HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:36.1 nTPM
HPA Brain:35.7 nTPM
GTEx:36.1 nTPM
FANTOM5:76.2 Scaled Tags Per Million
Pig:40.7 nTPM
Mouse:61.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067881
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 35.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.9
1898 Male, age 80, left hemisphere 34.5
1855 Male, age 76, left hemisphere 27.2
2621 Female, age 67, right hemisphere 26.8
2529 Female, age 94, left hemisphere 26.4
1911 Female, age 85, right hemisphere 23.3
2148 Female, age 91, left hemisphere 23.0
Dentate gyrus
nTPM: 25.7
2010 Male, age 76, both hemispheres 34.6
1927 Female, age 91, both hemispheres 31.2
2528 Male, age 74, both hemispheres 25.3
2246 Female, age 85, both hemispheres 24.6
2531 Female, age 67, both hemispheres 20.6
2530 Female, age 94, left hemisphere 17.7
Entorhinal gyrus
nTPM: 25.1
1787 Male, age 76, left hemisphere 31.3
1938 Female, age 85, left hemisphere 30.2
2764 Male, age 80, right hemisphere 27.6
2117 Female, age 91, right hemisphere 21.7
2686 Male, age 75, right hemisphere 20.4
2613 Female, age 94, left hemisphere 19.3
Hippocampus, CA1
nTPM: 29.7
2749 Male, age 80, left hemisphere 38.4
2045 Male, age 76, both hemispheres 33.7
2527 Male, age 74, both hemispheres 28.2
1873 Female, age 85, both hemispheres 27.3
2082 Female, age 91, right hemisphere 21.0
Hippocampus, CA2
nTPM: 28.5
1892 Male, age 76, both hemispheres 43.5
2249 Male, age 74, both hemispheres 30.3
1940 Female, age 85, left hemisphere 25.5
1963 Male, age 80, left hemisphere 25.0
2113 Female, age 91, right hemisphere 24.5
2437 Female, age 94, left hemisphere 22.3
Hippocampus, CA3
nTPM: 28.2
1867 Male, age 76, both hemispheres 36.6
2137 Male, age 80, left hemisphere 33.6
2436 Male, age 74, both hemispheres 33.2
1891 Female, age 85, both hemispheres 27.5
2620 Female, age 94, left hemisphere 21.1
2861 Female, age 67, both hemispheres 17.3
Parahippocampal cortex
nTPM: 28.7
1850 Male, age 80, both hemispheres 39.4
2018 Male, age 76, both hemispheres 32.2
1933 Female, age 85, both hemispheres 31.1
1990 Female, age 91, right hemisphere 30.8
2250 Female, age 67, right hemisphere 28.7
2532 Female, age 72, left hemisphere 27.4
2245 Female, age 91, both hemispheres 26.5
2693 Female, age 94, both hemispheres 25.7
2692 Male, age 74, both hemispheres 24.4
2622 Female, age 67, right hemisphere 20.4
Perirhinal gyrus
nTPM: 35.7
1847 Female, age 91, left hemisphere 41.1
1794 Male, age 80, right hemisphere 38.3
1841 Female, age 85, right hemisphere 38.2
2848 Male, age 76, right hemisphere 32.9
2521 Female, age 94, right hemisphere 28.1
Subiculum
nTPM: 26.6
2042 Male, age 76, both hemispheres 30.4
1977 Female, age 85, both hemispheres 30.0
1901 Male, age 80, both hemispheres 27.2
2619 Male, age 74, both hemispheres 26.9
2438 Female, age 94, left hemisphere 22.7
2729 Female, age 91, right hemisphere 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.1
Samples: 197

Max nTPM: 102.1
Min nTPM: 16.8
Std nTPM: 12.2
Median nTPM: 34.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 102.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 81.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 67.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 64.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 61.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 60.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 58.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 58.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 54.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 76.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.2
FF:10169-103B7 60 years, female 78.9
FF:10153-102I9 76 years, female 73.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.7
Pig sample Sample description nTPM
Subiculum
nTPM: 39.7
Samples: 4

Max nTPM: 51.4
Min nTPM: 34.3
Sample A Female 51.4
Sample B Female 35.1
Sample C Male 34.3
Sample D Male 37.9
Dorsal hippocampus
nTPM: 40.7
Samples: 4

Max nTPM: 51.8
Min nTPM: 33.0
Sample A Female 51.8
Sample B Female 37.7
Sample C Male 40.3
Sample D Male 33.0
Entorhinal cortex
nTPM: 39.3
Samples: 4

Max nTPM: 46.3
Min nTPM: 32.6
Sample A Female 46.3
Sample B Female 42.6
Sample C Male 35.6
Sample D Male 32.6
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 42.4
Min nTPM: 26.9
Sample A Female 42.4
Sample B Female 26.9
Sample C Male 32.9
Sample D Male 40.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 61.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.5
Samples: 4

Max nTPM: 63.6
Min nTPM: 57.3
Sample A Male 57.3
Sample B Male 63.0
Sample C Female 63.6
Sample D Female 58.2
Hippocampal formation
nTPM: 61.5
Samples: 4

Max nTPM: 66.4
Min nTPM: 55.7
Sample A Male 66.4
Sample B Male 55.7
Sample C Female 64.4
Sample D Female 59.3

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