We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS25
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPS25
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:973.7 nTPM
GTEx:973.7 nTPM
FANTOM5:1830.3 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031801
Squamous epithelial cells High


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

973.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 973.7
Samples: 156

Max nTPM: 2103.4
Min nTPM: 603.0
Std nTPM: 243.5
Median nTPM: 941.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2103.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2088.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1557.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1541.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1446.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1443.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1423.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1413.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1400.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1399.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1379.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1369.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1366.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1358.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1275.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1259.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1225.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1216.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1211.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1204.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1189.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1175.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1174.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1161.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1159.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1155.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1154.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1152.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1151.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1148.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1147.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1127.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1125.4
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1123.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1117.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1114.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1114.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1113.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1107.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1105.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1095.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1088.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1084.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1084.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1079.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1071.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1063.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1062.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1058.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1056.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1051.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1047.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1043.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1038.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1024.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1018.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1017.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1015.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1007.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1007.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1006.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1004.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 999.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 997.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 993.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 988.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 988.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 987.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 981.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 978.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 975.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 973.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 959.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 959.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 958.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 953.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 949.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 946.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 937.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 932.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 932.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 930.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 930.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 928.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 923.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 907.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 906.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 902.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 889.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 874.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 874.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 869.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 868.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 868.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 859.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 853.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 851.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 847.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 846.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 845.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 845.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 842.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 840.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 834.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 831.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 827.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 826.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 824.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 810.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 809.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 804.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 804.5
GTEX-QCQG-1226-SM-48U23 50-59 years, female 801.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 799.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 798.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 797.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 793.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 792.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 791.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 790.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 789.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 786.0
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 784.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 781.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 781.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 778.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 775.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 772.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 771.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 766.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 765.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 763.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 756.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 755.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 752.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 750.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 747.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 746.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 726.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 718.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 705.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 701.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 695.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 694.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 691.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 679.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 677.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 670.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 667.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 666.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 654.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 652.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 651.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 619.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 618.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 603.0
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1830.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1830.3
FF:10204-103F6 68 years, female 1830.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org