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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:38.5 nTPM
HPA Brain:125.5 nTPM
GTEx:38.5 nTPM
FANTOM5:158.5 Scaled Tags Per Million
Pig:76.0 nTPM
Mouse:56.2 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017981Antibody HPA063005Antibody CAB037247
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 48.5
1781 Male, age 74, unknown 62.6
2290 Female, age 72, unknown 60.8
1857 Female, age 85, left hemisphere 60.3
2289 Male, age 61, right hemisphere 49.2
2846 Female, age 79, unknown 46.6
1854 Male, age 80, left hemisphere 46.0
2288 Male, age 75, left hemisphere 40.3
2481 Female, age 94, left hemisphere 22.2
Globus pallidus, externus
nTPM: 95.5
2772 Female, age 79, unknown 130.0
1996 Male, age 80, right hemisphere 115.2
2395 Male, age 75, both hemispheres 94.4
2646 Male, age 61, right hemisphere 81.8
2567 Female, age 72, unknown 55.9
Globus pallidus, internus
nTPM: 125.5
2778 Female, age 91, both hemispheres 209.7
2111 Female, age 85, right hemisphere 198.4
2287 Male, age 75, right hemisphere 136.8
1818 Male, age 74, unknown 114.0
2037 Male, age 80, right hemisphere 106.3
2566 Female, age 72, unknown 83.3
2483 Female, age 94, right hemisphere 30.2
Nucleus accumbens
nTPM: 67.4
2391 Female, age 94, left hemisphere 95.8
2824 Male, age 61, right hemisphere 91.4
1806 Female, age 85, left hemisphere 70.0
2698 Female, age 72, unknown 69.8
1783 Male, age 74, unknown 67.6
1856 Female, age 91, right hemisphere 60.2
2732 Male, age 80, right hemisphere 45.9
2286 Male, age 75, left hemisphere 38.9
Nucleus basalis of Meynert
nTPM: 61.2
2821 Male, age 75, both hemispheres 77.7
2569 Male, age 61, both hemispheres 63.7
2393 Male, age 80, right hemisphere 52.9
2484 Female, age 94, left hemisphere 50.7
Nucleus of the diagonal band
nTPM: 79.2
1812 Female, age 91, both hemispheres 137.8
2195 Female, age 85, both hemispheres 78.1
2029 Male, age 61, right hemisphere 75.8
2775 Male, age 80, right hemisphere 74.1
1979 Male, age 74, unknown 30.3
Putamen
nTPM: 48.4
1829 Male, age 74, unknown 58.6
1937 Female, age 91, right hemisphere 58.2
1838 Male, age 80, right hemisphere 51.2
2647 Male, age 75, left hemisphere 50.5
2466 Female, age 79, unknown 48.1
2489 Female, age 72, unknown 38.2
2482 Female, age 94, left hemisphere 34.2
Septal nuclei
nTPM: 75.4
2394 Male, age 61, left hemisphere 104.3
2031 Female, age 72, unknown 95.0
2629 Female, age 94, right hemisphere 81.2
1960 Male, age 74, unknown 77.6
2059 Female, age 85, both hemispheres 66.6
2009 Female, age 91, both hemispheres 58.3
2199 Male, age 80, right hemisphere 44.8
Stria terminalis, bed nucleus
nTPM: 69.1
2486 Female, age 94, both hemispheres 81.5
1974 Female, age 91, both hemispheres 77.3
2201 Male, age 74, unknown 48.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 28.6
Samples: 246

Max nTPM: 111.4
Min nTPM: 3.3
Std nTPM: 17.9
Median nTPM: 26.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 111.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 90.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 87.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 66.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 65.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 65.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 63.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 60.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 60.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 59.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 59.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 57.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 56.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 56.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 55.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 53.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 52.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 52.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 51.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 51.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 50.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 49.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 46.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 46.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 44.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 44.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 43.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 43.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 42.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 42.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 42.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 41.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 41.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 41.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 41.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 40.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 40.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 40.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 39.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 39.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 39.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 39.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 39.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 38.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 38.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 38.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 38.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 38.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 38.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 38.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 37.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 37.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 36.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 36.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 35.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 35.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 35.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 35.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 35.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 35.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 35.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 35.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 34.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 34.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 34.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 34.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 34.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 34.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 33.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 33.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 33.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 33.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 33.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 32.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 32.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 32.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 31.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 31.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 31.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 31.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 31.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 31.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 31.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 31.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 31.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 30.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 30.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 30.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 30.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 30.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 30.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 29.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 29.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 29.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 29.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 28.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 28.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 27.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 26.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 26.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 26.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 26.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 26.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 26.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 25.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 25.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 25.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 25.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 25.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 24.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 24.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 24.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 23.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 23.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 23.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 23.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 23.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 22.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 22.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 22.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 22.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 22.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 22.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 21.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 21.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 20.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 20.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 20.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 20.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 19.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 19.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 19.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 19.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 18.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 18.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 18.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 18.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 17.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 17.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 17.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 17.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 16.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 16.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 16.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 16.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 16.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 16.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 16.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 16.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 15.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 15.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 15.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 15.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 15.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 15.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 14.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 13.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 13.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 13.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 12.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 12.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 12.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 11.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 11.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 11.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 11.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 11.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 11.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 11.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 10.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 10.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 10.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 10.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 10.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 10.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 9.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 9.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 9.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 9.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 8.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 8.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 8.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 7.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 7.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 7.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 7.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 6.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 5.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 5.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 5.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 4.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 3.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 3.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 38.5
Samples: 246

Max nTPM: 145.5
Min nTPM: 3.4
Std nTPM: 22.3
Median nTPM: 38.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 145.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 111.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 98.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 86.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 86.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 85.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 82.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 81.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 81.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 78.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 77.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 76.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 75.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 73.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 72.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 72.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 71.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 70.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 69.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 69.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 68.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 67.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 67.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 67.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 66.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 65.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 64.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 64.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 64.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 63.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 62.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 61.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 61.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 61.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 61.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 61.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 60.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 60.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 60.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 59.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 59.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 59.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 59.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 57.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 57.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 57.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 57.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 57.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 57.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 57.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 56.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 56.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 56.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 55.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 55.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 55.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 54.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 53.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 52.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 51.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 51.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 51.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 51.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 50.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 50.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 50.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 50.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 49.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 49.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 49.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 48.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 48.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 48.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 48.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 48.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 48.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 47.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 47.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 47.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 46.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 46.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 46.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 46.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 45.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 45.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 45.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 45.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 44.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 44.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 44.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 43.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 42.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 42.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 42.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 41.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 41.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 41.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 41.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 40.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 40.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 40.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 40.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 39.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 39.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 39.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 39.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 38.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 38.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 38.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 38.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 38.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 38.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 38.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 38.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 38.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 37.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 37.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 37.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 36.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 36.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 36.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 36.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 36.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 35.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 35.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 35.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 34.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 34.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 34.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 33.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 33.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 33.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 33.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 33.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 32.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 32.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 32.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 32.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 32.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 31.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 31.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 31.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 30.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 30.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 30.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 30.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 30.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 30.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 29.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 29.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 29.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 29.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 29.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 28.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 28.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 28.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 28.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 27.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 27.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 27.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 27.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 26.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 24.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 23.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 23.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 23.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 22.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 22.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 22.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 22.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 22.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 22.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 21.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 21.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 20.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 20.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 19.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 19.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 18.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 18.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 18.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 18.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 18.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 18.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 17.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 16.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 16.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 16.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 15.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 15.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 15.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 15.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 13.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 13.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 13.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 13.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 11.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 11.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 10.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 10.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 9.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 9.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 9.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 8.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 8.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 7.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 7.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 7.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 5.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 5.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 5.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 5.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 5.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 5.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 5.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 5.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 4.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 4.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 3.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 3.4
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Brain - Putamen (basal ganglia)
Average nTPM: 27.8
Samples: 205

Max nTPM: 164.3
Min nTPM: 3.2
Std nTPM: 18.4
Median nTPM: 25.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 164.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 73.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 73.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 72.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 68.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 63.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 62.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 56.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 55.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 54.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 52.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 52.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 52.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 51.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 51.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 50.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 50.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 49.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 48.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 47.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 47.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 46.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 45.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 45.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 45.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 44.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 44.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 43.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 42.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 42.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 42.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 42.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 41.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 41.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 40.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 40.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 40.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 39.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 39.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 39.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 39.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 38.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 38.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 37.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 37.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 37.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 36.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 36.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 36.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 35.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 35.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 35.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 35.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 34.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 33.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 33.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 32.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 32.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 32.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 32.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 32.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 32.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 30.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 30.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 30.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 30.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 30.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 28.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 28.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 28.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 27.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 27.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 27.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 27.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 27.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 26.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 26.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 26.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 26.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 26.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 26.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 26.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 26.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 26.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 25.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 25.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 25.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 24.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 24.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 23.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 23.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 23.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 23.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 22.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 22.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 22.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 22.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 22.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 22.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 21.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 20.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 20.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 20.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 20.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 19.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 19.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 19.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 19.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 19.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 18.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 18.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 18.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 18.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 17.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 17.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 17.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 16.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 16.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 16.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 15.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 15.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 15.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 15.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 15.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 15.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 15.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 15.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 14.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 14.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 14.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 14.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 13.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 13.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 13.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 13.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 12.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 12.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 12.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 12.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 12.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 12.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 12.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 12.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 11.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 11.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 10.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 10.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 10.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 10.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 8.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 8.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 8.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 7.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 4.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 4.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 4.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 4.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

158.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 47.0
FF:10164-103B2 76 years, female 47.0
Nucleus accumbens
Scaled Tags Per Million: 158.5
FF:10037-101F1 23-56 years, mixed 158.5
Putamen
Scaled Tags Per Million: 81.7
FF:10176-103C5 60 years, female 81.7
Globus pallidus
Scaled Tags Per Million: 89.1
FF:10161-103A8 76 years, female 124.8
FF:10175-103C4 60 years, female 53.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.0
Pig sample Sample description nTPM
Caudate
nTPM: 65.9
Samples: 4

Max nTPM: 81.8
Min nTPM: 49.5
Sample A Female 49.5
Sample B Female 70.4
Sample C Male 81.8
Sample D Male 61.7
Putamen
nTPM: 54.8
Samples: 4

Max nTPM: 71.3
Min nTPM: 43.1
Sample A Female 47.1
Sample B Female 43.1
Sample C Male 57.6
Sample D Male 71.3
Septum
nTPM: 76.1
Samples: 4

Max nTPM: 127.5
Min nTPM: 57.1
Sample A Female 60.5
Sample B Female 57.1
Sample C Male 127.5
Sample D Male 59.1
Ventral pallidum
nTPM: 74.0
Samples: 4

Max nTPM: 127.3
Min nTPM: 51.8
Sample A Female 55.2
Sample B Female 51.8
Sample C Male 127.3
Sample D Male 61.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 52.3
Samples: 4

Max nTPM: 58.2
Min nTPM: 47.1
Sample A Male 47.3
Sample B Male 47.1
Sample C Female 56.5
Sample D Female 58.2
Septum
nTPM: 54.4
Samples: 4

Max nTPM: 59.7
Min nTPM: 44.5
Sample A Male 59.7
Sample B Male 44.5
Sample C Female 59.2
Sample D Female 54.3
Ventral forebrain
nTPM: 56.2
Samples: 4

Max nTPM: 58.5
Min nTPM: 53.7
Sample A Male 53.7
Sample B Male 57.2
Sample C Female 55.4
Sample D Female 58.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.5
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 3.0
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 1.9
Pallidum
Expression energy: 2.1
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 3.5
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 0.8

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