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RPS25
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:528.1 nTPM
FANTOM5:700.2 Scaled Tags Per Million
Pig:203.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031801
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

528.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 528.1
Samples: 246

Max nTPM: 1252.7
Min nTPM: 215.0
Std nTPM: 140.7
Median nTPM: 512.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1252.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1039.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 994.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 965.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 964.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 935.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 928.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 907.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 877.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 838.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 812.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 794.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 792.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 774.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 763.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 739.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 732.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 729.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 728.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 725.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 718.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 711.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 704.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 694.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 688.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 683.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 679.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 672.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 667.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 667.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 664.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 660.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 657.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 655.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 652.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 650.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 649.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 648.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 645.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 643.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 642.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 642.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 642.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 641.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 634.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 630.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 626.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 626.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 619.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 616.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 616.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 610.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 606.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 603.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 602.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 596.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 595.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 592.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 591.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 591.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 590.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 589.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 589.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 582.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 580.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 577.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 576.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 573.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 573.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 569.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 567.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 565.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 564.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 563.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 563.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 561.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 560.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 557.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 557.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 556.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 556.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 554.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 553.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 552.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 552.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 549.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 549.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 547.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 545.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 544.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 542.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 540.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 540.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 539.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 538.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 538.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 538.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 537.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 537.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 536.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 536.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 534.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 533.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 531.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 530.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 529.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 528.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 526.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 524.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 523.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 523.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 522.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 522.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 520.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 520.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 520.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 519.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 517.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 516.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 516.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 515.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 513.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 512.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 511.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 509.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 508.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 507.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 506.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 505.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 502.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 500.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 499.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 497.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 495.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 494.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 493.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 487.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 485.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 484.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 484.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 483.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 482.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 482.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 481.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 480.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 480.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 479.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 478.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 475.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 472.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 472.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 472.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 471.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 466.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 465.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 464.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 464.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 464.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 464.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 463.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 462.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 461.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 461.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 460.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 460.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 460.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 459.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 457.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 455.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 455.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 453.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 451.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 448.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 445.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 442.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 441.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 439.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 438.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 438.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 437.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 436.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 435.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 433.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 431.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 431.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 430.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 429.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 428.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 427.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 427.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 426.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 425.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 424.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 423.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 420.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 419.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 415.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 415.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 414.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 414.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 413.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 410.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 410.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 409.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 408.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 407.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 405.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 403.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 400.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 399.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 399.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 398.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 398.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 396.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 390.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 390.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 389.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 389.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 389.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 388.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 387.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 386.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 381.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 378.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 377.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 377.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 375.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 372.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 371.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 365.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 361.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 360.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 359.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 356.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 351.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 349.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 346.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 339.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 337.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 333.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 331.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 328.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 326.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 322.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 239.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 215.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

700.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 700.2
FF:10164-103B2 76 years, female 700.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.2
Pig sample Sample description nTPM
Caudate
nTPM: 203.2
Samples: 4

Max nTPM: 220.8
Min nTPM: 183.6
Sample A Female 220.8
Sample B Female 194.1
Sample C Male 214.4
Sample D Male 183.6

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