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  • STMN1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:236.9 nTPM
HPA Brain:543.1 nTPM
GTEx:236.9 nTPM
FANTOM5:356.8 Scaled Tags Per Million
Pig:498.6 nTPM
Mouse:975.4 nTPM
Allen mouse:6.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068438Antibody CAB010107
Glial cells LowHigh
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

543.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 168.7
2288 Male, age 75, left hemisphere 324.1
1781 Male, age 74, unknown 292.3
2481 Female, age 94, left hemisphere 176.9
2846 Female, age 79, unknown 158.7
2290 Female, age 72, unknown 108.0
1857 Female, age 85, left hemisphere 97.8
1854 Male, age 80, left hemisphere 96.1
2289 Male, age 61, right hemisphere 95.4
Globus pallidus, externus
nTPM: 318.5
2395 Male, age 75, both hemispheres 466.4
2772 Female, age 79, unknown 401.8
1996 Male, age 80, right hemisphere 337.3
2646 Male, age 61, right hemisphere 203.8
2567 Female, age 72, unknown 182.9
Globus pallidus, internus
nTPM: 442.6
2287 Male, age 75, right hemisphere 757.3
2778 Female, age 91, both hemispheres 601.3
2111 Female, age 85, right hemisphere 507.4
1818 Male, age 74, unknown 343.7
2037 Male, age 80, right hemisphere 335.4
2566 Female, age 72, unknown 322.6
2483 Female, age 94, right hemisphere 230.6
Nucleus accumbens
nTPM: 222.4
2391 Female, age 94, left hemisphere 477.7
2286 Male, age 75, left hemisphere 283.4
2698 Female, age 72, unknown 247.8
2732 Male, age 80, right hemisphere 212.2
1783 Male, age 74, unknown 154.3
1856 Female, age 91, right hemisphere 142.2
1806 Female, age 85, left hemisphere 132.6
2824 Male, age 61, right hemisphere 129.5
Nucleus basalis of Meynert
nTPM: 213.0
2821 Male, age 75, both hemispheres 423.2
2484 Female, age 94, left hemisphere 155.8
2569 Male, age 61, both hemispheres 147.8
2393 Male, age 80, right hemisphere 125.1
Nucleus of the diagonal band
nTPM: 543.1
2029 Male, age 61, right hemisphere 766.0
2775 Male, age 80, right hemisphere 603.7
1812 Female, age 91, both hemispheres 555.0
2195 Female, age 85, both hemispheres 519.3
1979 Male, age 74, unknown 271.4
Putamen
nTPM: 151.8
2482 Female, age 94, left hemisphere 211.8
1937 Female, age 91, right hemisphere 188.8
2647 Male, age 75, left hemisphere 178.9
1829 Male, age 74, unknown 166.9
2466 Female, age 79, unknown 131.4
2489 Female, age 72, unknown 105.2
1838 Male, age 80, right hemisphere 79.5
Septal nuclei
nTPM: 433.8
2031 Female, age 72, unknown 686.9
2629 Female, age 94, right hemisphere 651.2
1960 Male, age 74, unknown 495.4
2009 Female, age 91, both hemispheres 420.4
2059 Female, age 85, both hemispheres 309.9
2394 Male, age 61, left hemisphere 259.5
2199 Male, age 80, right hemisphere 213.4
Stria terminalis, bed nucleus
nTPM: 467.4
1974 Female, age 91, both hemispheres 551.3
2486 Female, age 94, both hemispheres 535.2
2201 Male, age 74, unknown 315.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 207.4
Samples: 246

Max nTPM: 909.0
Min nTPM: 79.7
Std nTPM: 95.7
Median nTPM: 184.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 909.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 860.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 688.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 544.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 454.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 435.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 428.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 403.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 389.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 385.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 384.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 380.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 373.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 372.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 336.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 333.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 322.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 312.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 302.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 301.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 301.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 299.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 295.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 295.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 290.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 283.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 281.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 279.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 279.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 277.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 269.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 266.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 264.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 262.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 261.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 261.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 260.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 259.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 259.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 259.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 259.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 257.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 245.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 244.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 242.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 242.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 242.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 241.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 241.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 240.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 240.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 237.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 235.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 234.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 233.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 231.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 231.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 231.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 230.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 229.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 225.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 224.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 223.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 223.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 223.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 223.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 222.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 222.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 221.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 220.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 218.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 217.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 217.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 215.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 214.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 214.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 213.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 213.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 209.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 208.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 207.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 206.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 206.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 206.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 205.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 205.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 205.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 205.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 205.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 205.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 204.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 202.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 202.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 202.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 202.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 202.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 201.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 201.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 201.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 201.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 200.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 198.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 196.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 194.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 194.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 194.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 194.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 194.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 194.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 194.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 193.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 191.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 190.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 190.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 188.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 187.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 186.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 186.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 185.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 185.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 185.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 184.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 184.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 184.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 183.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 183.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 182.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 182.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 182.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 181.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 181.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 181.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 180.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 180.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 180.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 180.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 179.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 179.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 179.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 179.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 179.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 179.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 178.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 177.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 177.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 176.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 174.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 174.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 174.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 174.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 173.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 173.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 173.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 172.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 172.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 172.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 171.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 171.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 169.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 169.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 169.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 169.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 168.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 168.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 165.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 164.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 164.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 164.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 162.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 161.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 161.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 161.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 161.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 160.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 160.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 160.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 159.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 158.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 158.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 157.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 156.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 154.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 154.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 154.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 153.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 153.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 153.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 152.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 152.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 151.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 151.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 150.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 150.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 150.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 149.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 148.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 148.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 146.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 146.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 144.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 144.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 143.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 143.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 141.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 141.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 141.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 140.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 140.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 139.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 139.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 138.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 138.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 138.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 137.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 136.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 136.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 135.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 133.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 133.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 133.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 132.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 131.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 131.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 130.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 130.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 129.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 128.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 128.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 123.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 123.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 122.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 118.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 117.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 117.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 117.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 113.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 109.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 107.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 101.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 79.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 236.9
Samples: 246

Max nTPM: 1195.9
Min nTPM: 96.0
Std nTPM: 139.7
Median nTPM: 195.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1195.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 814.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 809.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 782.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 711.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 622.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 596.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 582.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 566.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 565.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 548.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 541.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 534.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 524.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 524.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 522.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 511.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 493.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 484.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 463.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 434.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 432.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 425.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 421.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 416.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 391.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 387.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 385.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 383.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 381.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 378.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 370.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 355.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 338.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 332.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 331.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 326.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 312.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 309.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 302.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 301.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 299.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 296.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 294.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 291.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 288.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 278.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 275.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 270.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 263.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 257.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 256.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 249.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 248.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 247.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 246.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 246.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 246.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 245.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 244.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 244.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 243.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 242.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 241.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 241.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 240.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 240.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 238.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 238.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 237.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 236.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 236.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 234.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 233.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 233.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 233.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 232.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 231.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 230.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 230.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 229.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 229.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 228.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 227.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 226.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 225.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 225.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 222.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 221.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 221.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 220.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 218.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 216.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 215.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 215.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 214.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 213.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 213.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 213.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 211.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 211.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 210.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 209.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 209.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 209.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 208.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 208.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 207.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 206.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 206.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 206.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 205.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 203.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 202.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 202.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 201.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 200.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 198.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 197.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 197.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 197.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 196.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 196.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 195.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 194.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 194.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 192.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 191.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 187.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 186.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 185.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 185.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 185.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 184.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 184.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 183.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 183.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 183.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 182.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 182.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 181.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 181.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 180.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 180.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 180.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 178.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 177.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 176.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 176.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 175.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 175.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 175.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 175.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 175.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 175.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 174.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 174.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 174.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 173.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 173.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 173.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 172.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 172.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 172.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 170.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 169.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 168.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 167.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 167.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 167.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 166.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 166.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 166.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 166.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 165.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 165.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 165.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 164.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 164.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 163.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 163.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 163.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 162.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 161.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 161.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 161.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 161.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 160.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 160.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 160.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 159.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 158.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 157.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 155.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 155.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 155.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 153.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 150.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 149.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 149.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 149.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 149.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 148.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 148.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 147.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 147.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 143.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 143.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 143.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 142.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 142.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 142.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 141.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 141.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 140.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 140.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 140.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 140.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 139.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 138.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 138.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 136.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 136.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 133.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 133.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 132.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 132.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 131.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 129.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 128.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 126.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 124.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 123.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 121.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 121.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 119.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 118.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 116.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 115.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 114.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 111.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 110.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 109.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 106.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 102.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 96.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 236.3
Samples: 205

Max nTPM: 1191.4
Min nTPM: 94.9
Std nTPM: 111.4
Median nTPM: 214.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1191.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 819.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 771.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 585.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 542.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 435.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 423.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 394.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 391.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 381.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 373.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 367.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 348.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 346.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 342.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 341.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 339.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 332.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 330.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 327.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 325.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 323.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 314.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 313.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 309.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 306.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 305.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 299.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 298.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 296.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 295.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 295.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 293.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 289.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 288.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 283.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 279.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 278.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 277.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 274.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 269.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 269.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 269.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 268.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 266.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 266.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 264.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 261.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 259.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 258.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 258.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 257.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 257.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 256.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 253.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 252.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 251.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 251.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 250.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 250.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 249.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 247.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 245.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 244.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 243.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 243.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 241.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 241.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 240.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 240.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 238.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 237.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 236.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 236.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 234.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 234.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 232.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 231.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 231.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 230.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 229.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 229.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 229.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 228.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 227.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 227.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 224.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 222.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 222.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 222.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 222.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 221.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 221.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 221.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 221.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 220.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 220.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 219.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 218.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 218.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 217.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 215.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 214.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 214.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 213.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 212.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 211.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 211.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 210.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 210.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 210.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 209.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 207.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 206.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 205.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 205.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 205.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 204.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 203.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 202.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 202.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 201.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 201.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 201.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 201.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 201.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 201.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 200.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 199.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 199.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 198.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 197.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 196.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 196.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 196.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 194.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 192.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 192.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 191.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 191.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 190.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 188.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 187.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 187.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 187.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 187.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 186.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 186.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 186.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 185.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 184.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 184.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 184.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 183.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 182.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 180.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 179.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 178.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 178.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 178.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 178.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 177.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 176.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 174.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 173.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 172.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 172.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 169.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 166.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 165.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 164.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 164.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 163.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 163.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 163.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 162.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 161.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 160.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 157.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 157.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 157.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 156.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 156.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 155.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 154.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 153.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 150.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 147.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 146.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 144.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 144.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 143.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 141.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 139.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 138.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 138.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 136.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 136.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 128.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 127.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 125.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 124.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 121.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 121.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 94.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

356.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 71.5
FF:10164-103B2 76 years, female 71.5
Nucleus accumbens
Scaled Tags Per Million: 356.8
FF:10037-101F1 23-56 years, mixed 356.8
Putamen
Scaled Tags Per Million: 100.4
FF:10176-103C5 60 years, female 100.4
Globus pallidus
Scaled Tags Per Million: 243.5
FF:10175-103C4 60 years, female 332.7
FF:10161-103A8 76 years, female 154.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

498.6
Pig sample Sample description nTPM
Caudate
nTPM: 227.3
Samples: 4

Max nTPM: 265.0
Min nTPM: 207.7
Sample A Female 265.0
Sample B Female 215.8
Sample C Male 220.5
Sample D Male 207.7
Putamen
nTPM: 433.8
Samples: 4

Max nTPM: 699.4
Min nTPM: 242.3
Sample A Female 699.4
Sample B Female 242.3
Sample C Male 353.4
Sample D Male 440.1
Septum
nTPM: 498.6
Samples: 4

Max nTPM: 728.7
Min nTPM: 390.0
Sample A Female 479.4
Sample B Female 390.0
Sample C Male 728.7
Sample D Male 396.2
Ventral pallidum
nTPM: 472.5
Samples: 4

Max nTPM: 711.4
Min nTPM: 239.0
Sample A Female 239.0
Sample B Female 425.9
Sample C Male 711.4
Sample D Male 513.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

975.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 604.2
Samples: 4

Max nTPM: 857.6
Min nTPM: 395.0
Sample A Male 413.9
Sample B Male 395.0
Sample C Female 857.6
Sample D Female 750.1
Septum
nTPM: 755.9
Samples: 4

Max nTPM: 887.5
Min nTPM: 618.5
Sample A Male 873.4
Sample B Male 618.5
Sample C Female 887.5
Sample D Female 644.1
Ventral forebrain
nTPM: 975.4
Samples: 4

Max nTPM: 1058.8
Min nTPM: 810.2
Sample A Male 1014.4
Sample B Male 810.2
Sample C Female 1018.2
Sample D Female 1058.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.3
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 4.3
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 4.2
Pallidum
Expression energy: 6.5
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 7.6
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 5.3

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