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MYL12B
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:189.3 nTPM
HPA Brain:83.5 nTPM
GTEx:189.3 nTPM
FANTOM5:121.5 Scaled Tags Per Million
Pig:72.2 nTPM
Mouse:254.5 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.5
Sample id Sample description nTPM
Amygdala
nTPM: 83.5
2814 Male, age 76, right hemisphere 96.3
2514 Male, age 75, right hemisphere 86.7
2695 Female, age 67, right hemisphere 85.0
1987 Female, age 91, left hemisphere 81.6
2517 Female, age 94, left hemisphere 68.1
Basal amygdala
nTPM: 68.0
2110 Male, age 80, left hemisphere 77.5
1955 Male, age 76, both hemispheres 77.0
2609 Male, age 75, right hemisphere 69.4
2243 Female, age 91, right hemisphere 69.1
2685 Female, age 94, left hemisphere 61.5
2827 Female, age 67, right hemisphere 53.3
Central amygdala
nTPM: 75.2
1905 Male, age 76, both hemispheres 83.2
2826 Female, age 94, left hemisphere 77.2
2515 Male, age 75, right hemisphere 77.0
2239 Male, age 80, left hemisphere 76.0
2701 Female, age 91, right hemisphere 62.3
Corticomedial amygdala
nTPM: 72.7
2240 Male, age 76, both hemispheres 84.3
2829 Male, age 80, left hemisphere 80.2
2428 Male, age 75, right hemisphere 79.5
2429 Female, age 94, left hemisphere 70.7
2242 Female, age 91, right hemisphere 68.1
2535 Female, age 67, right hemisphere 53.1
Lateral amygdala
nTPM: 74.3
1883 Male, age 76, both hemispheres 91.9
2534 Female, age 94, left hemisphere 86.9
2516 Male, age 75, right hemisphere 85.9
2830 Female, age 67, right hemisphere 64.8
2256 Male, age 80, left hemisphere 61.6
2255 Female, age 91, right hemisphere 55.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

189.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 189.3
Samples: 152

Max nTPM: 451.3
Min nTPM: 110.2
Std nTPM: 59.1
Median nTPM: 177.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 451.3
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 425.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 385.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 383.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 350.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 349.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 320.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 310.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 284.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 283.1
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 282.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 280.5
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 279.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 276.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 264.1
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 252.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 242.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 239.4
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 233.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 232.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 231.8
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 230.9
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 230.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 227.8
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 226.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 222.8
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 221.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 221.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 220.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 220.0
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 219.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 218.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 216.7
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 216.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 215.2
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 214.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 214.3
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 214.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 213.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 213.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 213.3
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 212.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 212.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 210.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 206.6
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 205.7
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 205.0
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 203.9
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 203.6
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 202.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 201.1
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 200.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 199.6
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 196.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 195.9
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 194.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 191.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 190.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 190.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 189.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 188.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 188.3
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 186.2
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 186.1
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 185.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 184.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 183.9
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 181.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 180.5
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 180.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 180.2
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 180.0
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 179.7
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 179.3
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 179.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 178.0
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 176.5
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 176.5
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 176.2
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 175.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 175.9
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 175.2
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 175.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 174.4
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 173.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 173.1
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 171.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 171.1
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 170.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 170.3
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 169.6
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 168.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 168.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 167.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 166.4
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 166.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 165.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 165.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 164.9
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 163.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 162.4
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 160.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 159.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 158.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 154.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 154.0
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 154.0
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 153.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 152.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 152.0
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 151.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 150.3
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 148.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 148.4
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 147.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 146.8
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 145.2
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 144.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 144.2
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 143.7
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 142.8
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 141.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 141.6
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 141.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 141.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 140.9
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 140.6
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 138.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 137.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 136.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 136.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 136.2
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 134.8
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 134.4
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 133.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 131.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 131.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 131.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 129.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 128.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 127.9
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 125.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 122.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 122.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 121.5
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 120.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 118.9
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 117.7
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 115.2
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 112.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 112.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 110.2
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

121.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 121.5
FF:10151-102I7 76 years, female 121.5

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.2
Pig sample Sample description nTPM
Amygdala
nTPM: 72.2
Samples: 4

Max nTPM: 86.0
Min nTPM: 64.9
Sample A Female 86.0
Sample B Female 64.9
Sample C Male 69.5
Sample D Male 68.5

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

254.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 254.6
Samples: 4

Max nTPM: 276.7
Min nTPM: 235.3
Sample A Male 237.2
Sample B Male 235.3
Sample C Female 276.7
Sample D Female 269.0

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
70784672 Antisense, RP_050706_01_B05, Mouse strain C57BL/6J (56 days, male) 0.2

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