PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:315.8 nTPM
FANTOM5:78.4 Scaled Tags Per Million
Pig:191.6 nTPM
Mouse:166.1 nTPM
Allen mouse:7.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 315.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 247.7
2301 Female, age 85, both hemispheres 297.3
2188 Female, age 91, both hemispheres 255.7
2090 Male, age 80, both hemispheres 227.7
1984 Male, age 76, both hemispheres 210.0
Area postrema
nTPM: 206.3
2306 Male, age 80, both hemispheres 245.4
2054 Male, age 76, both hemispheres 207.8
2799 Male, age 61, both hemispheres 165.9
Dorsal cochlear nucleus
nTPM: 235.7
2187 Female, age 91, both hemispheres 288.7
2802 Male, age 74, right hemisphere 240.4
2058 Male, age 76, both hemispheres 227.2
2378 Male, age 80, both hemispheres 219.6
2370 Male, age 61, both hemispheres 202.7
Dorsal medullary reticular nucleus
nTPM: 262.8
2088 Male, age 76, both hemispheres 281.0
2040 Female, age 85, both hemispheres 272.4
2373 Male, age 61, both hemispheres 235.2
Dorsal motor vagal complex
nTPM: 235.3
2185 Male, age 76, both hemispheres 276.4
2643 Male, age 74, both hemispheres 255.8
2133 Female, age 91, both hemispheres 255.5
2844 Male, age 55, unknown 250.5
2000 Male, age 74, unknown 238.9
2813 Female, age 72, unknown 225.4
2807 Female, age 85, both hemispheres 196.9
2797 Male, age 61, both hemispheres 182.9
Dorsal tegmental nucleus
nTPM: 244.7
2358 Male, age 61, both hemispheres 272.9
2083 Male, age 80, both hemispheres 261.3
2326 Male, age 74, both hemispheres 232.2
1936 Male, age 76, left hemisphere 212.3
Dorsolateral tegmental area
nTPM: 226.1
2751 Female, age 85, both hemispheres 265.0
2337 Male, age 61, both hemispheres 259.3
2654 Male, age 80, both hemispheres 241.7
2141 Male, age 76, both hemispheres 191.9
2360 Male, age 74, both hemispheres 172.5
Gigantocellular reticular nuclei, medullary
nTPM: 231.2
2314 Male, age 61, both hemispheres 290.4
2387 Female, age 91, both hemispheres 247.4
1876 Female, age 85, both hemispheres 228.3
2310 Male, age 80, both hemispheres 220.8
2022 Male, age 76, right hemisphere 209.0
2462 Male, age 74, both hemispheres 191.0
Gigantocellular reticular nuclei, pars
nTPM: 230.8
2336 Male, age 61, both hemispheres 276.2
2084 Female, age 85, both hemispheres 249.2
2168 Male, age 76, both hemispheres 226.0
2330 Male, age 80, both hemispheres 202.3
2706 Male, age 80, both hemispheres 200.2
Inferior olive
nTPM: 244.2
2628 Female, age 91, both hemispheres 267.9
2085 Female, age 85, both hemispheres 261.5
2178 Male, age 61, both hemispheres 241.5
2563 Male, age 74, both hemispheres 237.0
2379 Male, age 80, both hemispheres 212.9
Kolliker-Fuse nucleus
nTPM: 216.4
2793 Female, age 91, left hemisphere 272.1
2163 Male, age 80, both hemispheres 231.5
2315 Male, age 76, right hemisphere 145.6
Lateral lemniscal nuclei
nTPM: 219.7
2320 Female, age 91, left hemisphere 245.3
2169 Male, age 76, both hemispheres 236.8
2453 Male, age 74, right hemisphere 210.0
2746 Female, age 85, left hemisphere 203.4
2036 Male, age 80, both hemispheres 203.0
Lateral medullary reticular nucleus
nTPM: 288.4
2852 Male, age 80, both hemispheres 328.4
2804 Female, age 91, both hemispheres 294.5
2305 Male, age 74, both hemispheres 287.8
2190 Female, age 85, both hemispheres 285.5
2374 Male, age 61, both hemispheres 268.4
2044 Male, age 76, both hemispheres 265.6
Lateral parabrachial nucleus
nTPM: 252.2
2790 Male, age 61, both hemispheres 357.8
2792 Male, age 76, both hemispheres 241.6
2013 Male, age 80, both hemispheres 216.8
2139 Female, age 85, right hemisphere 192.6
Lateral vestibular nucleus
nTPM: 288.9
2311 Male, age 80, both hemispheres 302.3
2184 Male, age 76, both hemispheres 275.5
Locus coeruleus
nTPM: 258.9
2720 Male, age 74, both hemispheres 306.4
2162 Male, age 80, both hemispheres 281.2
2123 Female, age 91, both hemispheres 276.1
2317 Female, age 72, unknown 258.3
1980 Male, age 76, both hemispheres 254.5
2014 Male, age 55, unknown 253.8
2788 Male, age 74, unknown 181.7
Medial olivary nucleus
nTPM: 249.7
1962 Male, age 76, both hemispheres 295.5
1943 Male, age 61, both hemispheres 247.1
2851 Male, age 80, both hemispheres 244.8
2138 Female, age 91, both hemispheres 211.4
Medial parabrachial nucleus
nTPM: 289.1
2170 Female, age 91, both hemispheres 354.7
2156 Male, age 61, both hemispheres 341.6
2463 Female, age 85, right hemisphere 261.4
2786 Male, age 76, both hemispheres 255.3
2854 Male, age 80, both hemispheres 232.2
Medial periolivary nuclei
nTPM: 208.7
2458 Female, age 91, both hemispheres 223.5
2063 Male, age 76, both hemispheres 218.5
2081 Male, age 80, both hemispheres 203.3
2791 Male, age 74, right hemisphere 200.0
2171 Female, age 85, both hemispheres 198.5
Medial vestibular nucleus
nTPM: 260.9
2801 Male, age 74, both hemispheres 337.9
2624 Male, age 61, both hemispheres 265.9
2803 Female, age 91, both hemispheres 257.7
2093 Male, age 80, both hemispheres 248.3
2743 Female, age 85, both hemispheres 232.1
2134 Male, age 76, both hemispheres 223.5
Motor facial nucleus
nTPM: 223.5
2126 Male, age 61, both hemispheres 253.8
2365 Male, age 74, right hemisphere 227.4
2062 Male, age 76, both hemispheres 226.0
2697 Female, age 85, both hemispheres 224.2
2795 Female, age 91, both hemispheres 216.0
2327 Male, age 80, both hemispheres 193.5
Motor hypoglossal nucleus
nTPM: 282.6
2182 Male, age 80, both hemispheres 356.9
2125 Female, age 91, both hemispheres 317.6
2132 Female, age 85, both hemispheres 281.2
2461 Male, age 61, both hemispheres 239.6
2277 Male, age 76, both hemispheres 217.6
Motor trigeminal nucleus
nTPM: 230.5
2321 Female, age 91, both hemispheres 260.7
2560 Male, age 74, both hemispheres 250.7
2335 Male, age 61, both hemispheres 235.7
2309 Male, age 76, both hemispheres 230.6
2079 Male, age 80, both hemispheres 174.8
Nuclei of the trapezoid body
nTPM: 212.2
2166 Male, age 80, both hemispheres 230.2
2159 Male, age 61, both hemispheres 216.6
2368 Female, age 91, both hemispheres 215.2
1983 Male, age 76, both hemispheres 211.1
2735 Female, age 85, both hemispheres 187.8
Nucleus ambiguus
nTPM: 315.6
2096 Female, age 85, both hemispheres 323.6
2071 Male, age 76, both hemispheres 307.6
Nucleus cuneatus
nTPM: 272.3
2100 Male, age 76, both hemispheres 308.1
2380 Male, age 80, both hemispheres 301.8
2131 Male, age 76, both hemispheres 296.0
2381 Male, age 80, both hemispheres 291.8
2808 Female, age 85, both hemispheres 286.5
2564 Male, age 74, both hemispheres 280.5
2805 Female, age 91, both hemispheres 231.8
2376 Male, age 61, both hemispheres 227.9
2562 Male, age 61, both hemispheres 226.4
Nucleus gracilis
nTPM: 280.2
2382 Male, age 80, both hemispheres 323.0
2627 Male, age 74, both hemispheres 269.5
2299 Female, age 85, both hemispheres 248.0
Nucleus raphe magnus
nTPM: 215.5
2051 Male, age 76, both hemispheres 241.9
2455 Male, age 74, both hemispheres 218.2
2328 Male, age 80, both hemispheres 217.3
2459 Female, age 91, both hemispheres 215.4
2160 Male, age 61, both hemispheres 207.2
2172 Female, age 85, both hemispheres 193.2
Nucleus raphe obscurus
nTPM: 314.2
2845 Female, age 85, midline 337.0
2142 Male, age 76, midline 323.0
2800 Male, age 61, midline 282.5
Nucleus raphe pallidus
nTPM: 315.8
2145 Male, age 76, midline 325.1
2183 Male, age 80, midline 322.5
1924 Male, age 61, midline 299.9
Nucleus tractus solitarii
nTPM: 182.5
2656 Male, age 76, both hemispheres 225.4
2307 Male, age 80, both hemispheres 211.7
2191 Female, age 85, both hemispheres 188.3
2144 Female, age 91, right hemisphere 104.7
Paramedian reticular nucleus
nTPM: 239.3
2313 Male, age 61, both hemispheres 262.2
2057 Male, age 80, both hemispheres 256.8
2050 Female, age 85, both hemispheres 225.8
2052 Male, age 76, both hemispheres 212.6
Parvicellular reticular nuclei
nTPM: 235.1
2119 Male, age 80, both hemispheres 253.6
2095 Male, age 76, both hemispheres 244.6
2558 Male, age 74, both hemispheres 207.1
Parvicellular reticular nuclei, medullary
nTPM: 238.8
2189 Female, age 91, both hemispheres 255.2
2091 Female, age 85, both hemispheres 241.6
2181 Male, age 80, left hemisphere 219.7
Pedunculopontine tegmental nucleus
nTPM: 242.4
2334 Male, age 80, both hemispheres 253.4
2338 Male, age 61, both hemispheres 246.5
1921 Female, age 85, both hemispheres 227.2
Peritrigeminal nucleus
nTPM: 275.3
2067 Female, age 85, both hemispheres 305.3
2179 Male, age 61, both hemispheres 267.1
2136 Male, age 76, both hemispheres 253.3
Pontine nuclei
nTPM: 228.0
2454 Male, age 74, left hemisphere 257.4
1968 Male, age 76, left hemisphere 247.9
2109 Female, age 72, unknown 243.0
2319 Female, age 91, both hemispheres 241.7
1863 Male, age 55, unknown 231.4
2787 Female, age 85, both hemispheres 228.4
2115 Male, age 80, left hemisphere 197.7
2727 Male, age 61, right hemisphere 176.8
Pontine raphe nucleus
nTPM: 210.7
2853 Male, age 76, midline 228.4
2122 Female, age 85, midline 193.0
Posteroventral cochlear nucleus
nTPM: 234.6
2070 Male, age 76, both hemispheres 271.0
2341 Male, age 80, both hemispheres 247.3
2135 Female, age 91, both hemispheres 230.1
2371 Male, age 61, both hemispheres 228.3
2752 Female, age 85, both hemispheres 196.5
Prepositus hypoglossal nucleus
nTPM: 262.0
2855 Female, age 85, right hemisphere 311.3
2086 Male, age 80, both hemispheres 212.7
Principal sensory trigeminal nucleus
nTPM: 224.4
2324 Male, age 76, both hemispheres 248.4
2367 Female, age 91, left hemisphere 243.1
2158 Male, age 61, both hemispheres 231.8
2008 Male, age 80, left hemisphere 174.3
Reticular pontine nucleus, caudal
nTPM: 239.8
2559 Male, age 74, both hemispheres 280.1
2457 Female, age 91, both hemispheres 252.0
2092 Male, age 76, both hemispheres 230.5
2332 Male, age 80, right hemisphere 196.5
Reticular pontine nucleus, oral
nTPM: 245.1
2167 Male, age 76, both hemispheres 262.0
2361 Male, age 74, both hemispheres 254.8
1939 Male, age 80, both hemispheres 253.1
2366 Female, age 91, both hemispheres 239.8
2012 Female, age 85, both hemispheres 215.6
Reticulotegmental nucleus
nTPM: 227.7
2322 Female, age 91, both hemispheres 255.6
2452 Male, age 74, both hemispheres 247.0
2333 Male, age 80, both hemispheres 208.2
2325 Male, age 76, both hemispheres 200.1
Spinal trigeminal nucleus, caudal
nTPM: 277.5
2447 Male, age 76, both hemispheres 309.1
2308 Male, age 80, both hemispheres 292.6
2390 Female, age 91, both hemispheres 266.2
2642 Male, age 74, both hemispheres 264.7
2312 Male, age 61, both hemispheres 254.9
Spinal trigeminal nucleus, interpolar
nTPM: 229.2
2625 Male, age 61, both hemispheres 245.6
2033 Male, age 80, both hemispheres 242.4
2386 Female, age 85, both hemispheres 224.0
2066 Male, age 76, right hemisphere 221.0
2389 Female, age 91, both hemispheres 213.0
Spinal trigeminal nucleus, oral
nTPM: 229.6
2164 Male, age 80, both hemispheres 253.3
1978 Male, age 76, both hemispheres 240.3
2737 Female, age 85, both hemispheres 195.2
Spinal vestibular nucleus
nTPM: 258.1
2748 Male, age 76, both hemispheres 295.3
2384 Male, age 74, both hemispheres 284.5
2186 Female, age 91, both hemispheres 257.1
2806 Female, age 85, both hemispheres 256.5
2780 Male, age 80, both hemispheres 249.0
2796 Male, age 61, both hemispheres 206.3
Subcoeruleus area
nTPM: 234.5
2369 Female, age 85, left hemisphere 267.1
2451 Male, age 74, both hemispheres 239.3
2323 Female, age 91, left hemisphere 233.8
2089 Male, age 76, left hemisphere 223.2
1958 Male, age 80, both hemispheres 209.0
Superior olive
nTPM: 221.0
2020 Male, age 76, both hemispheres 235.8
2329 Male, age 80, right hemisphere 227.5
2364 Male, age 74, right hemisphere 224.6
2561 Female, age 91, both hemispheres 222.4
1875 Female, age 85, both hemispheres 194.8
Superior vestibular nucleus
nTPM: 216.8
2015 Male, age 80, both hemispheres 245.8
2061 Male, age 76, both hemispheres 231.7
2383 Male, age 74, both hemispheres 173.0
Ventral medullary reticular nucleus
nTPM: 280.0
2060 Male, age 76, both hemispheres 310.4
2372 Male, age 61, both hemispheres 249.6
Ventral periolivary nuclei
nTPM: 201.4
2165 Male, age 80, both hemispheres 217.6
2023 Male, age 76, both hemispheres 217.4
2130 Female, age 85, both hemispheres 195.0
2794 Female, age 91, left hemisphere 175.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 260.2
2741 Female, age 85, both hemispheres 276.7
2180 Male, age 61, both hemispheres 270.6
2118 Male, age 80, both hemispheres 265.7
1986 Male, age 76, both hemispheres 250.8
2302 Female, age 91, both hemispheres 237.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 236.6
2359 Male, age 61, both hemispheres 304.0
2456 Female, age 91, both hemispheres 238.7
1959 Male, age 76, both hemispheres 229.3
2840 Female, age 85, both hemispheres 225.1
2449 Male, age 74, both hemispheres 213.9
2161 Male, age 80, both hemispheres 208.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 78.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 56.5
FF:10182-103D2 60 years, female 58.7
FF:10165-103B3 76 years, female 54.3
Medulla oblongata
Scaled Tags Per Million: 35.4
FF:10038-101F2 18-64 years, mixed 58.2
FF:10155-103A2 76 years, female 25.3
FF:10174-103C3 60 years, female 22.9
Pons
Scaled Tags Per Million: 78.4
FF:10033-101E6 18-54 years, mixed 78.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 191.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 191.6
Samples: 4

Max nTPM: 206.7
Min nTPM: 164.8
Sample A Female 195.0
Sample B Female 164.8
Sample C Male 206.7
Sample D Male 200.0
Pons
nTPM: 167.5
Samples: 4

Max nTPM: 190.8
Min nTPM: 131.0
Sample A Female 188.7
Sample B Female 131.0
Sample C Male 159.5
Sample D Male 190.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 166.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 166.1
Samples: 4

Max nTPM: 176.2
Min nTPM: 153.6
Sample A Male 176.2
Sample B Male 153.6
Sample C Female 171.7
Sample D Female 162.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.8
69752059 Antisense, RP_050505_01_A06, Mouse strain C57BL/6J (56 days, male) 7.8
Pons
Expression energy: 7.7
69752059 Antisense, RP_050505_01_A06, Mouse strain C57BL/6J (56 days, male) 7.7

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