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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
583.7
nTPM
FANTOM5:
76.2
Scaled Tags Per Million
Allen mouse:
4.7
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
583.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 544.3
2090
Male, age 80, both hemispheres
591.8
2188
Female, age 91, both hemispheres
576.0
2301
Female, age 85, both hemispheres
529.6
1984
Male, age 76, both hemispheres
479.9
Dorsal cochlear nucleus nTPM: 509.4
2802
Male, age 74, right hemisphere
582.9
2187
Female, age 91, both hemispheres
557.4
2370
Male, age 61, both hemispheres
498.8
2058
Male, age 76, both hemispheres
466.3
2378
Male, age 80, both hemispheres
441.7
Dorsal tegmental nucleus nTPM: 583.7
2358
Male, age 61, both hemispheres
660.9
2083
Male, age 80, both hemispheres
605.6
2326
Male, age 74, both hemispheres
582.2
1936
Male, age 76, left hemisphere
486.2
Dorsolateral tegmental area nTPM: 556.4
2337
Male, age 61, both hemispheres
716.9
2654
Male, age 80, both hemispheres
651.7
2751
Female, age 85, both hemispheres
512.1
2141
Male, age 76, both hemispheres
452.4
2360
Male, age 74, both hemispheres
449.0
Kolliker-Fuse nucleus nTPM: 567.2
2315
Male, age 76, right hemisphere
590.3
2793
Female, age 91, left hemisphere
556.6
2163
Male, age 80, both hemispheres
554.5
Lateral lemniscal nuclei nTPM: 466.8
2746
Female, age 85, left hemisphere
528.5
2169
Male, age 76, both hemispheres
519.7
2320
Female, age 91, left hemisphere
504.7
2453
Male, age 74, right hemisphere
416.7
2036
Male, age 80, both hemispheres
364.2
Lateral parabrachial nucleus nTPM: 571.5
2013
Male, age 80, both hemispheres
600.5
2792
Male, age 76, both hemispheres
594.9
2139
Female, age 85, right hemisphere
577.8
2790
Male, age 61, both hemispheres
512.9
Lateral vestibular nucleus nTPM: 562.1
2311
Male, age 80, both hemispheres
637.0
2184
Male, age 76, both hemispheres
487.2
Locus coeruleus nTPM: 457.5
2720
Male, age 74, both hemispheres
533.5
2123
Female, age 91, both hemispheres
524.1
2162
Male, age 80, both hemispheres
489.7
2014
Male, age 55, unknown
469.5
1980
Male, age 76, both hemispheres
446.7
2317
Female, age 72, unknown
418.9
2788
Male, age 74, unknown
320.1
Medial parabrachial nucleus nTPM: 551.7
2170
Female, age 91, both hemispheres
631.8
2854
Male, age 80, both hemispheres
555.9
2156
Male, age 61, both hemispheres
542.9
2463
Female, age 85, right hemisphere
518.5
2786
Male, age 76, both hemispheres
509.4
Medial periolivary nuclei nTPM: 475.1
2063
Male, age 76, both hemispheres
563.9
2081
Male, age 80, both hemispheres
505.3
2171
Female, age 85, both hemispheres
463.1
2458
Female, age 91, both hemispheres
447.7
2791
Male, age 74, right hemisphere
395.6
Motor facial nucleus nTPM: 482.5
2062
Male, age 76, both hemispheres
560.2
2126
Male, age 61, both hemispheres
515.4
2697
Female, age 85, both hemispheres
502.8
2795
Female, age 91, both hemispheres
461.6
2365
Male, age 74, right hemisphere
448.3
2327
Male, age 80, both hemispheres
406.5
Motor trigeminal nucleus nTPM: 509.8
2335
Male, age 61, both hemispheres
579.6
2560
Male, age 74, both hemispheres
526.3
2309
Male, age 76, both hemispheres
488.1
2321
Female, age 91, both hemispheres
486.6
2079
Male, age 80, both hemispheres
468.4
Nuclei of the trapezoid body nTPM: 499.8
1983
Male, age 76, both hemispheres
678.1
2166
Male, age 80, both hemispheres
482.0
2735
Female, age 85, both hemispheres
480.3
2159
Male, age 61, both hemispheres
453.9
2368
Female, age 91, both hemispheres
404.6
Nucleus raphe magnus nTPM: 467.2
2051
Male, age 76, both hemispheres
534.7
2455
Male, age 74, both hemispheres
466.4
2172
Female, age 85, both hemispheres
459.9
2328
Male, age 80, both hemispheres
454.9
2160
Male, age 61, both hemispheres
451.6
2459
Female, age 91, both hemispheres
435.8
Paramedian reticular nucleus nTPM: 478.7
2057
Male, age 80, both hemispheres
517.4
2052
Male, age 76, both hemispheres
471.6
2313
Male, age 61, both hemispheres
470.8
2050
Female, age 85, both hemispheres
455.0
Pedunculopontine tegmental nucleus nTPM: 517.9
2338
Male, age 61, both hemispheres
576.4
2334
Male, age 80, both hemispheres
551.6
1921
Female, age 85, both hemispheres
425.7
Pontine nuclei nTPM: 537.5
2787
Female, age 85, both hemispheres
669.0
1968
Male, age 76, left hemisphere
589.2
1863
Male, age 55, unknown
566.9
2319
Female, age 91, both hemispheres
547.5
2109
Female, age 72, unknown
520.1
2115
Male, age 80, left hemisphere
517.5
2454
Male, age 74, left hemisphere
471.9
2727
Male, age 61, right hemisphere
418.2
Pontine raphe nucleus nTPM: 482.1
2122
Female, age 85, midline
525.2
2853
Male, age 76, midline
439.1
Posteroventral cochlear nucleus nTPM: 553.8
2135
Female, age 91, both hemispheres
607.6
2341
Male, age 80, both hemispheres
578.3
2070
Male, age 76, both hemispheres
550.2
2371
Male, age 61, both hemispheres
538.8
2752
Female, age 85, both hemispheres
494.2
Principal sensory trigeminal nucleus nTPM: 464.1
2324
Male, age 76, both hemispheres
484.2
2367
Female, age 91, left hemisphere
473.0
2158
Male, age 61, both hemispheres
471.7
2008
Male, age 80, left hemisphere
427.6
Reticular pontine nucleus, caudal nTPM: 508.8
2092
Male, age 76, both hemispheres
583.8
2559
Male, age 74, both hemispheres
559.4
2457
Female, age 91, both hemispheres
470.1
2332
Male, age 80, right hemisphere
422.0
Reticular pontine nucleus, oral nTPM: 508.8
2366
Female, age 91, both hemispheres
570.6
2167
Male, age 76, both hemispheres
533.1
1939
Male, age 80, both hemispheres
495.4
2361
Male, age 74, both hemispheres
479.3
2012
Female, age 85, both hemispheres
465.5
Reticulotegmental nucleus nTPM: 493.3
2452
Male, age 74, both hemispheres
585.3
2322
Female, age 91, both hemispheres
490.2
2333
Male, age 80, both hemispheres
468.2
2325
Male, age 76, both hemispheres
429.7
Spinal trigeminal nucleus, oral nTPM: 488.3
2164
Male, age 80, both hemispheres
513.2
1978
Male, age 76, both hemispheres
493.1
2737
Female, age 85, both hemispheres
458.7
Subcoeruleus area nTPM: 509.0
2451
Male, age 74, both hemispheres
593.4
2369
Female, age 85, left hemisphere
492.5
2089
Male, age 76, left hemisphere
488.5
1958
Male, age 80, both hemispheres
485.6
2323
Female, age 91, left hemisphere
484.9
Superior olive nTPM: 478.8
2020
Male, age 76, both hemispheres
622.9
2561
Female, age 91, both hemispheres
494.7
1875
Female, age 85, both hemispheres
450.9
2329
Male, age 80, right hemisphere
428.8
2364
Male, age 74, right hemisphere
396.7
Ventral periolivary nuclei nTPM: 484.2
2023
Male, age 76, both hemispheres
567.5
2165
Male, age 80, both hemispheres
480.1
2130
Female, age 85, both hemispheres
466.6
2794
Female, age 91, left hemisphere
422.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 472.3
2161
Male, age 80, both hemispheres
512.3
1959
Male, age 76, both hemispheres
505.0
2840
Female, age 85, both hemispheres
490.5
2359
Male, age 61, both hemispheres
470.2
2449
Male, age 74, both hemispheres
431.2
2456
Female, age 91, both hemispheres
424.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
