We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PTK2B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PTK2B
TISSUE PRIMARY DATA CEREBELLUM Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Cerebellum
Tissue proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Low
Purkinje cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:142.7 nTPM
HPA Brain:101.2 nTPM
GTEx:142.7 nTPM
FANTOM5:179.8 Scaled Tags Per Million
Pig:4.8 nTPM
Mouse:2.1 nTPM
Allen mouse:1.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026091Antibody HPA026276Antibody CAB003850
Purkinje cells MediumMediumNot detected
Cells in granular layer MediumNot detectedNot detected
Cells in molecular layer LowLowNot detected







CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 95.0
1788 Male, age 55, unknown 141.0
2101 Male, age 74, right hemisphere 139.6
1768 Female, age 72, unknown 123.2
2055 Female, age 91, right hemisphere 83.1
1774 Male, age 80, left hemisphere 82.9
1769 Male, age 76, right hemisphere 69.9
2006 Male, age 61, right hemisphere 66.2
2003 Female, age 85, right hemisphere 53.6
Cerebellar nuclei
nTPM: 21.8
2318 Male, age 74, left hemisphere 53.3
2882 Male, age 76, left hemisphere 22.1
2783 Female, age 72, unknown 19.7
1879 Male, age 55, unknown 19.0
1871 Male, age 74, unknown 18.5
1966 Female, age 91, left hemisphere 17.1
2005 Male, age 80, left hemisphere 17.0
2175 Male, age 61, right hemisphere 15.3
2177 Female, age 85, both hemispheres 14.6
Flocculonodular lobe
nTPM: 94.7
1792 Male, age 74, unknown 135.9
1771 Male, age 80, left hemisphere 111.4
1765 Male, age 55, unknown 111.3
1835 Female, age 85, right hemisphere 82.4
2176 Female, age 91, right hemisphere 82.0
2004 Male, age 61, right hemisphere 71.6
1767 Male, age 76, left hemisphere 68.1
Vermis
nTPM: 101.2
1825 Male, age 74, unknown 132.5
1766 Male, age 55, unknown 130.6
1751 Male, age 74, right hemisphere 119.5
1928 Female, age 72, unknown 112.5
1988 Female, age 85, left hemisphere 103.8
2834 Male, age 80, left hemisphere 92.7
1778 Female, age 91, left hemisphere 80.9
1770 Male, age 76, left hemisphere 74.2
2460 Male, age 61, both hemispheres 63.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.7
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 142.7
Samples: 215

Max nTPM: 230.7
Min nTPM: 65.6
Std nTPM: 34.0
Median nTPM: 146.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 230.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 227.2
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 217.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 211.4
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 209.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 207.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 201.4
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 200.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 200.1
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 196.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 194.6
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 194.0
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 193.6
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 193.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 192.7
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 190.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 188.7
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 188.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 186.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 184.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 182.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 181.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 181.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 181.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 181.8
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 181.5
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 180.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 180.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 180.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 179.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 178.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 177.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 176.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 176.5
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 175.8
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 174.9
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 174.3
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 174.3
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 174.0
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 172.3
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 172.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 171.9
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 171.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 171.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 171.2
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 169.3
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 169.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 169.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 168.4
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 167.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 167.4
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 166.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 166.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 166.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 166.2
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 166.1
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 165.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 165.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 165.1
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 164.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 163.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 163.6
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 163.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 163.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 163.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 162.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 161.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 161.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 161.5
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 161.0
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 160.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 159.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 158.9
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 158.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 157.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 157.1
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 156.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 156.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 156.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 156.0
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 155.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 155.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 154.7
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 154.0
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 153.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 153.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 153.1
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 152.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 152.5
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 152.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 151.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 151.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 150.6
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 150.4
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 150.3
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 150.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 149.8
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 149.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 149.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 149.0
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 148.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 147.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 147.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 147.2
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 146.8
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 146.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 146.3
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 146.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 145.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 145.4
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 144.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 144.5
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 144.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 144.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 144.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 143.9
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 143.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 142.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 141.9
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 140.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 140.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 139.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 138.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 138.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 137.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 136.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 136.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 136.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 135.9
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 135.1
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 135.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 134.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 133.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 133.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 133.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 133.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 132.1
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 131.7
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 131.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 130.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 130.5
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 130.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 129.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 129.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 129.1
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 128.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 128.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 127.1
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 126.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 126.6
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 126.5
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 126.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 126.0
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 125.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 124.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 124.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 123.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 123.4
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 123.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 121.9
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 121.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 121.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 120.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 120.3
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 117.2
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 116.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 115.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 114.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 113.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 112.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 111.3
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 110.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 110.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 110.2
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 110.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 109.2
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 107.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 107.3
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 105.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 105.5
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 104.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 102.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 102.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 101.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 99.8
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 99.2
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 99.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 97.3
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 97.1
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 96.2
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 95.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 94.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 94.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 93.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 93.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 93.1
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 92.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 91.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 90.7
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 90.3
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 88.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 87.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 87.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 85.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 85.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 80.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 77.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 77.6
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 77.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 75.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 72.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 69.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 67.1
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 66.7
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 65.6
Show allShow less
Brain - Cerebellum
Average nTPM: 138.2
Samples: 241

Max nTPM: 253.4
Min nTPM: 61.0
Std nTPM: 33.9
Median nTPM: 140.0
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 253.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 225.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 221.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 217.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 206.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 202.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 198.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 198.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 198.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 198.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 195.9
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 195.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 195.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 191.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 188.4
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 186.3
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 185.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 185.7
GTEX-12126-0926-SM-5FQTW 20-29 years, male 184.7
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 184.1
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 184.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 184.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 184.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 183.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 183.2
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 183.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 182.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 179.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 178.9
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 178.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 177.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 176.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 176.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 175.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 175.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 175.3
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 175.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 173.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 172.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 172.1
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 172.0
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 170.0
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 168.8
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 168.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 168.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 168.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 168.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 167.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 167.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 166.8
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 165.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 165.7
GTEX-17EVP-2926-SM-793BU 40-49 years, male 165.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 164.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 164.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 163.9
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 163.7
GTEX-11DYG-2926-SM-5H132 60-69 years, male 163.2
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 162.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 161.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 160.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 160.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 160.1
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 159.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 158.1
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 157.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 157.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 155.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 155.1
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 154.9
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 154.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 154.0
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 153.7
GTEX-14ABY-3026-SM-664NE 50-59 years, male 153.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 153.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 153.4
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 153.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 152.9
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 152.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 152.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 152.2
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 151.8
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 151.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 151.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 151.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 150.6
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 150.6
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 149.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 149.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 149.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 149.3
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 149.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 148.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 148.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 148.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 148.5
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 148.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 148.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 147.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 146.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 145.9
GTEX-RU72-2926-SM-2TF66 50-59 years, female 145.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 145.7
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 145.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 145.3
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 145.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 145.1
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 145.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 145.0
GTEX-1B933-3026-SM-731DB 50-59 years, female 144.5
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 144.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 143.9
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 143.6
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 143.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 143.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 142.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 142.2
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 141.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 140.9
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 140.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 140.0
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 139.7
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 139.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 139.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 139.2
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 139.1
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 138.9
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 138.8
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 138.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 138.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 137.4
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 137.4
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 136.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 135.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 134.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 133.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 133.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 132.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 132.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 131.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 131.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 130.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 130.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 129.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 129.5
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 129.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 128.9
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 128.5
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 128.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 128.2
GTEX-144GL-2926-SM-5O99F 50-59 years, male 127.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 127.4
GTEX-17HII-2926-SM-79OMK 50-59 years, male 125.7
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 125.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 124.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 124.8
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 122.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 122.0
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 122.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 121.2
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 121.1
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 120.8
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 120.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 118.2
GTEX-18465-2926-SM-7KFSE 50-59 years, male 117.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 117.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 117.0
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 116.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 116.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 116.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 116.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 116.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 116.1
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 116.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 115.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 115.6
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 115.3
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 114.8
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 114.7
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 113.9
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 112.4
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 112.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 111.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 110.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 110.6
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 109.7
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 109.7
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 109.3
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 108.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 108.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 108.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 107.3
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 106.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 106.8
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 106.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 106.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 104.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 104.0
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 103.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 103.5
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 103.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 102.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 102.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 101.4
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 100.7
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 99.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 99.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 99.4
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 99.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 99.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 98.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 98.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 98.4
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 95.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 94.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 93.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 93.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 93.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 93.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 92.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 92.6
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 91.5
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 90.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 86.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 85.5
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 85.1
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 85.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 84.1
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 83.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 82.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 81.3
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 80.3
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 79.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 79.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 78.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 76.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 71.4
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 71.1
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 70.7
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 61.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 61.0
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

179.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 179.8
FF:10083-102B2 22-68 years, mixed 195.6
FF:10166-103B4 76 years, female 164.1

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 4.9
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.8
Sample A Female 4.9
Sample B Female 5.9
Sample C Male 3.8
Sample D Male 4.8

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 2.1
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.8
Sample A Male 2.0
Sample B Male 1.8
Sample C Female 2.8
Sample D Female 1.9

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 1.1
71920502 Antisense, RP_050915_02_B10, Mouse strain C57BL/6J (56 days, male) 1.1
74357569 Antisense, RP_050915_02_B10, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org