We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SERPINB6
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SERPINB6
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:97.1 nTPM
HPA Brain:82.5 nTPM
GTEx:97.1 nTPM
FANTOM5:92.2 Scaled Tags Per Million
Mouse:39.0 nTPM
Allen mouse:3.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA009668Antibody HPA012736
Glial cells MediumMedium
Neuronal cells LowLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 63.2
2289 Male, age 61, right hemisphere 72.0
2481 Female, age 94, left hemisphere 67.3
1854 Male, age 80, left hemisphere 64.0
1857 Female, age 85, left hemisphere 63.5
2846 Female, age 79, unknown 62.9
2288 Male, age 75, left hemisphere 60.9
2290 Female, age 72, unknown 59.3
1781 Male, age 74, unknown 55.9
Globus pallidus, externus
nTPM: 82.5
2567 Female, age 72, unknown 86.8
1996 Male, age 80, right hemisphere 86.7
2646 Male, age 61, right hemisphere 86.5
2772 Female, age 79, unknown 77.2
2395 Male, age 75, both hemispheres 75.1
Globus pallidus, internus
nTPM: 81.8
2111 Female, age 85, right hemisphere 96.5
2566 Female, age 72, unknown 85.6
2778 Female, age 91, both hemispheres 84.5
1818 Male, age 74, unknown 82.2
2037 Male, age 80, right hemisphere 79.0
2287 Male, age 75, right hemisphere 73.7
2483 Female, age 94, right hemisphere 71.3
Nucleus accumbens
nTPM: 61.4
2732 Male, age 80, right hemisphere 73.4
2391 Female, age 94, left hemisphere 65.8
2286 Male, age 75, left hemisphere 64.0
2698 Female, age 72, unknown 63.3
2824 Male, age 61, right hemisphere 60.4
1806 Female, age 85, left hemisphere 57.0
1783 Male, age 74, unknown 54.7
1856 Female, age 91, right hemisphere 52.6
Nucleus basalis of Meynert
nTPM: 68.9
2569 Male, age 61, both hemispheres 80.9
2393 Male, age 80, right hemisphere 67.8
2821 Male, age 75, both hemispheres 65.4
2484 Female, age 94, left hemisphere 61.5
Nucleus of the diagonal band
nTPM: 52.2
1979 Male, age 74, unknown 60.2
2195 Female, age 85, both hemispheres 52.2
2029 Male, age 61, right hemisphere 50.8
2775 Male, age 80, right hemisphere 49.2
1812 Female, age 91, both hemispheres 48.7
Putamen
nTPM: 64.0
2647 Male, age 75, left hemisphere 69.2
2489 Female, age 72, unknown 68.0
2482 Female, age 94, left hemisphere 67.4
1937 Female, age 91, right hemisphere 63.7
1829 Male, age 74, unknown 61.4
1838 Male, age 80, right hemisphere 59.3
2466 Female, age 79, unknown 58.7
Septal nuclei
nTPM: 56.3
2199 Male, age 80, right hemisphere 68.2
2394 Male, age 61, left hemisphere 65.7
2059 Female, age 85, both hemispheres 58.3
2009 Female, age 91, both hemispheres 53.9
2629 Female, age 94, right hemisphere 53.4
2031 Female, age 72, unknown 49.0
1960 Male, age 74, unknown 45.9
Stria terminalis, bed nucleus
nTPM: 55.0
2201 Male, age 74, unknown 61.3
1974 Female, age 91, both hemispheres 53.6
2486 Female, age 94, both hemispheres 50.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.8
Samples: 246

Max nTPM: 202.0
Min nTPM: 28.4
Std nTPM: 29.0
Median nTPM: 80.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 202.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 188.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 176.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 170.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 170.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 153.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 144.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 143.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 142.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 140.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 140.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 140.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 138.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 136.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 135.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 130.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 128.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 128.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 128.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 127.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 126.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 126.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 125.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 125.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 124.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 124.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 123.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 122.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 121.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 120.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 118.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 116.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 115.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 114.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 114.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 113.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 112.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 111.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 111.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 110.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 110.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 110.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 110.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 107.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 106.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 106.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 105.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 105.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 104.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 104.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 104.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 103.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 103.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 103.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 102.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 102.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 102.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 101.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 101.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 100.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 100.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 100.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 100.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 100.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 100.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 99.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 99.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 98.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 98.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 98.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 96.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 96.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 96.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 95.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 95.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 95.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 94.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 94.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 93.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 93.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 93.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 93.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 93.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 92.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 92.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 92.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 91.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 91.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 90.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 89.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 89.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 89.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 88.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 88.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 87.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 87.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 87.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 87.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 86.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 86.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 86.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 85.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 85.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 85.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 85.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 85.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 84.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 84.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 83.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 83.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 83.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 81.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 81.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 80.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 79.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 79.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 78.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 77.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 77.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 77.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 76.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 76.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 75.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 75.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 75.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 75.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 75.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 75.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 74.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 74.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 74.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 74.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 73.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 73.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 72.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 72.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 71.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 71.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 70.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 70.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 69.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 69.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 68.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 68.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 67.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 66.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 66.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 66.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 65.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 65.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 64.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 64.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 64.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 63.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 62.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 62.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 61.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 61.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 61.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 61.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 60.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 59.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 58.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 58.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 58.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 58.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 58.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 58.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 58.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 57.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 57.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 56.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 56.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 56.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 55.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 55.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 54.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 53.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 53.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 52.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 52.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 52.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 51.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 51.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 50.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 49.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 46.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 43.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 43.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 43.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 42.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 40.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 37.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 28.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 75.1
Samples: 246

Max nTPM: 203.6
Min nTPM: 32.0
Std nTPM: 30.4
Median nTPM: 66.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 203.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 179.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 171.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 170.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 165.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 161.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 155.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 138.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 138.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 138.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 137.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 137.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 132.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 130.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 129.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 126.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 125.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 124.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 124.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 122.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 119.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 119.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 118.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 118.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 116.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 115.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 115.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 114.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 114.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 114.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 113.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 112.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 112.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 111.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 111.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 111.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 109.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 106.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 105.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 105.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 103.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 101.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 101.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 101.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 100.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 99.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 99.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 98.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 98.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 97.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 97.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 97.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 96.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 95.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 95.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 95.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 94.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 94.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 92.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 92.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 92.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 91.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 91.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 90.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 90.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 90.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 89.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 89.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 86.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 85.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 85.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 85.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 83.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 83.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 83.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 83.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 83.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 82.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 82.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 82.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 82.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 81.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 81.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 80.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 80.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 80.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 80.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 80.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 80.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 79.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 79.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 78.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 78.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 77.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 77.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 76.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 76.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 75.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 75.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 75.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 74.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 74.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 72.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 72.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 71.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 71.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 71.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 71.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 71.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 70.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 70.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 70.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 69.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 69.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 69.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 68.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 68.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 67.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 67.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 67.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 66.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 66.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 66.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 65.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 65.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 65.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 64.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 64.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 63.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 63.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 63.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 63.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 62.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 62.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 62.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 61.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 61.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 61.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 61.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 60.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 60.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 60.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 60.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 60.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 59.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 59.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 58.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 58.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 57.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 57.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 56.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 56.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 56.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 56.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 56.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 56.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 56.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 55.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 55.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 55.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 55.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 54.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 54.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 54.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 54.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 54.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 54.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 53.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 53.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 53.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 53.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 52.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 52.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 52.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 52.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 52.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 52.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 51.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 51.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 51.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 50.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 50.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 49.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 49.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 49.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 49.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 48.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 48.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 48.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 48.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 47.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 47.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 46.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 46.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 45.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 45.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 44.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 44.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 44.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 43.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 43.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 43.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 42.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 42.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 42.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 42.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 42.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 42.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 41.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 41.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 40.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 40.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 40.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 39.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 39.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 38.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 38.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 38.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 37.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 37.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 36.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 34.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 33.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 32.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 97.1
Samples: 205

Max nTPM: 203.9
Min nTPM: 36.9
Std nTPM: 32.6
Median nTPM: 90.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 203.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 201.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 184.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 182.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 173.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 170.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 166.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 166.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 164.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 163.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 159.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 157.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 157.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 154.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 154.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 153.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 150.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 149.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 147.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 146.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 145.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 142.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 141.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 141.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 139.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 138.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 138.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 137.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 136.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 135.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 130.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 129.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 129.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 127.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 127.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 126.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 126.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 126.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 125.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 125.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 124.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 123.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 122.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 121.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 121.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 120.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 120.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 120.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 120.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 119.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 117.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 117.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 117.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 114.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 114.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 113.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 112.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 112.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 112.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 111.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 110.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 110.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 109.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 109.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 108.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 108.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 108.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 107.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 107.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 106.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 106.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 105.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 104.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 104.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 104.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 103.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 103.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 103.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 103.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 102.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 102.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 101.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 100.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 100.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 99.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 99.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 99.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 97.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 96.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 95.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 95.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 95.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 95.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 95.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 94.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 94.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 93.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 93.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 91.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 91.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 91.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 90.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 90.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 89.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 89.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 88.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 87.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 87.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 87.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 87.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 86.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 86.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 86.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 85.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 85.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 84.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 84.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 83.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 83.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 82.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 81.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 81.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 81.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 81.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 80.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 80.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 80.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 79.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 78.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 78.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 77.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 76.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 75.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 75.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 75.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 74.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 74.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 74.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 74.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 74.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 74.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 74.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 73.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 73.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 73.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 72.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 72.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 71.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 71.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 71.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 70.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 70.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 70.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 70.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 69.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 68.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 68.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 68.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 68.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 68.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 67.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 67.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 66.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 65.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 65.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 65.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 65.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 65.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 64.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 63.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 63.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 62.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 62.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 62.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 61.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 61.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 61.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 61.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 60.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 60.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 59.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 59.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 58.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 57.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 56.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 55.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 55.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 54.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 51.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 47.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 47.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

92.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 52.7
FF:10164-103B2 76 years, female 52.7
Nucleus accumbens
Scaled Tags Per Million: 43.2
FF:10037-101F1 23-56 years, mixed 43.2
Putamen
Scaled Tags Per Million: 34.8
FF:10176-103C5 60 years, female 34.8
Globus pallidus
Scaled Tags Per Million: 92.2
FF:10161-103A8 76 years, female 100.4
FF:10175-103C4 60 years, female 83.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 38.8
Samples: 4

Max nTPM: 40.5
Min nTPM: 37.0
Sample A Male 40.5
Sample B Male 40.0
Sample C Female 37.0
Sample D Female 37.8
Septum
nTPM: 39.0
Samples: 4

Max nTPM: 41.5
Min nTPM: 37.1
Sample A Male 38.7
Sample B Male 37.1
Sample C Female 41.5
Sample D Female 38.6
Ventral forebrain
nTPM: 34.6
Samples: 4

Max nTPM: 37.4
Min nTPM: 33.1
Sample A Male 34.5
Sample B Male 33.2
Sample C Female 37.4
Sample D Female 33.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.1
69028491 Antisense, RP_050316_01_D07, Mouse strain C57BL/6J (56 days, male) 5.4
74425564 Antisense, RP_051214_02_H05, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 2.6
69028491 Antisense, RP_050316_01_D07, Mouse strain C57BL/6J (56 days, male) 4.4
74425564 Antisense, RP_051214_02_H05, Mouse strain C57BL/6J (56 days, male) 0.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org