HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:46.7 nTPM
HPA Brain:204.4 nTPM
GTEx:46.7 nTPM
FANTOM5:328.5 Scaled Tags Per Million
Pig:241.1 nTPM
Mouse:202.6 nTPM
Allen mouse:17.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031182Antibody HPA054917
Glial cells LowNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 204.4
Sample id Sample description nTPM
Hippocampus
nTPM: 174.8
1898 Male, age 80, left hemisphere 248.7
1855 Male, age 76, left hemisphere 203.9
2621 Female, age 67, right hemisphere 181.2
2148 Female, age 91, left hemisphere 154.5
1911 Female, age 85, right hemisphere 141.8
2529 Female, age 94, left hemisphere 118.5
Dentate gyrus
nTPM: 193.2
2010 Male, age 76, both hemispheres 230.2
2530 Female, age 94, left hemisphere 224.9
1927 Female, age 91, both hemispheres 223.0
2246 Female, age 85, both hemispheres 181.7
2531 Female, age 67, both hemispheres 155.1
2528 Male, age 74, both hemispheres 144.2
Entorhinal gyrus
nTPM: 168.8
2764 Male, age 80, right hemisphere 202.5
1938 Female, age 85, left hemisphere 187.0
2613 Female, age 94, left hemisphere 173.3
1787 Male, age 76, left hemisphere 166.7
2117 Female, age 91, right hemisphere 151.6
2686 Male, age 75, right hemisphere 131.4
Hippocampus, CA1
nTPM: 195.3
2749 Male, age 80, left hemisphere 278.7
1873 Female, age 85, both hemispheres 238.4
2045 Male, age 76, both hemispheres 194.9
2527 Male, age 74, both hemispheres 148.3
2082 Female, age 91, right hemisphere 116.3
Hippocampus, CA2
nTPM: 185.6
1963 Male, age 80, left hemisphere 274.0
1892 Male, age 76, both hemispheres 267.3
2437 Female, age 94, left hemisphere 159.6
1940 Female, age 85, left hemisphere 151.7
2249 Male, age 74, both hemispheres 139.0
2113 Female, age 91, right hemisphere 122.0
Hippocampus, CA3
nTPM: 159.0
1867 Male, age 76, both hemispheres 188.8
1891 Female, age 85, both hemispheres 178.2
2137 Male, age 80, left hemisphere 175.4
2620 Female, age 94, left hemisphere 168.6
2861 Female, age 67, both hemispheres 125.7
2436 Male, age 74, both hemispheres 117.4
Parahippocampal cortex
nTPM: 161.0
1850 Male, age 80, both hemispheres 230.8
2532 Female, age 72, left hemisphere 189.3
1933 Female, age 85, both hemispheres 179.5
1990 Female, age 91, right hemisphere 178.6
2245 Female, age 91, both hemispheres 165.0
2693 Female, age 94, both hemispheres 152.5
2018 Male, age 76, both hemispheres 143.8
2692 Male, age 74, both hemispheres 140.6
2250 Female, age 67, right hemisphere 129.9
2622 Female, age 67, right hemisphere 100.1
Perirhinal gyrus
nTPM: 204.4
1847 Female, age 91, left hemisphere 235.9
1794 Male, age 80, right hemisphere 220.6
1841 Female, age 85, right hemisphere 197.3
2521 Female, age 94, right hemisphere 188.5
2848 Male, age 76, right hemisphere 179.8
Subiculum
nTPM: 164.7
1977 Female, age 85, both hemispheres 207.9
1901 Male, age 80, both hemispheres 193.6
2438 Female, age 94, left hemisphere 190.2
2042 Male, age 76, both hemispheres 149.9
2619 Male, age 74, both hemispheres 130.6
2729 Female, age 91, right hemisphere 116.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.7
Samples: 197

Max nTPM: 129.1
Min nTPM: 10.3
Std nTPM: 20.5
Median nTPM: 41.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 129.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 114.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 108.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 102.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 101.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 96.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 92.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 88.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 85.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 84.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 84.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 328.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 328.5
FF:10169-103B7 60 years, female 463.2
FF:10153-102I9 76 years, female 193.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 241.1
Pig sample Sample description nTPM
Subiculum
nTPM: 217.0
Samples: 4

Max nTPM: 290.8
Min nTPM: 178.7
Sample A Female 290.8
Sample B Female 198.2
Sample C Male 200.2
Sample D Male 178.7
Dorsal hippocampus
nTPM: 232.3
Samples: 4

Max nTPM: 303.4
Min nTPM: 165.9
Sample A Female 303.4
Sample B Female 243.6
Sample C Male 216.2
Sample D Male 165.9
Entorhinal cortex
nTPM: 241.1
Samples: 4

Max nTPM: 262.3
Min nTPM: 227.8
Sample A Female 262.3
Sample B Female 241.5
Sample C Male 232.8
Sample D Male 227.8
Ventral hippocampus
nTPM: 213.6
Samples: 4

Max nTPM: 240.8
Min nTPM: 149.4
Sample A Female 233.4
Sample B Female 149.4
Sample C Male 240.8
Sample D Male 230.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 202.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 202.6
Samples: 4

Max nTPM: 235.6
Min nTPM: 180.2
Sample A Male 180.2
Sample B Male 201.6
Sample C Female 192.8
Sample D Female 235.6
Hippocampal formation
nTPM: 181.6
Samples: 4

Max nTPM: 190.6
Min nTPM: 167.6
Sample A Male 190.6
Sample B Male 181.5
Sample C Female 186.8
Sample D Female 167.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.1
71358627 Antisense, RP_050725_03_F05, Mouse strain C57BL/6J (56 days, male) 18.9
68844642 Antisense, RP_050222_02_B03, Mouse strain C57BL/6J (56 days, male) 15.3

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