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RPL23
HPA
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1254.3 nTPM
HPA:728.4 nTPM
GTEx:1254.3 nTPM
FANTOM5:336.2 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003373
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

728.4
overview
Male, age 65
Small intestine sample 232
nTPM: 854.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 717
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 689
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 652.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1254.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1254.3
Samples: 187

Max nTPM: 2911.0
Min nTPM: 575.0
Std nTPM: 379.5
Median nTPM: 1217.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2911.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2542.2
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2374.2
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2369.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2260.4
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2179.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2171.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2109.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2108.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2021.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1914.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1851.8
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1849.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1838.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 1813.6
GTEX-1192X-2526-SM-59868 50-59 years, male 1760.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1749.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1728.8
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1718.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1654.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1651.9
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1648.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1646.7
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1634.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1622.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1611.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1604.9
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1576.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1572.1
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1567.5
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1564.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1550.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1546.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1546.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1529.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1529.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1519.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1513.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1500.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1496.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1494.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1486.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1485.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1461.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1453.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1448.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1443.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1443.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1435.1
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1430.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1424.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1412.1
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1407.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1406.4
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1405.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1401.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1368.6
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1362.1
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1360.9
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1359.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1356.1
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1347.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1339.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1336.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1332.0
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1320.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1307.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1306.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1305.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1302.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1299.6
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1291.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1280.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1280.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1280.6
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1256.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1251.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1250.7
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1249.7
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1249.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1249.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1248.9
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1248.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1243.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1238.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1233.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1231.7
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1228.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1227.7
GTEX-1C475-1426-SM-793CH 40-49 years, female 1227.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1225.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1225.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1223.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1217.2
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1216.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1212.4
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1211.0
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1197.3
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1197.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1196.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1194.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1185.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1180.0
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1178.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1164.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1161.3
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1147.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1140.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1138.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1132.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1129.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1128.6
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1124.5
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1115.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1107.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1106.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1105.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1104.8
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1102.1
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1101.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1100.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1089.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1089.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1088.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1087.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1075.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1073.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1064.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1051.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1045.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1040.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1038.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1038.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1029.3
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1029.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1001.4
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 996.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 993.9
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 991.9
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 988.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 985.6
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 969.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 969.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 968.1
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 959.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 959.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 956.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 955.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 947.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 943.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 942.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 942.3
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 941.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 933.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 917.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 905.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 905.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 895.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 892.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 887.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 882.3
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 876.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 865.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 850.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 847.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 843.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 816.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 798.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 788.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 784.4
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 784.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 770.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 767.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 766.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 762.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 761.6
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 759.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 753.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 744.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 739.1
GTEX-YFCO-1326-SM-664NV 40-49 years, male 738.7
GTEX-1122O-1326-SM-5H11F 60-69 years, female 731.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 724.8
GTEX-111YS-1426-SM-5GID8 60-69 years, male 717.8
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 699.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 669.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 575.0
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

336.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 336.2
FF:10024-101D6 15,40,85 years, mixed 336.2

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