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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:131.9 nTPM
HPA Brain:68.7 nTPM
GTEx:131.9 nTPM
FANTOM5:182.1 Scaled Tags Per Million
Pig:38.7 nTPM
Mouse:70.9 nTPM
Allen mouse:2.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027971Antibody HPA063572Antibody CAB018370
Glial cells MediumLowHigh
Neuronal cells Not detectedNot detectedNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 68.7
2481 Female, age 94, left hemisphere 79.5
1857 Female, age 85, left hemisphere 72.2
2289 Male, age 61, right hemisphere 69.7
1854 Male, age 80, left hemisphere 69.5
2290 Female, age 72, unknown 68.9
2846 Female, age 79, unknown 66.2
2288 Male, age 75, left hemisphere 63.1
1781 Male, age 74, unknown 60.4
Globus pallidus, externus
nTPM: 56.5
1996 Male, age 80, right hemisphere 61.1
2395 Male, age 75, both hemispheres 58.7
2646 Male, age 61, right hemisphere 56.5
2772 Female, age 79, unknown 56.2
2567 Female, age 72, unknown 50.2
Globus pallidus, internus
nTPM: 63.4
2111 Female, age 85, right hemisphere 72.7
2778 Female, age 91, both hemispheres 69.4
2287 Male, age 75, right hemisphere 66.5
2037 Male, age 80, right hemisphere 62.3
1818 Male, age 74, unknown 58.4
2483 Female, age 94, right hemisphere 58.0
2566 Female, age 72, unknown 56.2
Nucleus accumbens
nTPM: 65.6
2391 Female, age 94, left hemisphere 76.0
2698 Female, age 72, unknown 75.9
2286 Male, age 75, left hemisphere 69.2
1806 Female, age 85, left hemisphere 66.3
2824 Male, age 61, right hemisphere 65.0
2732 Male, age 80, right hemisphere 58.6
1783 Male, age 74, unknown 57.1
1856 Female, age 91, right hemisphere 57.0
Nucleus basalis of Meynert
nTPM: 57.2
2821 Male, age 75, both hemispheres 71.3
2393 Male, age 80, right hemisphere 59.4
2484 Female, age 94, left hemisphere 52.5
2569 Male, age 61, both hemispheres 45.8
Nucleus of the diagonal band
nTPM: 58.0
1979 Male, age 74, unknown 71.4
1812 Female, age 91, both hemispheres 57.8
2029 Male, age 61, right hemisphere 56.5
2195 Female, age 85, both hemispheres 55.9
2775 Male, age 80, right hemisphere 48.4
Putamen
nTPM: 62.9
2482 Female, age 94, left hemisphere 76.9
1838 Male, age 80, right hemisphere 73.3
1937 Female, age 91, right hemisphere 67.0
1829 Male, age 74, unknown 62.0
2489 Female, age 72, unknown 57.7
2647 Male, age 75, left hemisphere 52.4
2466 Female, age 79, unknown 50.8
Septal nuclei
nTPM: 58.8
2199 Male, age 80, right hemisphere 73.8
2629 Female, age 94, right hemisphere 73.1
2009 Female, age 91, both hemispheres 57.4
2059 Female, age 85, both hemispheres 54.5
2031 Female, age 72, unknown 54.2
1960 Male, age 74, unknown 49.9
2394 Male, age 61, left hemisphere 48.6
Stria terminalis, bed nucleus
nTPM: 50.6
2486 Female, age 94, both hemispheres 52.8
1974 Female, age 91, both hemispheres 52.3
2201 Male, age 74, unknown 46.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 131.9
Samples: 246

Max nTPM: 269.2
Min nTPM: 66.3
Std nTPM: 28.5
Median nTPM: 130.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 269.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 239.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 229.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 215.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 204.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 198.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 197.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 196.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 196.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 190.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 184.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 183.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 182.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 181.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 180.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 177.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 176.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 174.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 170.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 169.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 168.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 167.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 166.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 164.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 163.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 163.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 162.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 160.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 160.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 159.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 158.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 157.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 156.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 156.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 156.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 155.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 155.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 155.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 155.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 154.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 153.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 152.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 152.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 151.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 151.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 151.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 151.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 151.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 150.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 150.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 150.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 150.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 149.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 149.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 149.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 148.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 148.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 148.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 147.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 146.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 146.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 145.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 145.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 145.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 145.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 145.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 145.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 144.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 144.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 144.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 144.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 144.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 144.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 144.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 144.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 144.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 144.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 143.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 143.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 143.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 142.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 142.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 141.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 141.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 141.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 140.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 140.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 140.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 139.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 139.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 139.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 139.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 139.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 138.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 138.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 138.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 138.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 137.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 137.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 136.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 136.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 135.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 135.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 135.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 135.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 134.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 133.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 133.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 133.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 133.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 133.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 133.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 133.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 133.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 133.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 132.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 132.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 131.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 131.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 130.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 130.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 129.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 129.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 128.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 128.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 127.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 127.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 126.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 125.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 125.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 124.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 124.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 123.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 123.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 123.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 123.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 123.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 123.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 123.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 123.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 123.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 122.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 122.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 121.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 121.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 121.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 121.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 120.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 120.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 119.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 119.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 118.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 118.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 118.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 118.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 118.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 117.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 117.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 117.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 116.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 116.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 116.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 116.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 116.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 116.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 116.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 116.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 115.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 115.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 114.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 114.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 114.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 114.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 113.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 113.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 112.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 112.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 112.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 112.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 111.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 111.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 111.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 110.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 110.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 109.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 109.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 109.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 108.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 107.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 107.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 107.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 107.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 106.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 106.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 106.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 105.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 105.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 105.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 105.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 104.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 103.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 102.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 102.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 102.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 101.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 100.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 99.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 99.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 99.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 98.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 98.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 97.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 97.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 97.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 96.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 95.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 95.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 93.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 91.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 90.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 90.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 90.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 90.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 90.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 87.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 86.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 85.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 83.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 81.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 81.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 78.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 66.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 131.7
Samples: 246

Max nTPM: 411.4
Min nTPM: 47.5
Std nTPM: 36.9
Median nTPM: 126.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 411.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 358.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 218.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 211.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 210.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 206.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 201.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 197.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 191.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 191.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 190.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 189.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 188.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 185.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 184.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 181.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 178.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 176.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 176.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 175.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 174.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 174.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 173.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 171.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 171.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 171.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 169.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 168.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 168.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 165.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 165.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 165.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 164.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 164.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 162.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 161.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 160.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 159.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 158.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 157.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 157.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 157.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 155.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 155.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 154.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 154.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 154.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 153.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 152.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 152.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 152.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 151.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 151.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 150.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 149.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 149.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 149.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 149.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 149.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 149.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 148.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 148.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 148.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 147.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 147.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 146.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 146.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 145.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 145.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 144.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 144.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 143.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 142.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 140.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 139.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 139.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 139.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 138.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 138.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 138.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 138.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 138.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 137.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 137.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 137.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 136.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 136.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 135.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 135.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 135.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 134.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 134.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 134.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 134.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 133.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 133.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 133.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 133.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 132.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 132.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 132.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 132.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 132.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 132.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 132.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 132.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 131.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 131.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 130.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 130.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 130.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 129.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 129.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 129.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 128.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 128.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 128.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 127.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 127.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 127.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 126.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 126.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 126.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 126.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 126.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 126.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 125.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 125.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 125.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 125.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 125.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 125.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 125.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 125.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 125.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 125.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 124.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 124.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 124.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 123.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 123.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 123.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 123.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 122.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 122.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 122.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 121.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 121.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 121.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 120.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 119.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 119.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 119.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 119.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 118.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 118.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 118.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 118.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 118.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 118.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 118.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 117.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 117.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 116.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 116.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 116.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 115.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 115.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 114.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 114.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 114.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 114.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 113.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 113.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 113.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 113.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 113.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 112.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 111.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 111.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 111.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 110.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 110.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 110.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 110.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 109.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 109.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 109.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 109.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 108.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 107.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 107.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 107.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 107.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 107.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 106.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 106.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 105.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 104.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 104.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 104.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 104.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 104.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 104.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 104.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 104.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 103.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 102.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 102.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 102.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 101.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 100.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 100.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 99.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 98.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 98.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 98.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 98.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 98.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 97.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 97.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 97.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 96.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 96.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 95.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 94.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 93.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 93.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 93.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 90.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 88.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 87.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 87.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 84.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 83.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 83.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 82.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 76.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 75.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 74.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 74.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 72.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 71.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 56.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 47.5
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Brain - Putamen (basal ganglia)
Average nTPM: 127.4
Samples: 205

Max nTPM: 297.1
Min nTPM: 72.5
Std nTPM: 27.9
Median nTPM: 124.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 297.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 216.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 207.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 200.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 198.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 187.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 183.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 180.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 178.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 178.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 176.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 175.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 171.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 170.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 170.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 167.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 165.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 165.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 164.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 164.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 164.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 164.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 162.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 162.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 161.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 160.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 159.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 157.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 155.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 153.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 153.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 152.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 151.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 151.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 150.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 148.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 147.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 147.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 145.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 145.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 145.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 144.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 144.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 143.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 143.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 142.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 142.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 142.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 142.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 140.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 140.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 139.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 138.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 138.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 136.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 136.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 136.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 136.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 135.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 135.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 134.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 134.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 134.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 134.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 134.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 132.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 132.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 131.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 131.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 130.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 130.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 130.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 129.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 129.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 129.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 129.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 129.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 129.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 129.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 129.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 129.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 128.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 128.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 128.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 128.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 128.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 128.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 128.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 128.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 127.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 127.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 127.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 127.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 127.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 126.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 126.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 126.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 126.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 125.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 124.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 124.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 124.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 124.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 123.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 123.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 123.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 123.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 123.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 123.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 123.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 122.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 122.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 121.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 121.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 121.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 121.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 119.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 119.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 119.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 118.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 118.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 117.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 117.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 117.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 117.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 116.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 116.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 116.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 115.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 115.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 115.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 115.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 115.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 114.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 114.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 113.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 112.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 112.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 112.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 111.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 111.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 111.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 111.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 111.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 111.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 110.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 109.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 109.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 109.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 109.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 109.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 109.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 109.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 108.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 108.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 108.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 107.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 107.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 106.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 106.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 106.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 106.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 106.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 106.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 106.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 106.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 105.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 105.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 105.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 104.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 104.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 104.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 103.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 103.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 103.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 103.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 102.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 102.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 102.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 101.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 101.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 100.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 100.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 99.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 99.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 99.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 99.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 98.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 98.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 97.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 94.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 93.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 93.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 93.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 92.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 90.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 89.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 88.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 87.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 84.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 83.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 83.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 78.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 76.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 72.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

182.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 182.1
FF:10164-103B2 76 years, female 182.1
Nucleus accumbens
Scaled Tags Per Million: 87.5
FF:10037-101F1 23-56 years, mixed 87.5
Putamen
Scaled Tags Per Million: 135.4
FF:10176-103C5 60 years, female 135.4
Globus pallidus
Scaled Tags Per Million: 181.7
FF:10161-103A8 76 years, female 192.3
FF:10175-103C4 60 years, female 171.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.7
Pig sample Sample description nTPM
Caudate
nTPM: 37.5
Samples: 4

Max nTPM: 42.0
Min nTPM: 31.0
Sample A Female 42.0
Sample B Female 36.2
Sample C Male 40.9
Sample D Male 31.0
Putamen
nTPM: 33.6
Samples: 4

Max nTPM: 35.6
Min nTPM: 31.7
Sample A Female 31.7
Sample B Female 32.2
Sample C Male 35.6
Sample D Male 34.7
Septum
nTPM: 38.7
Samples: 4

Max nTPM: 45.9
Min nTPM: 35.6
Sample A Female 45.9
Sample B Female 36.5
Sample C Male 35.6
Sample D Male 36.8
Ventral pallidum
nTPM: 35.4
Samples: 4

Max nTPM: 42.0
Min nTPM: 26.0
Sample A Female 38.5
Sample B Female 42.0
Sample C Male 26.0
Sample D Male 35.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 57.6
Samples: 4

Max nTPM: 63.8
Min nTPM: 53.0
Sample A Male 53.6
Sample B Male 53.0
Sample C Female 63.8
Sample D Female 60.0
Septum
nTPM: 70.9
Samples: 4

Max nTPM: 78.0
Min nTPM: 57.1
Sample A Male 57.1
Sample B Male 75.4
Sample C Female 78.0
Sample D Female 72.9
Ventral forebrain
nTPM: 61.8
Samples: 4

Max nTPM: 69.0
Min nTPM: 58.1
Sample A Male 69.0
Sample B Male 58.1
Sample C Female 60.9
Sample D Female 59.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.8
69059927 Antisense, RP_050317_04_E08, Mouse strain C57BL/6J (56 days, male) 1.8
Pallidum
Expression energy: 2.2
69059927 Antisense, RP_050317_04_E08, Mouse strain C57BL/6J (56 days, male) 2.2

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