We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL21
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL21
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1430.2 nTPM
HPA:1129.4 nTPM
GTEx:1430.2 nTPM
FANTOM5:33.2 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047252
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1129.4
overview
Male, age 65
Small intestine sample 232
nTPM: 1375.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1149.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1002.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 989.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1430.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1430.2
Samples: 187

Max nTPM: 3771.9
Min nTPM: 669.2
Std nTPM: 492.5
Median nTPM: 1372.7
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3771.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 3470.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2779.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2724.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2675.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2630.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2515.1
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2447.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2435.1
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2391.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2369.6
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2360.0
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2221.8
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2186.5
GTEX-183FY-1626-SM-793D8 20-29 years, male 2140.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2030.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2009.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2000.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1999.2
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1985.1
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1964.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1961.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1940.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1892.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1872.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1870.2
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1852.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1850.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1826.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1819.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1803.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1802.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1798.9
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1782.2
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1780.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1769.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1762.4
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1759.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1756.2
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1746.4
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1743.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1741.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1734.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1726.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1719.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1684.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1682.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1677.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1671.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1652.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1641.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1620.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1613.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1609.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1588.9
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1584.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1583.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1580.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1574.2
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1572.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1571.9
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1571.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1557.8
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1554.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1548.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1546.2
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1536.7
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1521.0
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1510.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1503.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1499.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1494.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1492.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1492.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1490.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1477.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1476.5
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1476.1
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1473.7
GTEX-1192X-2526-SM-59868 50-59 years, male 1461.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1432.0
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1415.2
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1413.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1405.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1396.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1392.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1391.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1389.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1384.6
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1383.5
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1382.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1378.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1373.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1372.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1368.5
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1363.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1338.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1338.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1338.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1333.7
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1331.3
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1323.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1323.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1316.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1310.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1310.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1292.5
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1286.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1277.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1240.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1233.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1232.4
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1231.7
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1230.9
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1214.5
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1206.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1205.8
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1192.8
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1190.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1185.3
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1172.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1172.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1171.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1170.2
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1169.0
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1164.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1161.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1159.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1155.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1140.6
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1137.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1132.5
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1128.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1112.0
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1103.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1100.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1083.4
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1083.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1083.1
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1081.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1076.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1060.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1051.3
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1039.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1038.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1037.0
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1035.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1030.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1018.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1008.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1004.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1002.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1001.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 999.5
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 999.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 998.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 996.8
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 990.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 985.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 976.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 969.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 947.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 942.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 936.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 934.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 914.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 908.3
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 894.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 892.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 859.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 857.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 853.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 842.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 838.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 834.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 830.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 825.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 819.4
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 818.5
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 809.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 805.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 784.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 756.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 753.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 695.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 689.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 669.2
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

33.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 33.2
FF:10024-101D6 15,40,85 years, mixed 33.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org