 168.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 163.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 160.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 158.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 157.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 156.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 155.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 154.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 153.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 149.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 148.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 147.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 147.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 147.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 146.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 146.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 144.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 144.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 142.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 140.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 139.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 138.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 137.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 136.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 135.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 134.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 134.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 134.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 134.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 132.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 132.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 132.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 132.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 131.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 131.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 131.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 131.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 131.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 131.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 130.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 130.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 130.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 130.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 130.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 129.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 129.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 128.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 128.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 127.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 127.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 127.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 127.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 126.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 126.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 126.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 125.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 125.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 125.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 125.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 124.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 124.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 123.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 123.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 122.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 122.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 122.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 122.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 122.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 122.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 122.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 122.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 121.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 120.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 120.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 120.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 119.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 118.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 118.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 118.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 118.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 118.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 118.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 117.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 117.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 117.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 117.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 117.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 117.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 117.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 116.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 116.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 116.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 116.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 116.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 115.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 115.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 115.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 115.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 115.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 115.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 114.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 114.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 114.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 114.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 114.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 113.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 113.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 112.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 111.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 111.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 111.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 111.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 111.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 111.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 111.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 110.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 110.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 110.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 110.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 110.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 110.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 109.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 109.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 109.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 109.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 109.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 109.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 108.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 108.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 108.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 108.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 108.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 107.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 107.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 107.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 107.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 107.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 106.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 106.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 106.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 106.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 105.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 105.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 105.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 105.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 105.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 105.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 105.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 104.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 104.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 104.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 103.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 103.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 103.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 103.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 103.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 103.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 103.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 103.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 103.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 102.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 102.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 102.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 102.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 102.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 102.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 101.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 101.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 101.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 101.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 100.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 100.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 100.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 100.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 100.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 100.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 99.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 99.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 98.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 98.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 98.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 98.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 98.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 98.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 98.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 98.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 97.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 97.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 97.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 97.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 97.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 97.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 96.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 95.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 95.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 95.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 94.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 94.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 94.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 94.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 93.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 93.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 93.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 93.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 93.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 92.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 92.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 92.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 92.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 92.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 91.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 91.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 91.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 91.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 90.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 89.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 89.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 88.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 88.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 88.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 87.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 87.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 87.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 87.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 86.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 85.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 85.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 83.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 83.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 83.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 83.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 82.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 82.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 74.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 71.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 64.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 61.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 57.2
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Brain - Putamen (basal ganglia)
Average nTPM: 117.8
Samples: 205

Max nTPM: 228.7
Min nTPM: 73.4
Std nTPM: 20.6
Median nTPM: 115.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 228.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 188.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 184.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 183.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 182.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 182.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 161.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 160.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 158.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 149.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 148.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 148.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 147.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 145.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 144.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 143.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 143.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 142.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 141.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 140.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 140.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 139.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 139.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 138.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 137.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 137.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 136.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 136.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 136.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 134.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 134.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 134.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 133.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 133.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 132.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 132.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 132.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 132.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 130.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 130.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 129.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 129.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 129.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 129.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 128.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 128.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 128.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 128.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 128.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 128.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 127.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 127.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 126.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 126.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 126.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 126.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 125.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 125.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 125.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 124.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 124.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 124.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 123.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 123.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 123.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 123.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 123.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 122.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 122.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 122.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 122.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 121.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 121.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 121.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 120.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 120.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 120.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 120.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 120.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 120.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 119.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 119.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 119.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 119.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 118.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 118.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 118.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 118.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 118.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 118.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 118.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 117.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 116.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 116.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 116.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 116.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 116.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 115.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 115.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 115.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 115.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 115.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 114.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 114.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 114.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 114.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 114.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 114.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 114.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 113.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 113.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 112.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 112.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 112.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 112.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 112.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 112.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 112.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 112.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 112.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 112.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 111.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 111.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 111.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 111.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 111.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 111.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 110.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 110.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 110.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 110.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 110.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 109.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 109.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 109.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 109.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 109.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 109.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 109.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 108.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 108.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 108.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 108.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 107.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 107.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 107.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 106.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 106.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 106.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 106.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 105.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 105.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 105.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 105.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 105.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 105.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 104.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 104.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 104.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 103.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 103.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 103.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 103.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 102.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 102.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 102.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 101.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 101.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 100.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 100.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 100.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 99.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 99.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 99.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 98.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 98.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 98.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 97.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 97.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 95.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 94.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 94.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 94.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 94.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 94.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 92.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 92.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 92.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 91.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 91.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 90.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 89.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 88.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 88.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 88.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 86.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 86.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 85.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 85.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 83.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 83.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 74.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 73.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

211.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 130.4
FF:10164-103B2 76 years, female 130.4
Nucleus accumbens
Scaled Tags Per Million: 199.0
FF:10037-101F1 23-56 years, mixed 199.0
Putamen
Scaled Tags Per Million: 175.0
FF:10176-103C5 60 years, female 175.0
Globus pallidus
Scaled Tags Per Million: 211.5
FF:10175-103C4 60 years, female 283.3
FF:10161-103A8 76 years, female 139.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.1
Pig sample Sample description nTPM
Caudate
nTPM: 57.7
Samples: 4

Max nTPM: 67.1
Min nTPM: 50.1
Sample A Female 53.8
Sample B Female 59.6
Sample C Male 67.1
Sample D Male 50.1
Putamen
nTPM: 66.1
Samples: 4

Max nTPM: 84.6
Min nTPM: 56.6
Sample A Female 62.1
Sample B Female 56.6
Sample C Male 84.6
Sample D Male 60.9
Septum
nTPM: 56.3
Samples: 4

Max nTPM: 64.1
Min nTPM: 50.2
Sample A Female 64.1
Sample B Female 54.5
Sample C Male 56.2
Sample D Male 50.2
Ventral pallidum
nTPM: 54.3
Samples: 4

Max nTPM: 63.1
Min nTPM: 50.1
Sample A Female 51.6
Sample B Female 63.1
Sample C Male 50.1
Sample D Male 52.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

361.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 341.1
Samples: 4

Max nTPM: 349.9
Min nTPM: 336.9
Sample A Male 349.9
Sample B Male 336.9
Sample C Female 340.1
Sample D Female 337.5
Septum
nTPM: 361.1
Samples: 4

Max nTPM: 389.2
Min nTPM: 334.8
Sample A Male 341.6
Sample B Male 389.2
Sample C Female 378.7
Sample D Female 334.8
Ventral forebrain
nTPM: 319.5
Samples: 4

Max nTPM: 355.2
Min nTPM: 288.0
Sample A Male 288.0
Sample B Male 321.6
Sample C Female 355.2
Sample D Female 313.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.0
69262338 Antisense, RP_050303_02_B08, Mouse strain C57BL/6J (56 days, male) 8.0
Pallidum
Expression energy: 7.7
69262338 Antisense, RP_050303_02_B08, Mouse strain C57BL/6J (56 days, male) 7.7

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