PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:629.0 nTPM
FANTOM5:76.2 Scaled Tags Per Million
Mouse:1685.4 nTPM
Allen mouse:4.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 629.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 544.3
2090 Male, age 80, both hemispheres 591.8
2188 Female, age 91, both hemispheres 576.0
2301 Female, age 85, both hemispheres 529.6
1984 Male, age 76, both hemispheres 479.9
Area postrema
nTPM: 589.1
2799 Male, age 61, both hemispheres 720.6
2306 Male, age 80, both hemispheres 658.8
2054 Male, age 76, both hemispheres 387.9
Dorsal cochlear nucleus
nTPM: 509.4
2802 Male, age 74, right hemisphere 582.9
2187 Female, age 91, both hemispheres 557.4
2370 Male, age 61, both hemispheres 498.8
2058 Male, age 76, both hemispheres 466.3
2378 Male, age 80, both hemispheres 441.7
Dorsal medullary reticular nucleus
nTPM: 483.0
2373 Male, age 61, both hemispheres 494.0
2040 Female, age 85, both hemispheres 492.1
2088 Male, age 76, both hemispheres 463.0
Dorsal motor vagal complex
nTPM: 576.7
2797 Male, age 61, both hemispheres 778.0
2643 Male, age 74, both hemispheres 659.1
2000 Male, age 74, unknown 557.5
2813 Female, age 72, unknown 544.7
2185 Male, age 76, both hemispheres 540.3
2844 Male, age 55, unknown 531.3
2807 Female, age 85, both hemispheres 501.3
2133 Female, age 91, both hemispheres 501.2
Dorsal tegmental nucleus
nTPM: 583.7
2358 Male, age 61, both hemispheres 660.9
2083 Male, age 80, both hemispheres 605.6
2326 Male, age 74, both hemispheres 582.2
1936 Male, age 76, left hemisphere 486.2
Dorsolateral tegmental area
nTPM: 556.4
2337 Male, age 61, both hemispheres 716.9
2654 Male, age 80, both hemispheres 651.7
2751 Female, age 85, both hemispheres 512.1
2141 Male, age 76, both hemispheres 452.4
2360 Male, age 74, both hemispheres 449.0
Gigantocellular reticular nuclei, medullary
nTPM: 494.6
2314 Male, age 61, both hemispheres 659.0
2022 Male, age 76, right hemisphere 512.2
2310 Male, age 80, both hemispheres 499.6
1876 Female, age 85, both hemispheres 445.6
2462 Male, age 74, both hemispheres 432.1
2387 Female, age 91, both hemispheres 418.8
Gigantocellular reticular nuclei, pars
nTPM: 484.6
2084 Female, age 85, both hemispheres 506.9
2336 Male, age 61, both hemispheres 495.0
2168 Male, age 76, both hemispheres 493.0
2330 Male, age 80, both hemispheres 466.0
2706 Male, age 80, both hemispheres 462.5
Inferior olive
nTPM: 594.2
2563 Male, age 74, both hemispheres 668.9
2628 Female, age 91, both hemispheres 658.7
2178 Male, age 61, both hemispheres 606.0
2085 Female, age 85, both hemispheres 573.9
2379 Male, age 80, both hemispheres 463.5
Kolliker-Fuse nucleus
nTPM: 567.2
2315 Male, age 76, right hemisphere 590.3
2793 Female, age 91, left hemisphere 556.6
2163 Male, age 80, both hemispheres 554.5
Lateral lemniscal nuclei
nTPM: 466.8
2746 Female, age 85, left hemisphere 528.5
2169 Male, age 76, both hemispheres 519.7
2320 Female, age 91, left hemisphere 504.7
2453 Male, age 74, right hemisphere 416.7
2036 Male, age 80, both hemispheres 364.2
Lateral medullary reticular nucleus
nTPM: 558.8
2852 Male, age 80, both hemispheres 643.8
2374 Male, age 61, both hemispheres 564.2
2804 Female, age 91, both hemispheres 563.2
2190 Female, age 85, both hemispheres 554.0
2305 Male, age 74, both hemispheres 522.5
2044 Male, age 76, both hemispheres 505.0
Lateral parabrachial nucleus
nTPM: 571.5
2013 Male, age 80, both hemispheres 600.5
2792 Male, age 76, both hemispheres 594.9
2139 Female, age 85, right hemisphere 577.8
2790 Male, age 61, both hemispheres 512.9
Lateral vestibular nucleus
nTPM: 562.1
2311 Male, age 80, both hemispheres 637.0
2184 Male, age 76, both hemispheres 487.2
Locus coeruleus
nTPM: 457.5
2720 Male, age 74, both hemispheres 533.5
2123 Female, age 91, both hemispheres 524.1
2162 Male, age 80, both hemispheres 489.7
2014 Male, age 55, unknown 469.5
1980 Male, age 76, both hemispheres 446.7
2317 Female, age 72, unknown 418.9
2788 Male, age 74, unknown 320.1
Medial olivary nucleus
nTPM: 610.8
1943 Male, age 61, both hemispheres 639.6
2138 Female, age 91, both hemispheres 614.9
1962 Male, age 76, both hemispheres 601.3
2851 Male, age 80, both hemispheres 587.2
Medial parabrachial nucleus
nTPM: 551.7
2170 Female, age 91, both hemispheres 631.8
2854 Male, age 80, both hemispheres 555.9
2156 Male, age 61, both hemispheres 542.9
2463 Female, age 85, right hemisphere 518.5
2786 Male, age 76, both hemispheres 509.4
Medial periolivary nuclei
nTPM: 475.1
2063 Male, age 76, both hemispheres 563.9
2081 Male, age 80, both hemispheres 505.3
2171 Female, age 85, both hemispheres 463.1
2458 Female, age 91, both hemispheres 447.7
2791 Male, age 74, right hemisphere 395.6
Medial vestibular nucleus
nTPM: 501.5
2624 Male, age 61, both hemispheres 578.3
2801 Male, age 74, both hemispheres 523.7
2803 Female, age 91, both hemispheres 504.1
2093 Male, age 80, both hemispheres 501.9
2743 Female, age 85, both hemispheres 471.5
2134 Male, age 76, both hemispheres 429.2
Motor facial nucleus
nTPM: 482.5
2062 Male, age 76, both hemispheres 560.2
2126 Male, age 61, both hemispheres 515.4
2697 Female, age 85, both hemispheres 502.8
2795 Female, age 91, both hemispheres 461.6
2365 Male, age 74, right hemisphere 448.3
2327 Male, age 80, both hemispheres 406.5
Motor hypoglossal nucleus
nTPM: 536.9
2182 Male, age 80, both hemispheres 707.1
2132 Female, age 85, both hemispheres 560.0
2125 Female, age 91, both hemispheres 557.0
2461 Male, age 61, both hemispheres 444.9
2277 Male, age 76, both hemispheres 415.6
Motor trigeminal nucleus
nTPM: 509.8
2335 Male, age 61, both hemispheres 579.6
2560 Male, age 74, both hemispheres 526.3
2309 Male, age 76, both hemispheres 488.1
2321 Female, age 91, both hemispheres 486.6
2079 Male, age 80, both hemispheres 468.4
Nuclei of the trapezoid body
nTPM: 499.8
1983 Male, age 76, both hemispheres 678.1
2166 Male, age 80, both hemispheres 482.0
2735 Female, age 85, both hemispheres 480.3
2159 Male, age 61, both hemispheres 453.9
2368 Female, age 91, both hemispheres 404.6
Nucleus ambiguus
nTPM: 584.2
2071 Male, age 76, both hemispheres 609.2
2096 Female, age 85, both hemispheres 559.2
Nucleus cuneatus
nTPM: 512.7
2564 Male, age 74, both hemispheres 605.8
2805 Female, age 91, both hemispheres 554.1
2562 Male, age 61, both hemispheres 550.3
2808 Female, age 85, both hemispheres 549.6
2380 Male, age 80, both hemispheres 513.3
2381 Male, age 80, both hemispheres 512.4
2376 Male, age 61, both hemispheres 468.6
2131 Male, age 76, both hemispheres 439.6
2100 Male, age 76, both hemispheres 420.9
Nucleus gracilis
nTPM: 629.0
2627 Male, age 74, both hemispheres 648.8
2382 Male, age 80, both hemispheres 626.3
2299 Female, age 85, both hemispheres 611.8
Nucleus raphe magnus
nTPM: 467.2
2051 Male, age 76, both hemispheres 534.7
2455 Male, age 74, both hemispheres 466.4
2172 Female, age 85, both hemispheres 459.9
2328 Male, age 80, both hemispheres 454.9
2160 Male, age 61, both hemispheres 451.6
2459 Female, age 91, both hemispheres 435.8
Nucleus raphe obscurus
nTPM: 578.7
2142 Male, age 76, midline 614.6
2845 Female, age 85, midline 577.8
2800 Male, age 61, midline 543.9
Nucleus raphe pallidus
nTPM: 583.6
1924 Male, age 61, midline 637.1
2183 Male, age 80, midline 577.3
2145 Male, age 76, midline 536.5
Nucleus tractus solitarii
nTPM: 417.0
2191 Female, age 85, both hemispheres 493.0
2656 Male, age 76, both hemispheres 437.6
2307 Male, age 80, both hemispheres 433.6
2144 Female, age 91, right hemisphere 303.9
Paramedian reticular nucleus
nTPM: 478.7
2057 Male, age 80, both hemispheres 517.4
2052 Male, age 76, both hemispheres 471.6
2313 Male, age 61, both hemispheres 470.8
2050 Female, age 85, both hemispheres 455.0
Parvicellular reticular nuclei
nTPM: 505.2
2119 Male, age 80, both hemispheres 526.9
2095 Male, age 76, both hemispheres 523.7
2558 Male, age 74, both hemispheres 464.9
Parvicellular reticular nuclei, medullary
nTPM: 520.2
2189 Female, age 91, both hemispheres 545.6
2181 Male, age 80, left hemisphere 519.9
2091 Female, age 85, both hemispheres 495.0
Pedunculopontine tegmental nucleus
nTPM: 517.9
2338 Male, age 61, both hemispheres 576.4
2334 Male, age 80, both hemispheres 551.6
1921 Female, age 85, both hemispheres 425.7
Peritrigeminal nucleus
nTPM: 582.1
2067 Female, age 85, both hemispheres 685.9
2136 Male, age 76, both hemispheres 561.6
2179 Male, age 61, both hemispheres 498.9
Pontine nuclei
nTPM: 537.5
2787 Female, age 85, both hemispheres 669.0
1968 Male, age 76, left hemisphere 589.2
1863 Male, age 55, unknown 566.9
2319 Female, age 91, both hemispheres 547.5
2109 Female, age 72, unknown 520.1
2115 Male, age 80, left hemisphere 517.5
2454 Male, age 74, left hemisphere 471.9
2727 Male, age 61, right hemisphere 418.2
Pontine raphe nucleus
nTPM: 482.1
2122 Female, age 85, midline 525.2
2853 Male, age 76, midline 439.1
Posteroventral cochlear nucleus
nTPM: 553.8
2135 Female, age 91, both hemispheres 607.6
2341 Male, age 80, both hemispheres 578.3
2070 Male, age 76, both hemispheres 550.2
2371 Male, age 61, both hemispheres 538.8
2752 Female, age 85, both hemispheres 494.2
Prepositus hypoglossal nucleus
nTPM: 520.8
2086 Male, age 80, both hemispheres 536.8
2855 Female, age 85, right hemisphere 504.9
Principal sensory trigeminal nucleus
nTPM: 464.1
2324 Male, age 76, both hemispheres 484.2
2367 Female, age 91, left hemisphere 473.0
2158 Male, age 61, both hemispheres 471.7
2008 Male, age 80, left hemisphere 427.6
Reticular pontine nucleus, caudal
nTPM: 508.8
2092 Male, age 76, both hemispheres 583.8
2559 Male, age 74, both hemispheres 559.4
2457 Female, age 91, both hemispheres 470.1
2332 Male, age 80, right hemisphere 422.0
Reticular pontine nucleus, oral
nTPM: 508.8
2366 Female, age 91, both hemispheres 570.6
2167 Male, age 76, both hemispheres 533.1
1939 Male, age 80, both hemispheres 495.4
2361 Male, age 74, both hemispheres 479.3
2012 Female, age 85, both hemispheres 465.5
Reticulotegmental nucleus
nTPM: 493.3
2452 Male, age 74, both hemispheres 585.3
2322 Female, age 91, both hemispheres 490.2
2333 Male, age 80, both hemispheres 468.2
2325 Male, age 76, both hemispheres 429.7
Spinal trigeminal nucleus, caudal
nTPM: 536.7
2312 Male, age 61, both hemispheres 569.7
2308 Male, age 80, both hemispheres 567.8
2642 Male, age 74, both hemispheres 557.8
2390 Female, age 91, both hemispheres 496.8
2447 Male, age 76, both hemispheres 491.7
Spinal trigeminal nucleus, interpolar
nTPM: 512.7
2033 Male, age 80, both hemispheres 554.4
2066 Male, age 76, right hemisphere 532.2
2389 Female, age 91, both hemispheres 510.9
2625 Male, age 61, both hemispheres 496.1
2386 Female, age 85, both hemispheres 469.6
Spinal trigeminal nucleus, oral
nTPM: 488.3
2164 Male, age 80, both hemispheres 513.2
1978 Male, age 76, both hemispheres 493.1
2737 Female, age 85, both hemispheres 458.7
Spinal vestibular nucleus
nTPM: 563.3
2384 Male, age 74, both hemispheres 642.7
2780 Male, age 80, both hemispheres 612.5
2748 Male, age 76, both hemispheres 548.7
2186 Female, age 91, both hemispheres 529.9
2796 Male, age 61, both hemispheres 524.6
2806 Female, age 85, both hemispheres 521.7
Subcoeruleus area
nTPM: 509.0
2451 Male, age 74, both hemispheres 593.4
2369 Female, age 85, left hemisphere 492.5
2089 Male, age 76, left hemisphere 488.5
1958 Male, age 80, both hemispheres 485.6
2323 Female, age 91, left hemisphere 484.9
Superior olive
nTPM: 478.8
2020 Male, age 76, both hemispheres 622.9
2561 Female, age 91, both hemispheres 494.7
1875 Female, age 85, both hemispheres 450.9
2329 Male, age 80, right hemisphere 428.8
2364 Male, age 74, right hemisphere 396.7
Superior vestibular nucleus
nTPM: 555.2
2015 Male, age 80, both hemispheres 604.5
2061 Male, age 76, both hemispheres 538.3
2383 Male, age 74, both hemispheres 522.8
Ventral medullary reticular nucleus
nTPM: 514.3
2060 Male, age 76, both hemispheres 522.5
2372 Male, age 61, both hemispheres 506.2
Ventral periolivary nuclei
nTPM: 484.2
2023 Male, age 76, both hemispheres 567.5
2165 Male, age 80, both hemispheres 480.1
2130 Female, age 85, both hemispheres 466.6
2794 Female, age 91, left hemisphere 422.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 563.6
2118 Male, age 80, both hemispheres 604.0
2302 Female, age 91, both hemispheres 590.4
1986 Male, age 76, both hemispheres 542.9
2741 Female, age 85, both hemispheres 541.1
2180 Male, age 61, both hemispheres 539.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 472.3
2161 Male, age 80, both hemispheres 512.3
1959 Male, age 76, both hemispheres 505.0
2840 Female, age 85, both hemispheres 490.5
2359 Male, age 61, both hemispheres 470.2
2449 Male, age 74, both hemispheres 431.2
2456 Female, age 91, both hemispheres 424.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 76.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 55.0
FF:10182-103D2 60 years, female 58.9
FF:10165-103B3 76 years, female 51.2
Medulla oblongata
Scaled Tags Per Million: 70.4
FF:10174-103C3 60 years, female 91.9
FF:10038-101F2 18-64 years, mixed 79.1
FF:10155-103A2 76 years, female 40.1
Pons
Scaled Tags Per Million: 76.2
FF:10033-101E6 18-54 years, mixed 76.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1685.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1685.4
Samples: 4

Max nTPM: 1817.2
Min nTPM: 1471.6
Sample A Male 1815.9
Sample B Male 1471.6
Sample C Female 1817.2
Sample D Female 1637.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.0
75774687 Antisense, RP_060530_01_D12, Mouse strain C57BL/6J (56 days, male) 6.3
68321982 Antisense, RP_041207_01_B08, Mouse strain C57BL/6J (56 days, male) 1.7
Pons
Expression energy: 4.7
75774687 Antisense, RP_060530_01_D12, Mouse strain C57BL/6J (56 days, male) 5.9
68321982 Antisense, RP_041207_01_B08, Mouse strain C57BL/6J (56 days, male) 3.4

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