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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:494.5 nTPM
FANTOM5:485.9 Scaled Tags Per Million
Pig:0.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043717
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

494.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 494.5
Samples: 246

Max nTPM: 1119.9
Min nTPM: 284.6
Std nTPM: 116.8
Median nTPM: 472.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1119.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 987.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 926.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 871.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 848.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 821.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 794.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 762.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 748.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 746.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 745.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 735.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 735.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 727.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 706.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 689.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 688.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 678.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 675.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 663.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 656.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 651.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 650.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 644.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 630.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 617.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 616.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 615.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 614.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 610.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 605.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 603.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 603.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 602.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 600.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 584.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 580.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 580.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 575.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 574.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 574.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 573.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 573.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 572.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 564.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 564.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 564.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 563.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 562.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 561.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 559.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 559.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 551.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 550.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 549.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 549.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 547.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 543.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 542.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 541.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 538.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 537.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 537.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 537.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 535.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 535.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 535.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 535.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 534.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 532.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 528.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 528.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 527.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 524.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 522.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 522.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 522.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 521.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 520.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 520.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 520.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 517.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 514.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 514.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 513.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 511.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 511.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 507.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 505.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 504.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 501.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 501.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 500.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 499.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 499.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 499.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 498.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 498.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 498.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 496.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 495.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 495.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 495.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 494.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 494.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 494.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 493.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 493.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 493.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 489.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 489.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 488.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 488.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 487.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 484.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 484.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 484.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 484.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 475.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 474.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 474.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 473.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 473.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 472.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 472.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 470.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 469.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 468.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 467.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 466.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 465.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 464.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 464.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 464.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 462.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 461.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 461.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 461.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 459.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 458.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 456.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 455.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 455.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 453.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 453.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 453.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 451.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 450.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 450.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 448.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 448.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 448.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 447.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 447.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 446.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 444.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 444.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 441.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 437.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 437.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 435.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 435.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 434.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 434.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 431.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 431.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 428.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 428.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 426.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 426.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 426.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 425.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 425.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 425.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 424.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 423.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 423.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 423.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 422.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 422.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 422.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 420.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 417.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 416.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 416.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 416.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 415.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 413.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 411.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 410.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 410.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 409.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 407.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 407.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 405.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 404.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 404.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 403.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 402.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 402.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 400.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 399.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 398.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 397.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 396.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 396.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 394.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 391.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 391.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 391.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 391.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 390.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 388.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 386.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 385.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 381.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 380.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 380.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 378.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 377.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 375.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 374.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 373.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 373.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 372.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 371.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 369.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 368.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 367.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 365.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 363.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 362.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 361.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 358.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 357.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 355.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 351.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 349.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 348.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 347.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 343.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 335.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 334.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 334.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 320.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 284.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

485.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 485.9
FF:10164-103B2 76 years, female 485.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Pig sample Sample description nTPM
Caudate
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

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