PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:462.4 nTPM
FANTOM5:348.7 Scaled Tags Per Million
Pig:130.1 nTPM
Mouse:63.9 nTPM
Allen mouse:7.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 462.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 342.1
2301 Female, age 85, both hemispheres 467.0
2188 Female, age 91, both hemispheres 418.2
2090 Male, age 80, both hemispheres 311.1
1984 Male, age 76, both hemispheres 171.9
Area postrema
nTPM: 159.3
2306 Male, age 80, both hemispheres 234.8
2799 Male, age 61, both hemispheres 123.5
2054 Male, age 76, both hemispheres 119.5
Dorsal cochlear nucleus
nTPM: 253.5
2187 Female, age 91, both hemispheres 463.1
2802 Male, age 74, right hemisphere 269.2
2378 Male, age 80, both hemispheres 212.5
2058 Male, age 76, both hemispheres 168.4
2370 Male, age 61, both hemispheres 154.4
Dorsal medullary reticular nucleus
nTPM: 235.2
2040 Female, age 85, both hemispheres 279.9
2373 Male, age 61, both hemispheres 241.8
2088 Male, age 76, both hemispheres 183.9
Dorsal motor vagal complex
nTPM: 147.3
2133 Female, age 91, both hemispheres 182.1
2000 Male, age 74, unknown 174.9
2844 Male, age 55, unknown 169.3
2185 Male, age 76, both hemispheres 166.1
2643 Male, age 74, both hemispheres 143.2
2807 Female, age 85, both hemispheres 135.5
2813 Female, age 72, unknown 112.9
2797 Male, age 61, both hemispheres 94.1
Dorsal tegmental nucleus
nTPM: 209.4
2326 Male, age 74, both hemispheres 304.6
2083 Male, age 80, both hemispheres 248.6
1936 Male, age 76, left hemisphere 157.3
2358 Male, age 61, both hemispheres 127.1
Dorsolateral tegmental area
nTPM: 207.2
2751 Female, age 85, both hemispheres 387.9
2654 Male, age 80, both hemispheres 230.8
2360 Male, age 74, both hemispheres 183.1
2141 Male, age 76, both hemispheres 127.8
2337 Male, age 61, both hemispheres 106.5
Gigantocellular reticular nuclei, medullary
nTPM: 286.1
2314 Male, age 61, both hemispheres 485.7
2387 Female, age 91, both hemispheres 374.7
1876 Female, age 85, both hemispheres 258.9
2310 Male, age 80, both hemispheres 252.6
2462 Male, age 74, both hemispheres 242.6
2022 Male, age 76, right hemisphere 102.2
Gigantocellular reticular nuclei, pars
nTPM: 241.2
2336 Male, age 61, both hemispheres 260.6
2168 Male, age 76, both hemispheres 251.5
2706 Male, age 80, both hemispheres 247.8
2330 Male, age 80, both hemispheres 239.0
2084 Female, age 85, both hemispheres 207.2
Inferior olive
nTPM: 297.7
2563 Male, age 74, both hemispheres 359.8
2178 Male, age 61, both hemispheres 331.2
2628 Female, age 91, both hemispheres 292.1
2085 Female, age 85, both hemispheres 270.7
2379 Male, age 80, both hemispheres 234.6
Kolliker-Fuse nucleus
nTPM: 242.4
2793 Female, age 91, left hemisphere 362.9
2163 Male, age 80, both hemispheres 194.7
2315 Male, age 76, right hemisphere 169.6
Lateral lemniscal nuclei
nTPM: 263.3
2320 Female, age 91, left hemisphere 301.4
2036 Male, age 80, both hemispheres 286.2
2453 Male, age 74, right hemisphere 282.0
2169 Male, age 76, both hemispheres 252.3
2746 Female, age 85, left hemisphere 194.6
Lateral medullary reticular nucleus
nTPM: 323.5
2305 Male, age 74, both hemispheres 400.2
2852 Male, age 80, both hemispheres 376.0
2190 Female, age 85, both hemispheres 353.1
2804 Female, age 91, both hemispheres 328.1
2374 Male, age 61, both hemispheres 270.4
2044 Male, age 76, both hemispheres 213.3
Lateral parabrachial nucleus
nTPM: 210.2
2013 Male, age 80, both hemispheres 224.0
2792 Male, age 76, both hemispheres 224.0
2790 Male, age 61, both hemispheres 215.9
2139 Female, age 85, right hemisphere 176.8
Lateral vestibular nucleus
nTPM: 268.3
2311 Male, age 80, both hemispheres 367.7
2184 Male, age 76, both hemispheres 168.9
Locus coeruleus
nTPM: 195.3
2123 Female, age 91, both hemispheres 230.2
2014 Male, age 55, unknown 228.7
2720 Male, age 74, both hemispheres 223.5
1980 Male, age 76, both hemispheres 189.8
2162 Male, age 80, both hemispheres 168.7
2317 Female, age 72, unknown 167.3
2788 Male, age 74, unknown 158.9
Medial olivary nucleus
nTPM: 318.6
1962 Male, age 76, both hemispheres 399.1
1943 Male, age 61, both hemispheres 312.5
2138 Female, age 91, both hemispheres 310.7
2851 Male, age 80, both hemispheres 252.0
Medial parabrachial nucleus
nTPM: 306.1
2170 Female, age 91, both hemispheres 592.9
2463 Female, age 85, right hemisphere 328.3
2854 Male, age 80, both hemispheres 267.5
2786 Male, age 76, both hemispheres 175.8
2156 Male, age 61, both hemispheres 165.8
Medial periolivary nuclei
nTPM: 267.1
2791 Male, age 74, right hemisphere 343.2
2458 Female, age 91, both hemispheres 284.0
2063 Male, age 76, both hemispheres 265.3
2081 Male, age 80, both hemispheres 229.5
2171 Female, age 85, both hemispheres 213.3
Medial vestibular nucleus
nTPM: 318.0
2801 Male, age 74, both hemispheres 658.5
2803 Female, age 91, both hemispheres 295.4
2093 Male, age 80, both hemispheres 277.5
2743 Female, age 85, both hemispheres 264.3
2624 Male, age 61, both hemispheres 244.9
2134 Male, age 76, both hemispheres 167.5
Motor facial nucleus
nTPM: 289.6
2365 Male, age 74, right hemisphere 376.6
2126 Male, age 61, both hemispheres 361.9
2795 Female, age 91, both hemispheres 296.9
2062 Male, age 76, both hemispheres 261.0
2697 Female, age 85, both hemispheres 221.6
2327 Male, age 80, both hemispheres 219.9
Motor hypoglossal nucleus
nTPM: 263.3
2125 Female, age 91, both hemispheres 428.4
2182 Male, age 80, both hemispheres 331.1
2132 Female, age 85, both hemispheres 294.7
2461 Male, age 61, both hemispheres 137.3
2277 Male, age 76, both hemispheres 124.9
Motor trigeminal nucleus
nTPM: 253.7
2560 Male, age 74, both hemispheres 407.7
2321 Female, age 91, both hemispheres 323.0
2079 Male, age 80, both hemispheres 227.5
2335 Male, age 61, both hemispheres 155.8
2309 Male, age 76, both hemispheres 154.6
Nuclei of the trapezoid body
nTPM: 288.3
2159 Male, age 61, both hemispheres 348.7
2368 Female, age 91, both hemispheres 323.9
2166 Male, age 80, both hemispheres 264.5
1983 Male, age 76, both hemispheres 256.9
2735 Female, age 85, both hemispheres 247.3
Nucleus ambiguus
nTPM: 268.6
2071 Male, age 76, both hemispheres 323.7
2096 Female, age 85, both hemispheres 213.6
Nucleus cuneatus
nTPM: 308.1
2380 Male, age 80, both hemispheres 429.0
2564 Male, age 74, both hemispheres 411.5
2808 Female, age 85, both hemispheres 410.1
2381 Male, age 80, both hemispheres 358.7
2376 Male, age 61, both hemispheres 345.2
2100 Male, age 76, both hemispheres 244.6
2805 Female, age 91, both hemispheres 221.3
2131 Male, age 76, both hemispheres 192.0
2562 Male, age 61, both hemispheres 160.1
Nucleus gracilis
nTPM: 332.6
2627 Male, age 74, both hemispheres 402.6
2382 Male, age 80, both hemispheres 393.5
2299 Female, age 85, both hemispheres 201.7
Nucleus raphe magnus
nTPM: 261.6
2160 Male, age 61, both hemispheres 332.0
2455 Male, age 74, both hemispheres 311.3
2459 Female, age 91, both hemispheres 295.7
2328 Male, age 80, both hemispheres 241.8
2172 Female, age 85, both hemispheres 209.0
2051 Male, age 76, both hemispheres 180.0
Nucleus raphe obscurus
nTPM: 462.4
2845 Female, age 85, midline 613.4
2800 Male, age 61, midline 423.4
2142 Male, age 76, midline 350.4
Nucleus raphe pallidus
nTPM: 355.5
2145 Male, age 76, midline 409.9
1924 Male, age 61, midline 343.7
2183 Male, age 80, midline 312.9
Nucleus tractus solitarii
nTPM: 109.0
2656 Male, age 76, both hemispheres 131.9
2144 Female, age 91, right hemisphere 116.9
2191 Female, age 85, both hemispheres 94.7
2307 Male, age 80, both hemispheres 92.5
Paramedian reticular nucleus
nTPM: 257.1
2057 Male, age 80, both hemispheres 301.1
2050 Female, age 85, both hemispheres 258.9
2052 Male, age 76, both hemispheres 245.3
2313 Male, age 61, both hemispheres 223.1
Parvicellular reticular nuclei
nTPM: 259.8
2119 Male, age 80, both hemispheres 279.8
2095 Male, age 76, both hemispheres 257.7
2558 Male, age 74, both hemispheres 242.0
Parvicellular reticular nuclei, medullary
nTPM: 203.9
2189 Female, age 91, both hemispheres 254.5
2091 Female, age 85, both hemispheres 195.6
2181 Male, age 80, left hemisphere 161.7
Pedunculopontine tegmental nucleus
nTPM: 164.3
2334 Male, age 80, both hemispheres 201.2
1921 Female, age 85, both hemispheres 165.6
2338 Male, age 61, both hemispheres 126.1
Peritrigeminal nucleus
nTPM: 328.5
2067 Female, age 85, both hemispheres 395.9
2179 Male, age 61, both hemispheres 330.1
2136 Male, age 76, both hemispheres 259.5
Pontine nuclei
nTPM: 291.8
2454 Male, age 74, left hemisphere 413.3
2727 Male, age 61, right hemisphere 344.2
2109 Female, age 72, unknown 329.9
2319 Female, age 91, both hemispheres 314.5
1863 Male, age 55, unknown 299.0
2787 Female, age 85, both hemispheres 248.8
1968 Male, age 76, left hemisphere 231.2
2115 Male, age 80, left hemisphere 153.6
Pontine raphe nucleus
nTPM: 182.2
2122 Female, age 85, midline 224.4
2853 Male, age 76, midline 139.9
Posteroventral cochlear nucleus
nTPM: 278.0
2341 Male, age 80, both hemispheres 418.6
2135 Female, age 91, both hemispheres 384.2
2070 Male, age 76, both hemispheres 214.2
2371 Male, age 61, both hemispheres 201.3
2752 Female, age 85, both hemispheres 172.0
Prepositus hypoglossal nucleus
nTPM: 391.0
2855 Female, age 85, right hemisphere 621.9
2086 Male, age 80, both hemispheres 160.0
Principal sensory trigeminal nucleus
nTPM: 266.5
2367 Female, age 91, left hemisphere 336.7
2158 Male, age 61, both hemispheres 316.4
2008 Male, age 80, left hemisphere 249.3
2324 Male, age 76, both hemispheres 163.5
Reticular pontine nucleus, caudal
nTPM: 314.1
2559 Male, age 74, both hemispheres 400.3
2457 Female, age 91, both hemispheres 364.3
2092 Male, age 76, both hemispheres 263.9
2332 Male, age 80, right hemisphere 228.0
Reticular pontine nucleus, oral
nTPM: 288.9
2361 Male, age 74, both hemispheres 510.3
2366 Female, age 91, both hemispheres 290.7
2012 Female, age 85, both hemispheres 259.6
1939 Male, age 80, both hemispheres 222.4
2167 Male, age 76, both hemispheres 161.3
Reticulotegmental nucleus
nTPM: 243.2
2322 Female, age 91, both hemispheres 364.9
2452 Male, age 74, both hemispheres 245.7
2333 Male, age 80, both hemispheres 193.6
2325 Male, age 76, both hemispheres 168.5
Spinal trigeminal nucleus, caudal
nTPM: 259.1
2312 Male, age 61, both hemispheres 323.0
2308 Male, age 80, both hemispheres 270.7
2390 Female, age 91, both hemispheres 237.1
2447 Male, age 76, both hemispheres 234.8
2642 Male, age 74, both hemispheres 230.0
Spinal trigeminal nucleus, interpolar
nTPM: 205.6
2066 Male, age 76, right hemisphere 257.1
2389 Female, age 91, both hemispheres 220.9
2386 Female, age 85, both hemispheres 215.1
2033 Male, age 80, both hemispheres 204.0
2625 Male, age 61, both hemispheres 130.7
Spinal trigeminal nucleus, oral
nTPM: 177.5
2164 Male, age 80, both hemispheres 227.2
2737 Female, age 85, both hemispheres 168.5
1978 Male, age 76, both hemispheres 136.7
Spinal vestibular nucleus
nTPM: 255.7
2384 Male, age 74, both hemispheres 362.9
2806 Female, age 85, both hemispheres 297.4
2186 Female, age 91, both hemispheres 251.9
2748 Male, age 76, both hemispheres 238.5
2780 Male, age 80, both hemispheres 212.5
2796 Male, age 61, both hemispheres 171.2
Subcoeruleus area
nTPM: 225.9
2369 Female, age 85, left hemisphere 362.7
2089 Male, age 76, left hemisphere 232.6
1958 Male, age 80, both hemispheres 228.1
2323 Female, age 91, left hemisphere 158.3
2451 Male, age 74, both hemispheres 147.9
Superior olive
nTPM: 283.2
2364 Male, age 74, right hemisphere 373.7
1875 Female, age 85, both hemispheres 268.7
2329 Male, age 80, right hemisphere 267.6
2020 Male, age 76, both hemispheres 262.6
2561 Female, age 91, both hemispheres 243.3
Superior vestibular nucleus
nTPM: 256.2
2015 Male, age 80, both hemispheres 291.9
2383 Male, age 74, both hemispheres 250.3
2061 Male, age 76, both hemispheres 226.3
Ventral medullary reticular nucleus
nTPM: 263.3
2372 Male, age 61, both hemispheres 313.0
2060 Male, age 76, both hemispheres 213.7
Ventral periolivary nuclei
nTPM: 250.1
2023 Male, age 76, both hemispheres 287.6
2165 Male, age 80, both hemispheres 262.6
2130 Female, age 85, both hemispheres 241.2
2794 Female, age 91, left hemisphere 208.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 285.1
2118 Male, age 80, both hemispheres 315.8
2180 Male, age 61, both hemispheres 312.7
2741 Female, age 85, both hemispheres 298.9
2302 Female, age 91, both hemispheres 266.0
1986 Male, age 76, both hemispheres 232.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 245.5
2456 Female, age 91, both hemispheres 337.3
2449 Male, age 74, both hemispheres 297.3
1959 Male, age 76, both hemispheres 228.3
2840 Female, age 85, both hemispheres 216.6
2161 Male, age 80, both hemispheres 216.4
2359 Male, age 61, both hemispheres 177.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 348.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 224.2
FF:10165-103B3 76 years, female 238.3
FF:10182-103D2 60 years, female 210.0
Medulla oblongata
Scaled Tags Per Million: 262.7
FF:10038-101F2 18-64 years, mixed 366.4
FF:10155-103A2 76 years, female 277.4
FF:10174-103C3 60 years, female 144.4
Pons
Scaled Tags Per Million: 348.7
FF:10033-101E6 18-54 years, mixed 348.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 130.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 130.2
Samples: 4

Max nTPM: 143.2
Min nTPM: 100.0
Sample A Female 141.4
Sample B Female 100.0
Sample C Male 143.2
Sample D Male 136.0
Pons
nTPM: 102.5
Samples: 4

Max nTPM: 122.7
Min nTPM: 67.5
Sample A Female 67.5
Sample B Female 114.9
Sample C Male 122.7
Sample D Male 104.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 63.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 63.9
Samples: 4

Max nTPM: 65.5
Min nTPM: 60.1
Sample A Male 64.5
Sample B Male 60.1
Sample C Female 65.5
Sample D Female 65.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.3
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 9.2
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 5.3
Pons
Expression energy: 5.9
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 7.5
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 4.4

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