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TUBA1B
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  • TUBA1B
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:464.0 nTPM
FANTOM5:1007.7 Scaled Tags Per Million
Pig:461.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039247Antibody HPA043684Antibody HPA063394Antibody CAB011513
Glial cells MediumNot detectedNot detectedLow
Neuronal cells HighHighLowMedium








CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

464.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 464.0
Samples: 246

Max nTPM: 1793.0
Min nTPM: 260.1
Std nTPM: 164.9
Median nTPM: 441.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1793.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1672.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1025.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1018.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 756.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 756.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 740.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 728.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 727.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 709.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 697.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 682.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 677.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 672.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 672.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 655.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 649.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 638.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 633.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 631.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 631.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 620.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 618.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 608.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 607.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 605.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 603.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 601.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 598.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 597.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 594.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 593.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 592.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 582.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 581.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 577.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 574.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 571.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 570.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 568.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 567.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 567.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 559.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 557.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 556.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 551.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 551.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 550.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 543.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 542.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 540.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 539.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 526.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 525.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 519.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 517.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 517.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 516.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 516.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 513.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 510.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 510.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 507.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 507.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 504.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 503.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 502.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 502.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 499.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 498.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 496.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 495.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 495.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 494.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 492.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 489.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 489.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 489.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 488.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 488.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 488.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 486.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 484.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 482.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 481.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 481.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 481.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 478.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 477.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 476.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 476.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 475.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 475.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 474.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 473.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 473.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 471.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 470.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 470.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 467.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 467.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 465.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 465.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 464.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 463.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 462.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 462.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 459.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 459.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 458.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 457.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 455.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 454.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 452.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 452.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 452.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 450.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 447.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 447.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 447.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 444.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 442.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 442.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 441.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 440.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 439.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 438.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 438.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 438.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 438.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 435.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 435.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 434.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 434.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 433.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 431.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 431.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 428.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 428.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 428.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 426.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 425.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 421.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 420.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 420.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 420.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 419.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 414.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 414.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 414.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 411.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 410.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 410.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 410.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 410.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 409.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 406.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 405.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 403.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 403.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 401.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 400.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 398.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 397.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 396.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 395.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 393.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 392.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 391.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 391.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 390.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 390.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 390.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 386.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 380.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 377.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 376.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 374.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 374.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 373.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 373.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 371.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 368.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 368.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 367.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 367.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 367.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 366.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 365.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 365.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 364.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 359.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 358.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 357.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 354.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 354.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 353.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 347.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 346.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 346.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 344.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 342.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 342.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 340.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 339.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 338.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 334.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 334.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 332.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 332.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 332.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 330.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 329.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 329.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 327.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 327.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 326.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 326.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 325.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 323.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 319.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 317.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 315.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 310.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 310.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 306.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 301.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 300.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 298.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 295.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 292.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 292.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 291.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 290.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 289.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 288.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 287.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 287.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 287.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 285.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 282.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 278.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 276.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 274.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 273.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 260.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1007.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1007.7
FF:10164-103B2 76 years, female 1007.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

461.9
Pig sample Sample description nTPM
Caudate
nTPM: 461.9
Samples: 4

Max nTPM: 630.8
Min nTPM: 329.2
Sample A Female 329.2
Sample B Female 523.5
Sample C Male 630.8
Sample D Male 364.2

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