PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:413.6 nTPM
FANTOM5:510.6 Scaled Tags Per Million
Pig:409.2 nTPM
Mouse:27.7 nTPM
Allen mouse:1.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 413.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 304.7
2301 Female, age 85, both hemispheres 389.6
2090 Male, age 80, both hemispheres 324.3
2188 Female, age 91, both hemispheres 320.7
1984 Male, age 76, both hemispheres 184.2
Area postrema
nTPM: 331.9
2799 Male, age 61, both hemispheres 412.5
2306 Male, age 80, both hemispheres 362.1
2054 Male, age 76, both hemispheres 221.2
Dorsal cochlear nucleus
nTPM: 272.6
2370 Male, age 61, both hemispheres 337.3
2187 Female, age 91, both hemispheres 294.8
2802 Male, age 74, right hemisphere 261.7
2378 Male, age 80, both hemispheres 258.0
2058 Male, age 76, both hemispheres 210.9
Dorsal medullary reticular nucleus
nTPM: 267.5
2373 Male, age 61, both hemispheres 332.6
2088 Male, age 76, both hemispheres 239.1
2040 Female, age 85, both hemispheres 230.6
Dorsal motor vagal complex
nTPM: 226.0
2185 Male, age 76, both hemispheres 306.0
2807 Female, age 85, both hemispheres 285.4
2643 Male, age 74, both hemispheres 243.7
2797 Male, age 61, both hemispheres 228.0
2000 Male, age 74, unknown 191.0
2844 Male, age 55, unknown 188.9
2813 Female, age 72, unknown 185.7
2133 Female, age 91, both hemispheres 179.2
Dorsal tegmental nucleus
nTPM: 265.0
2358 Male, age 61, both hemispheres 293.0
2083 Male, age 80, both hemispheres 273.4
2326 Male, age 74, both hemispheres 270.3
1936 Male, age 76, left hemisphere 223.3
Dorsolateral tegmental area
nTPM: 276.9
2337 Male, age 61, both hemispheres 372.0
2751 Female, age 85, both hemispheres 331.2
2654 Male, age 80, both hemispheres 277.0
2360 Male, age 74, both hemispheres 216.1
2141 Male, age 76, both hemispheres 188.1
Gigantocellular reticular nuclei, medullary
nTPM: 278.4
2314 Male, age 61, both hemispheres 397.9
2462 Male, age 74, both hemispheres 291.9
2387 Female, age 91, both hemispheres 272.3
1876 Female, age 85, both hemispheres 263.6
2310 Male, age 80, both hemispheres 247.9
2022 Male, age 76, right hemisphere 196.6
Gigantocellular reticular nuclei, pars
nTPM: 248.2
2330 Male, age 80, both hemispheres 276.6
2706 Male, age 80, both hemispheres 274.8
2336 Male, age 61, both hemispheres 266.3
2084 Female, age 85, both hemispheres 240.0
2168 Male, age 76, both hemispheres 183.3
Inferior olive
nTPM: 374.0
2178 Male, age 61, both hemispheres 423.7
2379 Male, age 80, both hemispheres 400.2
2085 Female, age 85, both hemispheres 371.5
2563 Male, age 74, both hemispheres 368.5
2628 Female, age 91, both hemispheres 306.1
Kolliker-Fuse nucleus
nTPM: 300.8
2793 Female, age 91, left hemisphere 323.1
2315 Male, age 76, right hemisphere 316.6
2163 Male, age 80, both hemispheres 262.8
Lateral lemniscal nuclei
nTPM: 264.4
2746 Female, age 85, left hemisphere 316.4
2453 Male, age 74, right hemisphere 300.0
2320 Female, age 91, left hemisphere 275.5
2036 Male, age 80, both hemispheres 239.4
2169 Male, age 76, both hemispheres 190.9
Lateral medullary reticular nucleus
nTPM: 364.7
2305 Male, age 74, both hemispheres 476.9
2852 Male, age 80, both hemispheres 435.8
2374 Male, age 61, both hemispheres 385.1
2190 Female, age 85, both hemispheres 334.8
2804 Female, age 91, both hemispheres 307.1
2044 Male, age 76, both hemispheres 248.3
Lateral parabrachial nucleus
nTPM: 282.3
2792 Male, age 76, both hemispheres 372.3
2013 Male, age 80, both hemispheres 316.2
2139 Female, age 85, right hemisphere 298.9
2790 Male, age 61, both hemispheres 141.8
Lateral vestibular nucleus
nTPM: 278.8
2311 Male, age 80, both hemispheres 311.9
2184 Male, age 76, both hemispheres 245.6
Locus coeruleus
nTPM: 154.2
2317 Female, age 72, unknown 194.0
2162 Male, age 80, both hemispheres 171.6
2123 Female, age 91, both hemispheres 153.8
1980 Male, age 76, both hemispheres 150.9
2788 Male, age 74, unknown 147.7
2720 Male, age 74, both hemispheres 146.9
2014 Male, age 55, unknown 114.5
Medial olivary nucleus
nTPM: 412.5
1943 Male, age 61, both hemispheres 553.1
1962 Male, age 76, both hemispheres 398.7
2851 Male, age 80, both hemispheres 350.4
2138 Female, age 91, both hemispheres 347.7
Medial parabrachial nucleus
nTPM: 260.4
2170 Female, age 91, both hemispheres 346.4
2854 Male, age 80, both hemispheres 287.6
2463 Female, age 85, right hemisphere 282.1
2786 Male, age 76, both hemispheres 231.9
2156 Male, age 61, both hemispheres 154.0
Medial periolivary nuclei
nTPM: 282.3
2081 Male, age 80, both hemispheres 341.0
2791 Male, age 74, right hemisphere 338.4
2458 Female, age 91, both hemispheres 291.3
2171 Female, age 85, both hemispheres 229.5
2063 Male, age 76, both hemispheres 211.3
Medial vestibular nucleus
nTPM: 265.5
2624 Male, age 61, both hemispheres 367.8
2801 Male, age 74, both hemispheres 300.1
2093 Male, age 80, both hemispheres 279.5
2803 Female, age 91, both hemispheres 243.6
2743 Female, age 85, both hemispheres 203.9
2134 Male, age 76, both hemispheres 198.4
Motor facial nucleus
nTPM: 260.4
2365 Male, age 74, right hemisphere 344.3
2126 Male, age 61, both hemispheres 302.5
2795 Female, age 91, both hemispheres 270.6
2697 Female, age 85, both hemispheres 268.0
2062 Male, age 76, both hemispheres 201.4
2327 Male, age 80, both hemispheres 175.5
Motor hypoglossal nucleus
nTPM: 245.5
2182 Male, age 80, both hemispheres 307.5
2132 Female, age 85, both hemispheres 256.4
2125 Female, age 91, both hemispheres 247.2
2461 Male, age 61, both hemispheres 211.4
2277 Male, age 76, both hemispheres 204.8
Motor trigeminal nucleus
nTPM: 273.6
2335 Male, age 61, both hemispheres 331.1
2560 Male, age 74, both hemispheres 298.8
2321 Female, age 91, both hemispheres 272.5
2079 Male, age 80, both hemispheres 254.4
2309 Male, age 76, both hemispheres 211.0
Nuclei of the trapezoid body
nTPM: 226.0
2166 Male, age 80, both hemispheres 269.3
2368 Female, age 91, both hemispheres 251.3
1983 Male, age 76, both hemispheres 214.1
2735 Female, age 85, both hemispheres 206.9
2159 Male, age 61, both hemispheres 188.2
Nucleus ambiguus
nTPM: 346.0
2071 Male, age 76, both hemispheres 407.3
2096 Female, age 85, both hemispheres 284.8
Nucleus cuneatus
nTPM: 304.4
2808 Female, age 85, both hemispheres 391.4
2380 Male, age 80, both hemispheres 388.7
2564 Male, age 74, both hemispheres 364.8
2376 Male, age 61, both hemispheres 310.2
2381 Male, age 80, both hemispheres 303.7
2100 Male, age 76, both hemispheres 296.7
2805 Female, age 91, both hemispheres 260.0
2131 Male, age 76, both hemispheres 221.1
2562 Male, age 61, both hemispheres 202.6
Nucleus gracilis
nTPM: 348.4
2299 Female, age 85, both hemispheres 368.3
2627 Male, age 74, both hemispheres 346.4
2382 Male, age 80, both hemispheres 330.5
Nucleus raphe magnus
nTPM: 224.4
2455 Male, age 74, both hemispheres 258.3
2051 Male, age 76, both hemispheres 254.1
2459 Female, age 91, both hemispheres 245.1
2328 Male, age 80, both hemispheres 222.0
2160 Male, age 61, both hemispheres 198.8
2172 Female, age 85, both hemispheres 167.9
Nucleus raphe obscurus
nTPM: 394.2
2142 Male, age 76, midline 445.8
2845 Female, age 85, midline 403.3
2800 Male, age 61, midline 333.4
Nucleus raphe pallidus
nTPM: 413.6
1924 Male, age 61, midline 566.3
2145 Male, age 76, midline 406.9
2183 Male, age 80, midline 267.5
Nucleus tractus solitarii
nTPM: 173.7
2191 Female, age 85, both hemispheres 205.2
2656 Male, age 76, both hemispheres 183.9
2307 Male, age 80, both hemispheres 168.7
2144 Female, age 91, right hemisphere 137.0
Paramedian reticular nucleus
nTPM: 251.4
2313 Male, age 61, both hemispheres 272.9
2057 Male, age 80, both hemispheres 250.2
2052 Male, age 76, both hemispheres 244.6
2050 Female, age 85, both hemispheres 237.8
Parvicellular reticular nuclei
nTPM: 292.2
2558 Male, age 74, both hemispheres 301.2
2119 Male, age 80, both hemispheres 299.8
2095 Male, age 76, both hemispheres 275.5
Parvicellular reticular nuclei, medullary
nTPM: 207.4
2091 Female, age 85, both hemispheres 230.7
2189 Female, age 91, both hemispheres 202.8
2181 Male, age 80, left hemisphere 188.8
Pedunculopontine tegmental nucleus
nTPM: 224.7
2338 Male, age 61, both hemispheres 283.3
2334 Male, age 80, both hemispheres 212.8
1921 Female, age 85, both hemispheres 177.9
Peritrigeminal nucleus
nTPM: 341.8
2067 Female, age 85, both hemispheres 368.6
2179 Male, age 61, both hemispheres 328.6
2136 Male, age 76, both hemispheres 328.3
Pontine nuclei
nTPM: 270.4
2115 Male, age 80, left hemisphere 342.5
2319 Female, age 91, both hemispheres 331.0
2109 Female, age 72, unknown 310.3
2454 Male, age 74, left hemisphere 268.3
1863 Male, age 55, unknown 257.3
2787 Female, age 85, both hemispheres 232.8
2727 Male, age 61, right hemisphere 212.0
1968 Male, age 76, left hemisphere 208.9
Pontine raphe nucleus
nTPM: 202.7
2122 Female, age 85, midline 204.5
2853 Male, age 76, midline 201.0
Posteroventral cochlear nucleus
nTPM: 318.2
2371 Male, age 61, both hemispheres 392.6
2341 Male, age 80, both hemispheres 383.8
2135 Female, age 91, both hemispheres 381.6
2070 Male, age 76, both hemispheres 232.7
2752 Female, age 85, both hemispheres 200.2
Prepositus hypoglossal nucleus
nTPM: 256.7
2855 Female, age 85, right hemisphere 283.8
2086 Male, age 80, both hemispheres 229.7
Principal sensory trigeminal nucleus
nTPM: 236.1
2367 Female, age 91, left hemisphere 315.7
2324 Male, age 76, both hemispheres 245.4
2008 Male, age 80, left hemisphere 209.1
2158 Male, age 61, both hemispheres 174.0
Reticular pontine nucleus, caudal
nTPM: 263.8
2559 Male, age 74, both hemispheres 302.1
2457 Female, age 91, both hemispheres 283.4
2092 Male, age 76, both hemispheres 255.8
2332 Male, age 80, right hemisphere 213.9
Reticular pontine nucleus, oral
nTPM: 268.2
2361 Male, age 74, both hemispheres 304.7
1939 Male, age 80, both hemispheres 291.7
2366 Female, age 91, both hemispheres 255.3
2167 Male, age 76, both hemispheres 245.2
2012 Female, age 85, both hemispheres 243.9
Reticulotegmental nucleus
nTPM: 267.5
2452 Male, age 74, both hemispheres 304.5
2333 Male, age 80, both hemispheres 293.5
2322 Female, age 91, both hemispheres 282.9
2325 Male, age 76, both hemispheres 189.3
Spinal trigeminal nucleus, caudal
nTPM: 265.6
2312 Male, age 61, both hemispheres 301.9
2308 Male, age 80, both hemispheres 298.1
2642 Male, age 74, both hemispheres 269.0
2447 Male, age 76, both hemispheres 240.9
2390 Female, age 91, both hemispheres 218.2
Spinal trigeminal nucleus, interpolar
nTPM: 248.4
2625 Male, age 61, both hemispheres 336.3
2033 Male, age 80, both hemispheres 239.1
2386 Female, age 85, both hemispheres 233.3
2066 Male, age 76, right hemisphere 222.6
2389 Female, age 91, both hemispheres 210.8
Spinal trigeminal nucleus, oral
nTPM: 217.2
2164 Male, age 80, both hemispheres 269.5
2737 Female, age 85, both hemispheres 191.3
1978 Male, age 76, both hemispheres 190.8
Spinal vestibular nucleus
nTPM: 270.5
2796 Male, age 61, both hemispheres 432.6
2384 Male, age 74, both hemispheres 265.2
2806 Female, age 85, both hemispheres 255.8
2748 Male, age 76, both hemispheres 239.7
2780 Male, age 80, both hemispheres 223.2
2186 Female, age 91, both hemispheres 206.4
Subcoeruleus area
nTPM: 249.9
2369 Female, age 85, left hemisphere 369.7
2451 Male, age 74, both hemispheres 270.0
1958 Male, age 80, both hemispheres 233.6
2089 Male, age 76, left hemisphere 223.9
2323 Female, age 91, left hemisphere 152.1
Superior olive
nTPM: 265.5
2364 Male, age 74, right hemisphere 335.4
2561 Female, age 91, both hemispheres 275.0
2329 Male, age 80, right hemisphere 254.7
2020 Male, age 76, both hemispheres 252.5
1875 Female, age 85, both hemispheres 210.1
Superior vestibular nucleus
nTPM: 242.8
2061 Male, age 76, both hemispheres 258.9
2015 Male, age 80, both hemispheres 258.0
2383 Male, age 74, both hemispheres 211.6
Ventral medullary reticular nucleus
nTPM: 283.9
2372 Male, age 61, both hemispheres 334.2
2060 Male, age 76, both hemispheres 233.5
Ventral periolivary nuclei
nTPM: 250.2
2023 Male, age 76, both hemispheres 274.0
2794 Female, age 91, left hemisphere 250.3
2165 Male, age 80, both hemispheres 243.3
2130 Female, age 85, both hemispheres 233.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 317.6
2118 Male, age 80, both hemispheres 363.6
2180 Male, age 61, both hemispheres 340.1
2302 Female, age 91, both hemispheres 314.8
1986 Male, age 76, both hemispheres 298.6
2741 Female, age 85, both hemispheres 271.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 278.9
2456 Female, age 91, both hemispheres 301.3
2840 Female, age 85, both hemispheres 294.6
2449 Male, age 74, both hemispheres 289.9
2161 Male, age 80, both hemispheres 280.5
2359 Male, age 61, both hemispheres 274.9
1959 Male, age 76, both hemispheres 232.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 510.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 356.7
FF:10182-103D2 60 years, female 436.0
FF:10165-103B3 76 years, female 277.3
Medulla oblongata
Scaled Tags Per Million: 431.9
FF:10038-101F2 18-64 years, mixed 729.9
FF:10155-103A2 76 years, female 302.3
FF:10174-103C3 60 years, female 263.6
Pons
Scaled Tags Per Million: 510.6
FF:10033-101E6 18-54 years, mixed 510.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 409.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 409.2
Samples: 4

Max nTPM: 488.0
Min nTPM: 291.3
Sample A Female 416.4
Sample B Female 291.3
Sample C Male 441.0
Sample D Male 488.0
Pons
nTPM: 249.4
Samples: 4

Max nTPM: 317.1
Min nTPM: 184.2
Sample A Female 249.8
Sample B Female 184.2
Sample C Male 246.4
Sample D Male 317.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 27.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 27.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 24.2
Sample A Male 27.5
Sample B Male 24.2
Sample C Female 26.7
Sample D Female 32.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.9
69013438 Antisense, RP_050309_02_D07, Mouse strain C57BL/6J (56 days, male) 1.9
Pons
Expression energy: 1.9
69013438 Antisense, RP_050309_02_D07, Mouse strain C57BL/6J (56 days, male) 1.9

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