HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:111.2 nTPM
HPA Brain:377.4 nTPM
GTEx:111.2 nTPM
FANTOM5:200.5 Scaled Tags Per Million
Pig:146.8 nTPM
Mouse:420.9 nTPM
Allen mouse:21.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003001Antibody CAB000109
Glial cells HighLow
Neuronal cells HighMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 377.4
Sample id Sample description nTPM
Hippocampus
nTPM: 280.1
1855 Male, age 76, left hemisphere 317.1
1898 Male, age 80, left hemisphere 314.5
2621 Female, age 67, right hemisphere 294.2
2529 Female, age 94, left hemisphere 268.9
2148 Female, age 91, left hemisphere 252.6
1911 Female, age 85, right hemisphere 233.6
Dentate gyrus
nTPM: 284.8
2530 Female, age 94, left hemisphere 372.3
2528 Male, age 74, both hemispheres 338.1
2010 Male, age 76, both hemispheres 324.8
1927 Female, age 91, both hemispheres 265.6
2246 Female, age 85, both hemispheres 221.2
2531 Female, age 67, both hemispheres 186.6
Entorhinal gyrus
nTPM: 248.6
2117 Female, age 91, right hemisphere 361.2
1787 Male, age 76, left hemisphere 276.8
2764 Male, age 80, right hemisphere 274.6
1938 Female, age 85, left hemisphere 231.8
2613 Female, age 94, left hemisphere 230.1
2686 Male, age 75, right hemisphere 117.0
Hippocampus, CA1
nTPM: 275.2
2749 Male, age 80, left hemisphere 361.6
1873 Female, age 85, both hemispheres 279.3
2527 Male, age 74, both hemispheres 275.1
2082 Female, age 91, right hemisphere 234.5
2045 Male, age 76, both hemispheres 225.7
Hippocampus, CA2
nTPM: 329.0
2249 Male, age 74, both hemispheres 522.9
1892 Male, age 76, both hemispheres 335.4
1963 Male, age 80, left hemisphere 321.2
1940 Female, age 85, left hemisphere 278.9
2437 Female, age 94, left hemisphere 265.4
2113 Female, age 91, right hemisphere 250.3
Hippocampus, CA3
nTPM: 377.4
2436 Male, age 74, both hemispheres 1061.7
1867 Male, age 76, both hemispheres 311.2
2137 Male, age 80, left hemisphere 237.2
1891 Female, age 85, both hemispheres 234.0
2620 Female, age 94, left hemisphere 228.5
2861 Female, age 67, both hemispheres 191.9
Parahippocampal cortex
nTPM: 218.3
2250 Female, age 67, right hemisphere 260.9
2245 Female, age 91, both hemispheres 255.7
1990 Female, age 91, right hemisphere 255.6
1850 Male, age 80, both hemispheres 243.4
2018 Male, age 76, both hemispheres 240.9
1933 Female, age 85, both hemispheres 232.5
2532 Female, age 72, left hemisphere 204.5
2693 Female, age 94, both hemispheres 177.9
2622 Female, age 67, right hemisphere 166.5
2692 Male, age 74, both hemispheres 145.5
Perirhinal gyrus
nTPM: 233.2
1847 Female, age 91, left hemisphere 264.2
1794 Male, age 80, right hemisphere 250.7
1841 Female, age 85, right hemisphere 222.4
2848 Male, age 76, right hemisphere 221.6
2521 Female, age 94, right hemisphere 206.9
Subiculum
nTPM: 255.8
2042 Male, age 76, both hemispheres 294.7
1901 Male, age 80, both hemispheres 287.6
2729 Female, age 91, right hemisphere 273.2
2619 Male, age 74, both hemispheres 255.9
1977 Female, age 85, both hemispheres 239.5
2438 Female, age 94, left hemisphere 183.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 111.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.2
Samples: 197

Max nTPM: 487.4
Min nTPM: 23.7
Std nTPM: 50.6
Median nTPM: 102.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 487.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 299.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 295.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 280.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 229.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 214.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 204.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 197.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 196.1
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 191.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 189.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 200.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.5
FF:10153-102I9 76 years, female 233.7
FF:10169-103B7 60 years, female 167.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 146.8
Pig sample Sample description nTPM
Subiculum
nTPM: 127.7
Samples: 4

Max nTPM: 149.2
Min nTPM: 116.8
Sample A Female 149.2
Sample B Female 119.1
Sample C Male 116.8
Sample D Male 125.7
Dorsal hippocampus
nTPM: 146.8
Samples: 4

Max nTPM: 187.2
Min nTPM: 100.6
Sample A Female 187.2
Sample B Female 142.0
Sample C Male 157.3
Sample D Male 100.6
Entorhinal cortex
nTPM: 121.2
Samples: 4

Max nTPM: 135.7
Min nTPM: 109.9
Sample A Female 112.7
Sample B Female 126.4
Sample C Male 135.7
Sample D Male 109.9
Ventral hippocampus
nTPM: 146.1
Samples: 4

Max nTPM: 178.8
Min nTPM: 103.7
Sample A Female 146.4
Sample B Female 103.7
Sample C Male 178.8
Sample D Male 155.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 420.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 383.6
Samples: 4

Max nTPM: 417.5
Min nTPM: 348.0
Sample A Male 367.1
Sample B Male 348.0
Sample C Female 401.9
Sample D Female 417.5
Hippocampal formation
nTPM: 420.9
Samples: 4

Max nTPM: 491.0
Min nTPM: 353.9
Sample A Male 383.1
Sample B Male 353.9
Sample C Female 455.6
Sample D Female 491.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 21.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.8
69028479 Antisense, RP_050316_01_D05, Mouse strain C57BL/6J (56 days, male) 21.8

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