PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:545.9 nTPM
FANTOM5:336.4 Scaled Tags Per Million
Pig:824.4 nTPM
Mouse:995.3 nTPM
Allen mouse:6.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 545.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 479.2
2188 Female, age 91, both hemispheres 634.8
2301 Female, age 85, both hemispheres 599.9
2090 Male, age 80, both hemispheres 443.7
1984 Male, age 76, both hemispheres 238.5
Area postrema
nTPM: 257.7
2306 Male, age 80, both hemispheres 333.7
2054 Male, age 76, both hemispheres 284.1
2799 Male, age 61, both hemispheres 155.3
Dorsal cochlear nucleus
nTPM: 339.9
2187 Female, age 91, both hemispheres 567.4
2802 Male, age 74, right hemisphere 346.0
2378 Male, age 80, both hemispheres 296.2
2058 Male, age 76, both hemispheres 267.1
2370 Male, age 61, both hemispheres 222.5
Dorsal medullary reticular nucleus
nTPM: 323.5
2040 Female, age 85, both hemispheres 408.5
2373 Male, age 61, both hemispheres 281.7
2088 Male, age 76, both hemispheres 280.3
Dorsal motor vagal complex
nTPM: 280.0
2844 Male, age 55, unknown 358.8
2133 Female, age 91, both hemispheres 340.5
2813 Female, age 72, unknown 316.2
2000 Male, age 74, unknown 311.7
2185 Male, age 76, both hemispheres 287.8
2807 Female, age 85, both hemispheres 269.9
2643 Male, age 74, both hemispheres 206.1
2797 Male, age 61, both hemispheres 148.8
Dorsal tegmental nucleus
nTPM: 337.0
2326 Male, age 74, both hemispheres 423.6
2083 Male, age 80, both hemispheres 390.8
1936 Male, age 76, left hemisphere 293.5
2358 Male, age 61, both hemispheres 239.9
Dorsolateral tegmental area
nTPM: 349.2
2751 Female, age 85, both hemispheres 509.3
2654 Male, age 80, both hemispheres 356.1
2337 Male, age 61, both hemispheres 305.6
2141 Male, age 76, both hemispheres 289.3
2360 Male, age 74, both hemispheres 285.6
Gigantocellular reticular nuclei, medullary
nTPM: 393.9
2387 Female, age 91, both hemispheres 525.5
2314 Male, age 61, both hemispheres 511.7
1876 Female, age 85, both hemispheres 440.4
2310 Male, age 80, both hemispheres 332.8
2462 Male, age 74, both hemispheres 301.5
2022 Male, age 76, right hemisphere 251.6
Gigantocellular reticular nuclei, pars
nTPM: 349.9
2336 Male, age 61, both hemispheres 381.0
2084 Female, age 85, both hemispheres 345.5
2330 Male, age 80, both hemispheres 345.0
2706 Male, age 80, both hemispheres 343.6
2168 Male, age 76, both hemispheres 334.6
Inferior olive
nTPM: 498.6
2563 Male, age 74, both hemispheres 629.6
2628 Female, age 91, both hemispheres 518.4
2178 Male, age 61, both hemispheres 479.3
2085 Female, age 85, both hemispheres 474.2
2379 Male, age 80, both hemispheres 391.8
Kolliker-Fuse nucleus
nTPM: 410.4
2793 Female, age 91, left hemisphere 668.9
2163 Male, age 80, both hemispheres 288.1
2315 Male, age 76, right hemisphere 274.3
Lateral lemniscal nuclei
nTPM: 416.2
2320 Female, age 91, left hemisphere 517.6
2746 Female, age 85, left hemisphere 423.9
2453 Male, age 74, right hemisphere 414.8
2036 Male, age 80, both hemispheres 362.8
2169 Male, age 76, both hemispheres 362.0
Lateral medullary reticular nucleus
nTPM: 526.0
2305 Male, age 74, both hemispheres 903.4
2374 Male, age 61, both hemispheres 496.6
2804 Female, age 91, both hemispheres 494.5
2852 Male, age 80, both hemispheres 462.2
2190 Female, age 85, both hemispheres 440.4
2044 Male, age 76, both hemispheres 358.9
Lateral parabrachial nucleus
nTPM: 364.2
2792 Male, age 76, both hemispheres 549.9
2013 Male, age 80, both hemispheres 348.5
2139 Female, age 85, right hemisphere 321.7
2790 Male, age 61, both hemispheres 236.7
Lateral vestibular nucleus
nTPM: 317.6
2311 Male, age 80, both hemispheres 366.3
2184 Male, age 76, both hemispheres 269.0
Locus coeruleus
nTPM: 380.7
2014 Male, age 55, unknown 485.6
2720 Male, age 74, both hemispheres 440.0
2788 Male, age 74, unknown 399.2
2123 Female, age 91, both hemispheres 388.8
2162 Male, age 80, both hemispheres 347.2
1980 Male, age 76, both hemispheres 326.2
2317 Female, age 72, unknown 277.9
Medial olivary nucleus
nTPM: 521.0
1962 Male, age 76, both hemispheres 597.1
2138 Female, age 91, both hemispheres 551.6
1943 Male, age 61, both hemispheres 526.5
2851 Male, age 80, both hemispheres 408.6
Medial parabrachial nucleus
nTPM: 412.9
2170 Female, age 91, both hemispheres 632.0
2854 Male, age 80, both hemispheres 471.6
2463 Female, age 85, right hemisphere 396.2
2786 Male, age 76, both hemispheres 341.6
2156 Male, age 61, both hemispheres 223.3
Medial periolivary nuclei
nTPM: 432.4
2791 Male, age 74, right hemisphere 612.6
2458 Female, age 91, both hemispheres 472.7
2081 Male, age 80, both hemispheres 407.7
2063 Male, age 76, both hemispheres 360.6
2171 Female, age 85, both hemispheres 308.4
Medial vestibular nucleus
nTPM: 411.4
2801 Male, age 74, both hemispheres 726.1
2803 Female, age 91, both hemispheres 480.8
2624 Male, age 61, both hemispheres 356.7
2093 Male, age 80, both hemispheres 337.8
2743 Female, age 85, both hemispheres 326.2
2134 Male, age 76, both hemispheres 241.0
Motor facial nucleus
nTPM: 417.3
2365 Male, age 74, right hemisphere 607.1
2697 Female, age 85, both hemispheres 473.2
2126 Male, age 61, both hemispheres 435.7
2062 Male, age 76, both hemispheres 336.9
2327 Male, age 80, both hemispheres 329.8
2795 Female, age 91, both hemispheres 321.1
Motor hypoglossal nucleus
nTPM: 388.7
2125 Female, age 91, both hemispheres 503.2
2182 Male, age 80, both hemispheres 450.7
2132 Female, age 85, both hemispheres 430.1
2461 Male, age 61, both hemispheres 323.1
2277 Male, age 76, both hemispheres 236.4
Motor trigeminal nucleus
nTPM: 386.7
2560 Male, age 74, both hemispheres 528.8
2321 Female, age 91, both hemispheres 482.0
2079 Male, age 80, both hemispheres 330.8
2309 Male, age 76, both hemispheres 312.9
2335 Male, age 61, both hemispheres 279.1
Nuclei of the trapezoid body
nTPM: 381.6
2159 Male, age 61, both hemispheres 440.8
2166 Male, age 80, both hemispheres 405.7
2368 Female, age 91, both hemispheres 397.6
1983 Male, age 76, both hemispheres 368.2
2735 Female, age 85, both hemispheres 295.9
Nucleus ambiguus
nTPM: 379.5
2071 Male, age 76, both hemispheres 504.3
2096 Female, age 85, both hemispheres 254.8
Nucleus cuneatus
nTPM: 342.9
2808 Female, age 85, both hemispheres 470.9
2380 Male, age 80, both hemispheres 440.0
2381 Male, age 80, both hemispheres 415.1
2564 Male, age 74, both hemispheres 412.3
2376 Male, age 61, both hemispheres 308.1
2100 Male, age 76, both hemispheres 303.7
2131 Male, age 76, both hemispheres 259.1
2805 Female, age 91, both hemispheres 252.1
2562 Male, age 61, both hemispheres 224.6
Nucleus gracilis
nTPM: 427.7
2627 Male, age 74, both hemispheres 556.2
2382 Male, age 80, both hemispheres 457.2
2299 Female, age 85, both hemispheres 269.8
Nucleus raphe magnus
nTPM: 382.8
2455 Male, age 74, both hemispheres 450.7
2459 Female, age 91, both hemispheres 433.4
2051 Male, age 76, both hemispheres 405.3
2328 Male, age 80, both hemispheres 363.3
2160 Male, age 61, both hemispheres 354.5
2172 Female, age 85, both hemispheres 289.4
Nucleus raphe obscurus
nTPM: 545.9
2845 Female, age 85, midline 717.0
2142 Male, age 76, midline 465.5
2800 Male, age 61, midline 455.4
Nucleus raphe pallidus
nTPM: 507.0
2145 Male, age 76, midline 616.2
1924 Male, age 61, midline 460.8
2183 Male, age 80, midline 444.0
Nucleus tractus solitarii
nTPM: 253.2
2656 Male, age 76, both hemispheres 294.1
2144 Female, age 91, right hemisphere 288.3
2191 Female, age 85, both hemispheres 215.3
2307 Male, age 80, both hemispheres 215.0
Paramedian reticular nucleus
nTPM: 395.8
2050 Female, age 85, both hemispheres 461.2
2052 Male, age 76, both hemispheres 425.7
2313 Male, age 61, both hemispheres 349.4
2057 Male, age 80, both hemispheres 346.8
Parvicellular reticular nuclei
nTPM: 381.3
2095 Male, age 76, both hemispheres 396.5
2119 Male, age 80, both hemispheres 390.6
2558 Male, age 74, both hemispheres 356.7
Parvicellular reticular nuclei, medullary
nTPM: 339.9
2189 Female, age 91, both hemispheres 418.5
2181 Male, age 80, left hemisphere 309.6
2091 Female, age 85, both hemispheres 291.5
Pedunculopontine tegmental nucleus
nTPM: 355.3
2334 Male, age 80, both hemispheres 380.3
2338 Male, age 61, both hemispheres 356.9
1921 Female, age 85, both hemispheres 328.8
Peritrigeminal nucleus
nTPM: 366.7
2136 Male, age 76, both hemispheres 384.9
2179 Male, age 61, both hemispheres 365.9
2067 Female, age 85, both hemispheres 349.3
Pontine nuclei
nTPM: 466.7
2454 Male, age 74, left hemisphere 884.9
2319 Female, age 91, both hemispheres 596.2
2109 Female, age 72, unknown 449.0
1863 Male, age 55, unknown 428.4
1968 Male, age 76, left hemisphere 377.1
2727 Male, age 61, right hemisphere 362.3
2115 Male, age 80, left hemisphere 347.8
2787 Female, age 85, both hemispheres 287.6
Pontine raphe nucleus
nTPM: 361.0
2853 Male, age 76, midline 382.3
2122 Female, age 85, midline 339.6
Posteroventral cochlear nucleus
nTPM: 412.2
2135 Female, age 91, both hemispheres 676.3
2341 Male, age 80, both hemispheres 469.3
2070 Male, age 76, both hemispheres 355.8
2752 Female, age 85, both hemispheres 315.0
2371 Male, age 61, both hemispheres 244.6
Prepositus hypoglossal nucleus
nTPM: 372.1
2855 Female, age 85, right hemisphere 518.6
2086 Male, age 80, both hemispheres 225.6
Principal sensory trigeminal nucleus
nTPM: 390.5
2367 Female, age 91, left hemisphere 607.9
2158 Male, age 61, both hemispheres 348.0
2008 Male, age 80, left hemisphere 340.2
2324 Male, age 76, both hemispheres 265.9
Reticular pontine nucleus, caudal
nTPM: 473.7
2559 Male, age 74, both hemispheres 650.9
2457 Female, age 91, both hemispheres 533.6
2092 Male, age 76, both hemispheres 393.7
2332 Male, age 80, right hemisphere 316.5
Reticular pontine nucleus, oral
nTPM: 529.8
2361 Male, age 74, both hemispheres 835.1
2366 Female, age 91, both hemispheres 598.5
2012 Female, age 85, both hemispheres 414.9
1939 Male, age 80, both hemispheres 408.2
2167 Male, age 76, both hemispheres 392.2
Reticulotegmental nucleus
nTPM: 352.2
2322 Female, age 91, both hemispheres 428.5
2452 Male, age 74, both hemispheres 373.0
2333 Male, age 80, both hemispheres 314.3
2325 Male, age 76, both hemispheres 293.1
Spinal trigeminal nucleus, caudal
nTPM: 373.9
2312 Male, age 61, both hemispheres 471.0
2390 Female, age 91, both hemispheres 413.1
2642 Male, age 74, both hemispheres 347.1
2308 Male, age 80, both hemispheres 341.2
2447 Male, age 76, both hemispheres 297.2
Spinal trigeminal nucleus, interpolar
nTPM: 333.9
2389 Female, age 91, both hemispheres 417.6
2386 Female, age 85, both hemispheres 349.0
2033 Male, age 80, both hemispheres 344.7
2066 Male, age 76, right hemisphere 288.7
2625 Male, age 61, both hemispheres 269.7
Spinal trigeminal nucleus, oral
nTPM: 294.5
1978 Male, age 76, both hemispheres 321.2
2164 Male, age 80, both hemispheres 303.1
2737 Female, age 85, both hemispheres 259.1
Spinal vestibular nucleus
nTPM: 362.1
2806 Female, age 85, both hemispheres 455.0
2186 Female, age 91, both hemispheres 388.9
2384 Male, age 74, both hemispheres 383.7
2748 Male, age 76, both hemispheres 375.5
2780 Male, age 80, both hemispheres 300.1
2796 Male, age 61, both hemispheres 269.2
Subcoeruleus area
nTPM: 371.8
2369 Female, age 85, left hemisphere 550.2
1958 Male, age 80, both hemispheres 384.3
2089 Male, age 76, left hemisphere 338.8
2323 Female, age 91, left hemisphere 326.8
2451 Male, age 74, both hemispheres 258.6
Superior olive
nTPM: 465.2
2364 Male, age 74, right hemisphere 638.7
2020 Male, age 76, both hemispheres 457.7
2561 Female, age 91, both hemispheres 424.3
2329 Male, age 80, right hemisphere 411.2
1875 Female, age 85, both hemispheres 394.3
Superior vestibular nucleus
nTPM: 360.5
2383 Male, age 74, both hemispheres 442.4
2015 Male, age 80, both hemispheres 336.8
2061 Male, age 76, both hemispheres 302.5
Ventral medullary reticular nucleus
nTPM: 361.1
2372 Male, age 61, both hemispheres 381.9
2060 Male, age 76, both hemispheres 340.3
Ventral periolivary nuclei
nTPM: 385.4
2023 Male, age 76, both hemispheres 474.7
2165 Male, age 80, both hemispheres 372.6
2130 Female, age 85, both hemispheres 348.4
2794 Female, age 91, left hemisphere 345.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 398.1
2180 Male, age 61, both hemispheres 485.3
2302 Female, age 91, both hemispheres 434.1
2118 Male, age 80, both hemispheres 394.0
2741 Female, age 85, both hemispheres 339.9
1986 Male, age 76, both hemispheres 337.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 415.1
2449 Male, age 74, both hemispheres 511.2
2840 Female, age 85, both hemispheres 477.9
2456 Female, age 91, both hemispheres 404.9
1959 Male, age 76, both hemispheres 391.4
2161 Male, age 80, both hemispheres 360.2
2359 Male, age 61, both hemispheres 345.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 336.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 244.3
FF:10182-103D2 60 years, female 254.9
FF:10165-103B3 76 years, female 233.7
Medulla oblongata
Scaled Tags Per Million: 269.1
FF:10174-103C3 60 years, female 352.7
FF:10038-101F2 18-64 years, mixed 272.3
FF:10155-103A2 76 years, female 182.4
Pons
Scaled Tags Per Million: 336.4
FF:10033-101E6 18-54 years, mixed 336.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 824.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 824.4
Samples: 4

Max nTPM: 1031.1
Min nTPM: 595.3
Sample A Female 813.9
Sample B Female 595.3
Sample C Male 857.1
Sample D Male 1031.1
Pons
nTPM: 798.0
Samples: 4

Max nTPM: 901.0
Min nTPM: 633.2
Sample A Female 901.0
Sample B Female 633.2
Sample C Male 856.8
Sample D Male 801.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 995.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 995.3
Samples: 4

Max nTPM: 1055.4
Min nTPM: 920.1
Sample A Male 970.0
Sample B Male 920.1
Sample C Female 1035.5
Sample D Female 1055.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.3
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 4.7
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 3.8
Pons
Expression energy: 6.1
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 6.6
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 5.7

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