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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:285.3 nTPM
HPA Brain:99.5 nTPM
GTEx:285.3 nTPM
FANTOM5:306.4 Scaled Tags Per Million
Pig:177.3 nTPM
Mouse:328.6 nTPM
Allen mouse:1.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044572Antibody HPA056798Antibody CAB016733Antibody CAB034368
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells MediumNot detectedMediumMedium









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 78.7
1857 Female, age 85, left hemisphere 150.2
1854 Male, age 80, left hemisphere 95.4
2290 Female, age 72, unknown 94.0
2846 Female, age 79, unknown 92.3
2288 Male, age 75, left hemisphere 67.4
1781 Male, age 74, unknown 48.3
2481 Female, age 94, left hemisphere 46.1
2289 Male, age 61, right hemisphere 35.7
Globus pallidus, externus
nTPM: 4.6
2646 Male, age 61, right hemisphere 7.9
2772 Female, age 79, unknown 4.9
2567 Female, age 72, unknown 4.0
2395 Male, age 75, both hemispheres 3.9
1996 Male, age 80, right hemisphere 2.1
Globus pallidus, internus
nTPM: 3.2
2483 Female, age 94, right hemisphere 11.5
2566 Female, age 72, unknown 6.6
2287 Male, age 75, right hemisphere 1.4
2037 Male, age 80, right hemisphere 1.2
2111 Female, age 85, right hemisphere 0.9
2778 Female, age 91, both hemispheres 0.7
1818 Male, age 74, unknown 0.2
Nucleus accumbens
nTPM: 87.0
1856 Female, age 91, right hemisphere 179.0
2698 Female, age 72, unknown 126.0
1806 Female, age 85, left hemisphere 123.2
1783 Male, age 74, unknown 78.4
2824 Male, age 61, right hemisphere 59.5
2286 Male, age 75, left hemisphere 49.0
2391 Female, age 94, left hemisphere 44.5
2732 Male, age 80, right hemisphere 36.4
Nucleus basalis of Meynert
nTPM: 54.7
2393 Male, age 80, right hemisphere 138.7
2484 Female, age 94, left hemisphere 48.5
2821 Male, age 75, both hemispheres 22.4
2569 Male, age 61, both hemispheres 9.4
Nucleus of the diagonal band
nTPM: 33.1
2775 Male, age 80, right hemisphere 57.4
2195 Female, age 85, both hemispheres 33.5
1812 Female, age 91, both hemispheres 33.2
2029 Male, age 61, right hemisphere 22.0
1979 Male, age 74, unknown 19.5
Putamen
nTPM: 99.5
1838 Male, age 80, right hemisphere 168.4
1937 Female, age 91, right hemisphere 138.1
2482 Female, age 94, left hemisphere 110.0
2489 Female, age 72, unknown 97.3
2466 Female, age 79, unknown 86.9
1829 Male, age 74, unknown 77.3
2647 Male, age 75, left hemisphere 18.5
Septal nuclei
nTPM: 21.2
1960 Male, age 74, unknown 32.0
2031 Female, age 72, unknown 28.8
2059 Female, age 85, both hemispheres 25.6
2009 Female, age 91, both hemispheres 23.8
2629 Female, age 94, right hemisphere 19.9
2394 Male, age 61, left hemisphere 11.6
2199 Male, age 80, right hemisphere 7.0
Stria terminalis, bed nucleus
nTPM: 42.1
2201 Male, age 74, unknown 58.1
1974 Female, age 91, both hemispheres 44.6
2486 Female, age 94, both hemispheres 23.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 218.3
Samples: 246

Max nTPM: 707.7
Min nTPM: 2.3
Std nTPM: 140.9
Median nTPM: 206.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 707.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 676.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 657.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 646.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 626.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 611.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 517.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 510.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 490.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 475.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 474.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 470.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 454.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 449.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 443.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 442.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 438.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 436.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 433.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 433.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 428.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 422.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 421.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 420.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 417.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 399.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 395.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 385.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 384.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 384.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 378.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 377.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 377.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 376.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 373.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 369.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 365.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 361.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 357.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 353.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 346.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 346.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 344.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 344.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 339.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 336.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 335.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 333.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 333.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 333.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 323.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 321.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 320.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 319.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 314.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 313.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 309.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 308.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 307.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 306.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 303.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 303.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 302.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 302.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 299.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 297.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 297.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 292.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 292.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 290.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 290.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 289.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 283.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 282.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 282.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 280.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 279.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 275.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 271.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 271.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 270.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 270.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 270.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 268.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 268.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 267.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 265.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 264.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 264.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 263.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 258.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 249.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 248.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 246.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 245.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 244.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 243.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 243.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 241.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 239.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 239.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 238.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 237.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 237.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 236.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 231.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 226.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 226.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 226.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 225.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 221.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 221.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 220.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 220.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 219.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 219.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 218.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 218.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 214.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 213.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 211.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 210.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 207.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 206.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 200.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 199.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 198.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 197.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 196.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 192.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 191.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 191.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 179.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 179.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 178.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 173.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 172.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 170.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 169.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 168.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 168.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 167.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 167.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 164.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 162.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 161.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 159.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 159.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 156.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 156.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 154.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 151.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 151.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 150.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 150.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 144.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 143.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 143.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 143.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 138.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 138.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 137.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 135.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 134.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 132.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 132.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 132.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 130.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 129.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 128.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 119.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 118.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 116.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 112.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 112.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 111.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 111.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 110.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 109.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 108.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 108.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 101.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 100.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 100.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 100.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 94.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 93.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 93.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 90.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 89.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 89.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 88.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 85.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 80.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 80.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 77.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 77.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 77.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 74.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 73.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 70.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 66.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 66.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 64.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 63.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 62.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 61.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 50.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 47.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 45.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 44.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 43.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 37.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 36.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 34.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 34.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 30.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 28.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 28.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 26.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 25.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 24.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 19.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 15.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 14.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 131.9
Samples: 246

Max nTPM: 668.0
Min nTPM: 8.8
Std nTPM: 107.7
Median nTPM: 104.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 668.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 571.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 470.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 459.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 450.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 428.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 407.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 402.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 363.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 349.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 343.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 340.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 340.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 332.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 328.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 313.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 313.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 307.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 305.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 298.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 296.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 292.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 292.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 287.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 281.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 270.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 270.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 270.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 268.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 263.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 262.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 260.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 258.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 256.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 254.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 253.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 251.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 250.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 249.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 249.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 247.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 237.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 230.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 221.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 219.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 217.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 213.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 211.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 203.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 202.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 202.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 197.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 192.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 190.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 189.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 187.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 185.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 185.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 180.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 178.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 177.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 177.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 170.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 168.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 168.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 168.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 166.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 166.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 165.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 164.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 158.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 154.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 153.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 150.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 148.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 148.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 146.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 146.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 146.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 144.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 144.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 143.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 143.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 142.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 140.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 140.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 138.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 138.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 137.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 137.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 136.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 136.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 134.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 134.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 134.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 132.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 131.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 131.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 129.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 128.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 127.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 126.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 126.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 126.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 123.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 121.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 120.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 119.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 119.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 117.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 116.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 116.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 116.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 114.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 114.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 114.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 111.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 111.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 106.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 105.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 104.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 104.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 104.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 104.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 101.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 101.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 101.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 101.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 100.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 100.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 100.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 98.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 98.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 98.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 97.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 95.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 94.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 93.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 92.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 92.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 92.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 91.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 89.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 89.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 89.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 85.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 84.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 83.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 80.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 80.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 80.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 80.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 79.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 75.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 72.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 71.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 70.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 69.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 69.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 66.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 65.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 64.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 64.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 63.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 63.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 62.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 62.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 60.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 59.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 58.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 57.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 56.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 55.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 55.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 54.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 52.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 52.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 51.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 51.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 50.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 49.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 48.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 48.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 48.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 47.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 47.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 47.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 46.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 46.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 46.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 45.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 45.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 45.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 44.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 44.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 43.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 42.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 41.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 39.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 39.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 38.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 37.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 37.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 37.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 35.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 35.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 34.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 34.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 31.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 31.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 30.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 29.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 28.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 28.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 28.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 27.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 27.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 27.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 25.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 25.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 24.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 24.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 23.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 21.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 21.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 19.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 19.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 17.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 17.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 15.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 14.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 13.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 12.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 10.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 10.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 9.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 8.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 8.8
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Brain - Putamen (basal ganglia)
Average nTPM: 285.3
Samples: 205

Max nTPM: 872.8
Min nTPM: 9.1
Std nTPM: 204.1
Median nTPM: 263.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 872.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 815.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 811.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 765.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 749.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 704.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 702.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 701.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 699.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 674.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 666.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 664.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 654.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 650.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 628.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 621.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 603.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 599.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 589.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 586.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 579.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 574.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 564.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 555.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 550.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 538.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 536.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 527.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 526.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 518.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 508.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 507.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 499.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 495.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 487.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 486.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 485.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 477.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 470.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 470.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 467.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 462.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 462.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 462.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 456.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 454.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 450.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 446.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 441.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 438.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 431.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 411.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 404.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 393.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 392.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 391.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 391.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 389.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 386.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 386.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 385.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 384.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 381.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 378.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 374.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 373.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 371.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 371.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 368.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 365.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 360.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 359.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 352.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 350.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 349.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 344.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 341.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 341.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 338.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 334.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 327.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 320.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 318.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 315.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 311.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 305.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 304.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 303.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 303.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 303.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 298.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 296.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 293.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 288.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 282.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 281.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 276.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 276.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 275.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 275.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 274.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 266.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 263.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 257.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 256.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 255.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 255.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 252.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 251.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 243.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 240.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 240.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 233.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 232.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 232.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 232.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 218.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 213.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 209.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 195.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 195.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 192.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 192.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 191.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 190.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 186.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 182.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 178.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 178.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 174.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 168.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 162.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 160.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 157.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 156.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 156.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 156.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 148.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 148.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 143.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 142.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 139.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 139.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 138.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 137.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 136.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 134.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 134.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 130.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 130.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 127.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 127.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 127.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 119.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 119.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 119.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 115.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 114.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 105.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 104.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 97.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 94.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 94.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 88.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 85.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 84.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 72.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 68.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 66.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 66.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 62.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 54.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 50.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 50.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 50.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 47.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 44.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 40.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 40.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 36.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 30.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 28.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 28.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 25.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 22.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 20.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 19.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 19.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 18.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 17.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 17.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 15.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 13.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 9.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 9.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

306.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 202.8
FF:10164-103B2 76 years, female 202.8
Nucleus accumbens
Scaled Tags Per Million: 205.8
FF:10037-101F1 23-56 years, mixed 205.8
Putamen
Scaled Tags Per Million: 306.4
FF:10176-103C5 60 years, female 306.4
Globus pallidus
Scaled Tags Per Million: 116.4
FF:10175-103C4 60 years, female 222.8
FF:10161-103A8 76 years, female 10.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.3
Pig sample Sample description nTPM
Caudate
nTPM: 127.4
Samples: 4

Max nTPM: 154.1
Min nTPM: 91.0
Sample A Female 91.0
Sample B Female 125.2
Sample C Male 139.3
Sample D Male 154.1
Putamen
nTPM: 177.4
Samples: 4

Max nTPM: 335.1
Min nTPM: 84.5
Sample A Female 84.5
Sample B Female 104.6
Sample C Male 335.1
Sample D Male 185.2
Septum
nTPM: 63.9
Samples: 4

Max nTPM: 146.7
Min nTPM: 8.2
Sample A Female 80.0
Sample B Female 146.7
Sample C Male 8.2
Sample D Male 20.7
Ventral pallidum
nTPM: 121.5
Samples: 4

Max nTPM: 196.0
Min nTPM: 89.2
Sample A Female 103.7
Sample B Female 96.9
Sample C Male 196.0
Sample D Male 89.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 328.7
Samples: 4

Max nTPM: 345.1
Min nTPM: 300.4
Sample A Male 300.4
Sample B Male 335.5
Sample C Female 345.1
Sample D Female 333.6
Septum
nTPM: 94.7
Samples: 4

Max nTPM: 151.4
Min nTPM: 65.5
Sample A Male 151.4
Sample B Male 72.7
Sample C Female 89.0
Sample D Female 65.5
Ventral forebrain
nTPM: 300.1
Samples: 4

Max nTPM: 347.8
Min nTPM: 230.1
Sample A Male 347.8
Sample B Male 230.1
Sample C Female 281.1
Sample D Female 341.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
100055044 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 2.1
718 Antisense, RP_Baylor_103333, Mouse strain C57BL/6J (56 days, male) 1.8
100055050 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 1.8
100055063 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 1.7
717 Antisense, RP_Baylor_103333, Mouse strain C57BL/6J (56 days, male) 1.5
719 Sense, RPS_Baylor_37109, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 1.2
100055050 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 2.0
100055044 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 1.9
718 Antisense, RP_Baylor_103333, Mouse strain C57BL/6J (56 days, male) 1.5
100055063 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 1.5
717 Antisense, RP_Baylor_103333, Mouse strain C57BL/6J (56 days, male) 0.8
719 Sense, RPS_Baylor_37109, Mouse strain C57BL/6J (56 days, male) 0.0

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