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RPL23
HPA
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  • RPL23
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:574.7 nTPM
FANTOM5:225.8 Scaled Tags Per Million
Pig:24.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003373
Glial cells Not detected
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

574.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 574.7
Samples: 246

Max nTPM: 1314.1
Min nTPM: 309.5
Std nTPM: 158.5
Median nTPM: 542.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1314.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1139.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1108.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1093.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1044.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1036.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1034.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1021.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 996.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 944.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 917.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 915.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 897.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 879.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 870.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 852.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 835.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 832.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 812.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 802.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 795.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 792.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 780.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 765.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 760.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 755.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 748.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 745.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 730.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 719.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 718.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 712.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 709.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 707.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 707.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 704.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 696.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 695.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 695.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 693.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 692.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 688.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 684.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 682.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 680.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 680.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 679.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 679.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 675.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 673.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 672.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 667.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 664.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 664.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 662.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 660.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 657.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 656.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 655.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 652.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 650.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 649.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 648.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 645.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 645.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 643.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 640.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 640.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 636.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 635.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 631.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 627.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 626.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 624.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 618.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 618.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 617.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 611.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 608.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 607.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 607.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 605.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 601.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 598.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 598.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 594.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 592.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 592.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 591.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 591.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 590.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 589.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 589.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 589.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 589.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 585.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 582.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 580.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 579.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 579.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 579.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 578.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 575.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 573.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 573.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 569.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 569.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 568.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 565.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 564.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 562.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 560.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 556.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 556.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 553.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 553.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 551.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 548.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 545.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 544.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 544.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 542.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 542.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 541.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 540.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 540.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 540.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 538.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 538.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 537.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 534.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 533.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 532.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 530.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 529.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 526.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 526.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 524.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 523.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 523.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 521.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 518.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 518.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 515.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 514.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 514.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 513.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 512.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 512.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 511.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 510.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 509.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 507.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 506.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 506.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 506.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 506.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 505.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 502.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 502.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 502.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 501.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 499.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 497.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 492.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 491.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 490.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 488.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 485.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 484.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 484.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 483.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 482.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 479.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 479.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 477.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 477.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 475.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 474.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 474.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 474.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 472.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 472.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 470.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 467.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 466.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 464.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 463.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 463.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 463.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 460.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 456.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 456.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 452.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 450.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 449.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 448.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 445.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 443.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 442.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 441.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 435.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 435.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 434.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 433.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 433.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 432.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 432.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 431.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 430.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 430.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 426.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 424.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 420.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 420.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 418.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 418.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 415.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 412.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 412.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 410.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 407.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 401.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 401.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 399.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 398.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 395.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 394.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 394.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 393.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 392.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 390.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 390.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 383.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 381.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 380.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 380.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 379.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 373.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 370.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 365.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 351.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 351.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 351.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 338.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 309.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

225.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 225.8
FF:10164-103B2 76 years, female 225.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.0
Pig sample Sample description nTPM
Caudate
nTPM: 24.0
Samples: 4

Max nTPM: 29.8
Min nTPM: 21.1
Sample A Female 29.8
Sample B Female 23.5
Sample C Male 21.1
Sample D Male 21.7

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