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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:110.0 nTPM
HPA Brain:183.1 nTPM
GTEx:110.0 nTPM
FANTOM5:136.3 Scaled Tags Per Million
Pig:65.8 nTPM
Mouse:178.9 nTPM
Allen mouse:9.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005695Antibody CAB022068Antibody CAB035999Antibody CAB080052Antibody CAB080054Antibody CAB080098
Glial cells LowNot detectedMediumLowNot detectedNot detected
Neuronal cells HighNot detectedHighHighNot detectedMedium











BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 151.1
1781 Male, age 74, unknown 186.4
1854 Male, age 80, left hemisphere 157.0
2290 Female, age 72, unknown 156.7
1857 Female, age 85, left hemisphere 154.1
2846 Female, age 79, unknown 152.0
2481 Female, age 94, left hemisphere 148.2
2289 Male, age 61, right hemisphere 143.1
2288 Male, age 75, left hemisphere 111.0
Globus pallidus, externus
nTPM: 160.1
2646 Male, age 61, right hemisphere 182.6
2567 Female, age 72, unknown 167.9
2772 Female, age 79, unknown 157.4
2395 Male, age 75, both hemispheres 150.9
1996 Male, age 80, right hemisphere 141.5
Globus pallidus, internus
nTPM: 140.8
2566 Female, age 72, unknown 155.4
2483 Female, age 94, right hemisphere 153.8
2037 Male, age 80, right hemisphere 144.4
1818 Male, age 74, unknown 139.6
2778 Female, age 91, both hemispheres 133.2
2287 Male, age 75, right hemisphere 129.7
2111 Female, age 85, right hemisphere 129.6
Nucleus accumbens
nTPM: 142.1
1783 Male, age 74, unknown 166.4
1856 Female, age 91, right hemisphere 166.3
1806 Female, age 85, left hemisphere 153.4
2732 Male, age 80, right hemisphere 135.2
2391 Female, age 94, left hemisphere 133.7
2698 Female, age 72, unknown 132.9
2824 Male, age 61, right hemisphere 127.9
2286 Male, age 75, left hemisphere 121.1
Nucleus basalis of Meynert
nTPM: 158.2
2569 Male, age 61, both hemispheres 184.0
2484 Female, age 94, left hemisphere 163.6
2393 Male, age 80, right hemisphere 150.9
2821 Male, age 75, both hemispheres 134.4
Nucleus of the diagonal band
nTPM: 183.1
2195 Female, age 85, both hemispheres 201.4
2775 Male, age 80, right hemisphere 200.7
1812 Female, age 91, both hemispheres 197.3
2029 Male, age 61, right hemisphere 177.7
1979 Male, age 74, unknown 138.3
Putamen
nTPM: 152.7
2647 Male, age 75, left hemisphere 177.8
2466 Female, age 79, unknown 160.6
1838 Male, age 80, right hemisphere 151.8
1829 Male, age 74, unknown 148.7
2489 Female, age 72, unknown 148.3
1937 Female, age 91, right hemisphere 143.7
2482 Female, age 94, left hemisphere 138.0
Septal nuclei
nTPM: 179.6
2031 Female, age 72, unknown 220.7
1960 Male, age 74, unknown 209.2
2059 Female, age 85, both hemispheres 182.8
2009 Female, age 91, both hemispheres 181.8
2394 Male, age 61, left hemisphere 165.0
2629 Female, age 94, right hemisphere 156.8
2199 Male, age 80, right hemisphere 140.7
Stria terminalis, bed nucleus
nTPM: 174.1
1974 Female, age 91, both hemispheres 192.0
2486 Female, age 94, both hemispheres 172.3
2201 Male, age 74, unknown 158.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 101.4
Samples: 246

Max nTPM: 201.1
Min nTPM: 57.2
Std nTPM: 21.1
Median nTPM: 99.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 201.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 184.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 179.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 167.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 154.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 151.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 150.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 149.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 142.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 142.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 138.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 135.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 133.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 132.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 131.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 130.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 130.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 129.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 128.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 127.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 126.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 124.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 123.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 123.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 123.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 123.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 122.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 121.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 121.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 121.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 121.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 120.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 120.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 120.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 120.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 119.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 119.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 119.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 119.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 118.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 118.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 118.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 118.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 118.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 118.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 117.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 117.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 117.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 117.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 117.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 116.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 116.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 116.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 115.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 115.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 115.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 114.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 113.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 113.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 113.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 113.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 113.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 113.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 112.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 111.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 111.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 110.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 110.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 110.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 110.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 110.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 109.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 108.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 108.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 108.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 107.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 107.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 107.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 106.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 106.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 106.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 106.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 106.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 106.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 105.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 105.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 105.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 104.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 104.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 104.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 103.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 103.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 103.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 103.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 102.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 102.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 102.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 102.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 102.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 102.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 102.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 101.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 101.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 101.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 100.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 100.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 100.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 100.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 100.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 99.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 99.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 99.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 99.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 99.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 98.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 98.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 98.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 98.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 98.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 98.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 97.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 97.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 97.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 97.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 97.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 96.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 96.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 96.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 94.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 94.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 94.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 94.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 94.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 93.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 93.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 93.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 93.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 93.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 93.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 93.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 92.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 92.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 92.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 92.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 92.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 91.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 91.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 91.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 91.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 91.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 91.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 91.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 91.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 90.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 90.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 90.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 90.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 89.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 89.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 89.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 89.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 89.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 88.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 88.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 88.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 88.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 88.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 88.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 87.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 87.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 87.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 87.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 86.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 86.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 86.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 85.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 85.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 84.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 84.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 84.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 84.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 83.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 83.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 83.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 83.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 82.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 81.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 80.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 80.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 80.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 80.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 80.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 80.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 79.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 79.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 79.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 78.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 78.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 78.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 78.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 76.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 76.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 75.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 75.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 75.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 75.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 72.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 71.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 68.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 67.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 65.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 65.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 63.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 62.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 58.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 110.0
Samples: 246

Max nTPM: 197.2
Min nTPM: 38.2
Std nTPM: 23.5
Median nTPM: 107.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 197.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 181.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 178.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 170.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 166.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 163.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 163.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 162.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 159.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 158.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 158.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 156.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 153.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 152.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 150.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 147.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 146.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 144.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 144.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 144.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 144.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 141.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 141.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 140.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 140.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 140.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 140.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 139.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 138.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 138.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 137.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 137.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 135.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 134.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 133.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 133.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 133.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 133.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 131.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 131.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 131.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 130.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 130.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 130.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 129.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 129.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 129.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 128.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 128.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 128.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 128.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 126.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 126.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 126.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 126.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 126.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 125.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 124.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 124.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 124.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 124.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 123.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 122.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 121.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 120.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 120.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 119.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 119.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 119.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 119.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 119.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 118.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 118.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 118.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 118.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 118.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 118.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 118.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 118.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 117.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 117.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 117.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 117.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 117.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 117.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 116.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 116.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 115.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 115.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 115.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 115.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 115.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 115.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 115.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 114.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 114.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 114.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 114.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 114.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 113.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 113.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 112.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 112.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 112.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 112.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 112.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 112.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 111.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 111.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 110.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 110.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 110.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 110.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 109.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 109.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 109.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 109.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 109.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 109.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 108.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 107.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 107.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 107.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 107.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 107.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 107.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 106.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 106.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 106.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 106.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 105.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 105.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 105.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 105.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 104.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 104.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 104.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 103.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 103.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 103.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 103.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 103.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 102.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 102.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 102.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 102.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 102.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 102.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 102.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 101.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 101.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 101.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 101.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 101.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 100.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 100.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 100.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 99.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 99.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 99.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 99.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 99.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 99.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 99.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 98.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 98.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 98.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 97.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 97.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 97.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 97.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 96.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 96.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 96.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 96.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 96.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 96.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 96.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 95.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 95.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 95.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 95.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 94.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 94.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 94.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 94.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 93.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 93.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 93.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 92.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 92.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 92.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 92.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 92.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 91.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 91.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 91.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 91.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 91.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 91.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 91.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 91.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 90.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 90.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 89.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 89.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 88.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 88.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 88.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 88.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 88.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 88.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 87.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 87.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 87.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 86.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 86.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 86.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 85.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 85.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 85.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 85.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 85.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 84.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 84.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 82.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 81.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 81.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 80.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 80.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 80.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 77.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 74.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 73.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 73.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 68.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 68.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 67.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 66.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 62.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 62.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 61.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 61.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 54.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 38.2
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Brain - Putamen (basal ganglia)
Average nTPM: 107.8
Samples: 205

Max nTPM: 163.6
Min nTPM: 64.6
Std nTPM: 19.6
Median nTPM: 105.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 163.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 163.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 159.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 158.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 155.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 151.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 150.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 150.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 147.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 147.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 146.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 141.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 139.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 138.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 137.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 136.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 134.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 134.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 133.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 133.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 133.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 133.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 132.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 132.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 131.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 130.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 130.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 129.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 129.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 128.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 128.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 127.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 127.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 127.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 125.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 124.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 124.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 124.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 123.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 123.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 123.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 123.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 123.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 123.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 122.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 122.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 122.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 122.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 122.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 122.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 122.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 121.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 121.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 120.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 119.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 119.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 119.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 118.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 118.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 118.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 118.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 117.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 117.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 116.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 116.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 115.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 115.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 115.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 115.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 115.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 115.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 115.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 114.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 113.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 113.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 113.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 112.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 112.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 112.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 111.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 110.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 110.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 110.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 110.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 109.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 109.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 109.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 109.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 108.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 108.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 108.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 108.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 108.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 107.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 107.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 107.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 106.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 106.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 106.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 105.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 105.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 105.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 105.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 105.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 105.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 105.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 105.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 104.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 104.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 104.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 104.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 103.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 102.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 102.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 102.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 102.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 102.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 101.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 101.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 101.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 100.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 100.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 100.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 100.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 100.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 100.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 100.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 100.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 100.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 99.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 99.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 99.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 99.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 98.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 98.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 98.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 97.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 97.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 96.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 96.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 96.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 96.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 96.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 95.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 95.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 94.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 94.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 94.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 94.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 94.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 94.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 93.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 93.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 93.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 93.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 93.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 92.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 92.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 92.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 92.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 92.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 91.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 91.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 90.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 89.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 89.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 89.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 89.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 88.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 88.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 88.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 88.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 88.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 87.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 86.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 86.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 86.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 85.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 85.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 85.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 85.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 84.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 84.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 84.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 83.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 82.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 81.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 79.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 79.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 78.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 77.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 77.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 73.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 71.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 69.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 69.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 66.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 64.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

136.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 76.9
FF:10164-103B2 76 years, female 76.9
Nucleus accumbens
Scaled Tags Per Million: 136.3
FF:10037-101F1 23-56 years, mixed 136.3
Putamen
Scaled Tags Per Million: 98.3
FF:10176-103C5 60 years, female 98.3
Globus pallidus
Scaled Tags Per Million: 67.5
FF:10175-103C4 60 years, female 80.0
FF:10161-103A8 76 years, female 55.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.8
Pig sample Sample description nTPM
Caudate
nTPM: 62.1
Samples: 4

Max nTPM: 68.8
Min nTPM: 54.1
Sample A Female 54.1
Sample B Female 68.8
Sample C Male 67.6
Sample D Male 57.8
Putamen
nTPM: 65.7
Samples: 4

Max nTPM: 78.7
Min nTPM: 57.9
Sample A Female 58.3
Sample B Female 57.9
Sample C Male 78.7
Sample D Male 68.0
Septum
nTPM: 61.4
Samples: 4

Max nTPM: 67.0
Min nTPM: 56.2
Sample A Female 63.9
Sample B Female 56.2
Sample C Male 67.0
Sample D Male 58.6
Ventral pallidum
nTPM: 61.1
Samples: 4

Max nTPM: 71.8
Min nTPM: 48.9
Sample A Female 48.9
Sample B Female 69.7
Sample C Male 71.8
Sample D Male 53.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 136.1
Samples: 4

Max nTPM: 146.0
Min nTPM: 127.7
Sample A Male 127.7
Sample B Male 139.2
Sample C Female 131.6
Sample D Female 146.0
Septum
nTPM: 178.9
Samples: 4

Max nTPM: 204.8
Min nTPM: 162.2
Sample A Male 164.8
Sample B Male 204.8
Sample C Female 183.7
Sample D Female 162.2
Ventral forebrain
nTPM: 144.0
Samples: 4

Max nTPM: 162.2
Min nTPM: 132.6
Sample A Male 132.6
Sample B Male 143.0
Sample C Female 162.2
Sample D Female 138.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.7
68668048 Antisense, RP_050203_01_C11, Mouse strain C57BL/6J (56 days, male) 7.7
Pallidum
Expression energy: 9.5
68668048 Antisense, RP_050203_01_C11, Mouse strain C57BL/6J (56 days, male) 9.5

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