PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:516.2 nTPM
FANTOM5:406.4 Scaled Tags Per Million
Pig:227.4 nTPM
Mouse:446.4 nTPM
Allen mouse:16.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 516.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 291.1
2090 Male, age 80, both hemispheres 318.4
2188 Female, age 91, both hemispheres 294.7
2301 Female, age 85, both hemispheres 279.6
1984 Male, age 76, both hemispheres 271.7
Area postrema
nTPM: 376.8
2799 Male, age 61, both hemispheres 423.8
2306 Male, age 80, both hemispheres 418.3
2054 Male, age 76, both hemispheres 288.1
Dorsal cochlear nucleus
nTPM: 311.8
2370 Male, age 61, both hemispheres 380.4
2187 Female, age 91, both hemispheres 322.9
2378 Male, age 80, both hemispheres 296.5
2058 Male, age 76, both hemispheres 286.4
2802 Male, age 74, right hemisphere 273.0
Dorsal medullary reticular nucleus
nTPM: 309.6
2040 Female, age 85, both hemispheres 381.5
2373 Male, age 61, both hemispheres 288.9
2088 Male, age 76, both hemispheres 258.5
Dorsal motor vagal complex
nTPM: 297.0
2000 Male, age 74, unknown 362.0
2844 Male, age 55, unknown 354.7
2133 Female, age 91, both hemispheres 346.5
2185 Male, age 76, both hemispheres 311.0
2797 Male, age 61, both hemispheres 266.9
2813 Female, age 72, unknown 258.3
2643 Male, age 74, both hemispheres 244.1
2807 Female, age 85, both hemispheres 232.4
Dorsal tegmental nucleus
nTPM: 358.4
2358 Male, age 61, both hemispheres 483.1
2083 Male, age 80, both hemispheres 350.0
2326 Male, age 74, both hemispheres 312.2
1936 Male, age 76, left hemisphere 288.2
Dorsolateral tegmental area
nTPM: 471.7
2337 Male, age 61, both hemispheres 1038.2
2360 Male, age 74, both hemispheres 379.0
2654 Male, age 80, both hemispheres 354.2
2751 Female, age 85, both hemispheres 320.3
2141 Male, age 76, both hemispheres 266.7
Gigantocellular reticular nuclei, medullary
nTPM: 322.3
2462 Male, age 74, both hemispheres 442.9
2314 Male, age 61, both hemispheres 359.0
2310 Male, age 80, both hemispheres 333.0
1876 Female, age 85, both hemispheres 305.3
2387 Female, age 91, both hemispheres 261.7
2022 Male, age 76, right hemisphere 231.7
Gigantocellular reticular nuclei, pars
nTPM: 309.0
2168 Male, age 76, both hemispheres 335.1
2336 Male, age 61, both hemispheres 331.3
2084 Female, age 85, both hemispheres 323.8
2330 Male, age 80, both hemispheres 281.8
2706 Male, age 80, both hemispheres 272.9
Inferior olive
nTPM: 353.5
2563 Male, age 74, both hemispheres 409.7
2178 Male, age 61, both hemispheres 398.4
2085 Female, age 85, both hemispheres 348.8
2379 Male, age 80, both hemispheres 310.3
2628 Female, age 91, both hemispheres 300.4
Kolliker-Fuse nucleus
nTPM: 360.7
2163 Male, age 80, both hemispheres 407.8
2315 Male, age 76, right hemisphere 378.3
2793 Female, age 91, left hemisphere 295.9
Lateral lemniscal nuclei
nTPM: 342.7
2746 Female, age 85, left hemisphere 489.5
2036 Male, age 80, both hemispheres 330.4
2169 Male, age 76, both hemispheres 324.8
2453 Male, age 74, right hemisphere 295.8
2320 Female, age 91, left hemisphere 272.8
Lateral medullary reticular nucleus
nTPM: 429.4
2305 Male, age 74, both hemispheres 699.9
2852 Male, age 80, both hemispheres 490.0
2044 Male, age 76, both hemispheres 384.4
2190 Female, age 85, both hemispheres 342.1
2374 Male, age 61, both hemispheres 332.4
2804 Female, age 91, both hemispheres 327.5
Lateral parabrachial nucleus
nTPM: 365.0
2139 Female, age 85, right hemisphere 387.1
2013 Male, age 80, both hemispheres 387.0
2790 Male, age 61, both hemispheres 350.3
2792 Male, age 76, both hemispheres 335.4
Lateral vestibular nucleus
nTPM: 384.1
2184 Male, age 76, both hemispheres 416.3
2311 Male, age 80, both hemispheres 352.0
Locus coeruleus
nTPM: 409.2
2014 Male, age 55, unknown 490.7
2123 Female, age 91, both hemispheres 489.4
2317 Female, age 72, unknown 455.8
1980 Male, age 76, both hemispheres 453.6
2162 Male, age 80, both hemispheres 363.0
2788 Male, age 74, unknown 320.9
2720 Male, age 74, both hemispheres 291.1
Medial olivary nucleus
nTPM: 418.8
1943 Male, age 61, both hemispheres 531.4
1962 Male, age 76, both hemispheres 420.5
2851 Male, age 80, both hemispheres 376.5
2138 Female, age 91, both hemispheres 346.7
Medial parabrachial nucleus
nTPM: 327.5
2170 Female, age 91, both hemispheres 379.7
2156 Male, age 61, both hemispheres 357.2
2854 Male, age 80, both hemispheres 319.0
2463 Female, age 85, right hemisphere 302.3
2786 Male, age 76, both hemispheres 279.6
Medial periolivary nuclei
nTPM: 380.2
2081 Male, age 80, both hemispheres 464.7
2791 Male, age 74, right hemisphere 454.0
2171 Female, age 85, both hemispheres 378.1
2063 Male, age 76, both hemispheres 364.0
2458 Female, age 91, both hemispheres 240.0
Medial vestibular nucleus
nTPM: 350.5
2134 Male, age 76, both hemispheres 416.2
2624 Male, age 61, both hemispheres 388.5
2801 Male, age 74, both hemispheres 380.8
2093 Male, age 80, both hemispheres 325.6
2803 Female, age 91, both hemispheres 299.5
2743 Female, age 85, both hemispheres 292.4
Motor facial nucleus
nTPM: 327.2
2365 Male, age 74, right hemisphere 463.5
2062 Male, age 76, both hemispheres 389.6
2126 Male, age 61, both hemispheres 346.4
2327 Male, age 80, both hemispheres 267.6
2697 Female, age 85, both hemispheres 256.0
2795 Female, age 91, both hemispheres 240.0
Motor hypoglossal nucleus
nTPM: 313.2
2182 Male, age 80, both hemispheres 375.3
2125 Female, age 91, both hemispheres 345.5
2132 Female, age 85, both hemispheres 304.9
2277 Male, age 76, both hemispheres 299.1
2461 Male, age 61, both hemispheres 241.0
Motor trigeminal nucleus
nTPM: 327.8
2335 Male, age 61, both hemispheres 393.5
2079 Male, age 80, both hemispheres 381.2
2560 Male, age 74, both hemispheres 327.8
2309 Male, age 76, both hemispheres 273.8
2321 Female, age 91, both hemispheres 262.5
Nuclei of the trapezoid body
nTPM: 319.7
1983 Male, age 76, both hemispheres 364.1
2159 Male, age 61, both hemispheres 345.1
2735 Female, age 85, both hemispheres 337.7
2166 Male, age 80, both hemispheres 292.1
2368 Female, age 91, both hemispheres 259.3
Nucleus ambiguus
nTPM: 387.6
2071 Male, age 76, both hemispheres 396.0
2096 Female, age 85, both hemispheres 379.2
Nucleus cuneatus
nTPM: 332.1
2564 Male, age 74, both hemispheres 429.6
2380 Male, age 80, both hemispheres 398.2
2376 Male, age 61, both hemispheres 362.0
2808 Female, age 85, both hemispheres 354.1
2131 Male, age 76, both hemispheres 346.8
2100 Male, age 76, both hemispheres 327.2
2381 Male, age 80, both hemispheres 316.7
2562 Male, age 61, both hemispheres 287.0
2805 Female, age 91, both hemispheres 167.4
Nucleus gracilis
nTPM: 386.0
2627 Male, age 74, both hemispheres 473.3
2382 Male, age 80, both hemispheres 354.7
2299 Female, age 85, both hemispheres 329.9
Nucleus raphe magnus
nTPM: 364.1
2051 Male, age 76, both hemispheres 508.3
2455 Male, age 74, both hemispheres 389.3
2172 Female, age 85, both hemispheres 366.7
2160 Male, age 61, both hemispheres 346.4
2328 Male, age 80, both hemispheres 287.2
2459 Female, age 91, both hemispheres 286.7
Nucleus raphe obscurus
nTPM: 369.3
2142 Male, age 76, midline 409.7
2800 Male, age 61, midline 365.3
2845 Female, age 85, midline 332.8
Nucleus raphe pallidus
nTPM: 516.2
1924 Male, age 61, midline 734.3
2183 Male, age 80, midline 425.0
2145 Male, age 76, midline 389.3
Nucleus tractus solitarii
nTPM: 270.6
2307 Male, age 80, both hemispheres 301.8
2191 Female, age 85, both hemispheres 282.1
2656 Male, age 76, both hemispheres 276.5
2144 Female, age 91, right hemisphere 221.9
Paramedian reticular nucleus
nTPM: 341.7
2057 Male, age 80, both hemispheres 389.9
2313 Male, age 61, both hemispheres 381.2
2050 Female, age 85, both hemispheres 344.0
2052 Male, age 76, both hemispheres 251.5
Parvicellular reticular nuclei
nTPM: 341.9
2119 Male, age 80, both hemispheres 397.5
2095 Male, age 76, both hemispheres 321.0
2558 Male, age 74, both hemispheres 307.1
Parvicellular reticular nuclei, medullary
nTPM: 313.1
2091 Female, age 85, both hemispheres 336.2
2189 Female, age 91, both hemispheres 328.8
2181 Male, age 80, left hemisphere 274.4
Pedunculopontine tegmental nucleus
nTPM: 355.9
2338 Male, age 61, both hemispheres 450.5
2334 Male, age 80, both hemispheres 345.1
1921 Female, age 85, both hemispheres 271.9
Peritrigeminal nucleus
nTPM: 405.4
2067 Female, age 85, both hemispheres 471.9
2179 Male, age 61, both hemispheres 380.1
2136 Male, age 76, both hemispheres 364.0
Pontine nuclei
nTPM: 397.8
2115 Male, age 80, left hemisphere 499.2
2109 Female, age 72, unknown 446.2
2787 Female, age 85, both hemispheres 440.8
1863 Male, age 55, unknown 394.4
2727 Male, age 61, right hemisphere 382.0
1968 Male, age 76, left hemisphere 377.8
2454 Male, age 74, left hemisphere 329.5
2319 Female, age 91, both hemispheres 312.5
Pontine raphe nucleus
nTPM: 323.9
2853 Male, age 76, midline 339.7
2122 Female, age 85, midline 308.2
Posteroventral cochlear nucleus
nTPM: 314.7
2371 Male, age 61, both hemispheres 390.5
2070 Male, age 76, both hemispheres 309.3
2341 Male, age 80, both hemispheres 307.4
2752 Female, age 85, both hemispheres 286.1
2135 Female, age 91, both hemispheres 280.2
Prepositus hypoglossal nucleus
nTPM: 316.3
2855 Female, age 85, right hemisphere 328.2
2086 Male, age 80, both hemispheres 304.3
Principal sensory trigeminal nucleus
nTPM: 323.6
2324 Male, age 76, both hemispheres 360.3
2158 Male, age 61, both hemispheres 340.5
2008 Male, age 80, left hemisphere 300.5
2367 Female, age 91, left hemisphere 293.2
Reticular pontine nucleus, caudal
nTPM: 309.4
2092 Male, age 76, both hemispheres 349.5
2332 Male, age 80, right hemisphere 328.9
2559 Male, age 74, both hemispheres 295.1
2457 Female, age 91, both hemispheres 264.1
Reticular pontine nucleus, oral
nTPM: 343.2
2361 Male, age 74, both hemispheres 431.6
1939 Male, age 80, both hemispheres 375.0
2012 Female, age 85, both hemispheres 329.0
2167 Male, age 76, both hemispheres 315.4
2366 Female, age 91, both hemispheres 265.3
Reticulotegmental nucleus
nTPM: 311.6
2333 Male, age 80, both hemispheres 346.7
2325 Male, age 76, both hemispheres 319.3
2452 Male, age 74, both hemispheres 291.5
2322 Female, age 91, both hemispheres 289.1
Spinal trigeminal nucleus, caudal
nTPM: 340.2
2390 Female, age 91, both hemispheres 378.0
2447 Male, age 76, both hemispheres 358.7
2308 Male, age 80, both hemispheres 341.9
2312 Male, age 61, both hemispheres 327.5
2642 Male, age 74, both hemispheres 294.8
Spinal trigeminal nucleus, interpolar
nTPM: 358.3
2625 Male, age 61, both hemispheres 468.2
2066 Male, age 76, right hemisphere 396.6
2033 Male, age 80, both hemispheres 364.9
2386 Female, age 85, both hemispheres 288.7
2389 Female, age 91, both hemispheres 273.0
Spinal trigeminal nucleus, oral
nTPM: 317.5
2164 Male, age 80, both hemispheres 394.7
2737 Female, age 85, both hemispheres 297.5
1978 Male, age 76, both hemispheres 260.4
Spinal vestibular nucleus
nTPM: 307.2
2796 Male, age 61, both hemispheres 348.3
2780 Male, age 80, both hemispheres 337.7
2186 Female, age 91, both hemispheres 314.7
2748 Male, age 76, both hemispheres 307.9
2806 Female, age 85, both hemispheres 276.2
2384 Male, age 74, both hemispheres 258.5
Subcoeruleus area
nTPM: 294.7
2369 Female, age 85, left hemisphere 322.4
1958 Male, age 80, both hemispheres 306.0
2323 Female, age 91, left hemisphere 303.2
2089 Male, age 76, left hemisphere 276.7
2451 Male, age 74, both hemispheres 265.2
Superior olive
nTPM: 345.2
2364 Male, age 74, right hemisphere 517.6
2020 Male, age 76, both hemispheres 317.7
1875 Female, age 85, both hemispheres 303.9
2329 Male, age 80, right hemisphere 301.2
2561 Female, age 91, both hemispheres 285.7
Superior vestibular nucleus
nTPM: 341.3
2015 Male, age 80, both hemispheres 348.5
2383 Male, age 74, both hemispheres 343.2
2061 Male, age 76, both hemispheres 332.2
Ventral medullary reticular nucleus
nTPM: 313.1
2372 Male, age 61, both hemispheres 323.6
2060 Male, age 76, both hemispheres 302.6
Ventral periolivary nuclei
nTPM: 305.9
2165 Male, age 80, both hemispheres 348.2
2130 Female, age 85, both hemispheres 315.8
2023 Male, age 76, both hemispheres 308.1
2794 Female, age 91, left hemisphere 251.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 363.6
1986 Male, age 76, both hemispheres 381.4
2180 Male, age 61, both hemispheres 376.7
2118 Male, age 80, both hemispheres 369.4
2741 Female, age 85, both hemispheres 363.3
2302 Female, age 91, both hemispheres 327.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 385.2
2359 Male, age 61, both hemispheres 553.6
2161 Male, age 80, both hemispheres 416.9
2840 Female, age 85, both hemispheres 391.5
2449 Male, age 74, both hemispheres 354.3
1959 Male, age 76, both hemispheres 337.2
2456 Female, age 91, both hemispheres 257.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 406.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 264.1
FF:10182-103D2 60 years, female 267.8
FF:10165-103B3 76 years, female 260.5
Medulla oblongata
Scaled Tags Per Million: 406.4
FF:10174-103C3 60 years, female 431.0
FF:10155-103A2 76 years, female 415.6
FF:10038-101F2 18-64 years, mixed 372.5
Pons
Scaled Tags Per Million: 277.1
FF:10033-101E6 18-54 years, mixed 277.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 227.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 227.4
Samples: 4

Max nTPM: 265.0
Min nTPM: 188.4
Sample A Female 188.4
Sample B Female 202.0
Sample C Male 254.0
Sample D Male 265.0
Pons
nTPM: 205.5
Samples: 4

Max nTPM: 225.9
Min nTPM: 174.8
Sample A Female 222.8
Sample B Female 174.8
Sample C Male 198.5
Sample D Male 225.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 446.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 446.4
Samples: 4

Max nTPM: 461.3
Min nTPM: 422.0
Sample A Male 422.0
Sample B Male 457.3
Sample C Female 461.3
Sample D Female 444.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.7
69028479 Antisense, RP_050316_01_D05, Mouse strain C57BL/6J (56 days, male) 16.7
Pons
Expression energy: 15.6
69028479 Antisense, RP_050316_01_D05, Mouse strain C57BL/6J (56 days, male) 15.6

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