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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:193.2 nTPM
HPA:193.2 nTPM
GTEx:146.1 nTPM
FANTOM5:56.7 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041437
Cholangiocytes Medium
Hepatocytes Medium


LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.2
N/A
Female, age 60
Liver sample 21
nTPM: 189
overview
Male, age 54
Liver sample 23
nTPM: 164.9
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 212.4
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 149.5
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 206
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 180.2
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 184.1
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 278.5
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 203.5
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 164.2
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

146.1
GTEx sample id Sample description nTPM
Liver
Average nTPM: 146.1
Samples: 226

Max nTPM: 326.3
Min nTPM: 70.2
Std nTPM: 36.2
Median nTPM: 139.4
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 326.3
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 284.6
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 281.2
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 279.7
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 254.5
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 245.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 244.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 231.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 215.3
GTEX-REY6-1226-SM-48FDR 60-69 years, male 209.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 207.5
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 199.3
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 196.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 196.5
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 195.7
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 194.3
GTEX-14XAO-0226-SM-68728 60-69 years, female 193.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 193.1
GTEX-14PJO-1726-SM-68719 60-69 years, male 193.0
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 192.7
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 191.8
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 188.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 187.0
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 186.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 186.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 186.0
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 185.3
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 184.9
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 184.8
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 184.4
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 183.3
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 183.0
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 182.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 180.9
GTEX-QEL4-1226-SM-447A4 50-59 years, male 180.9
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 180.4
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 178.4
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 178.3
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 175.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 173.7
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 173.2
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 172.5
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 171.0
GTEX-13113-1326-SM-5GCOI 60-69 years, female 170.3
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 170.1
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 168.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 168.1
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 168.1
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 167.3
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 166.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 166.2
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 164.8
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 163.8
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 163.5
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 163.0
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 162.4
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 162.2
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 161.8
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 161.7
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 161.4
GTEX-RU72-1426-SM-46MUF 50-59 years, female 161.3
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 161.0
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 160.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 159.4
GTEX-O5YV-0726-SM-EV798 60-69 years, female 159.0
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 158.7
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 158.3
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 157.4
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 157.1
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 157.0
GTEX-RN64-1826-SM-48FDV 50-59 years, male 156.4
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 156.3
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 155.9
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 155.1
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 154.6
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 154.2
GTEX-18465-1626-SM-7LG6N 50-59 years, male 153.6
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 153.6
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 153.4
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 152.6
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 152.5
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 152.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 152.0
GTEX-14E7W-1526-SM-6871X 70-79 years, male 151.7
GTEX-14JG1-1626-SM-664NH 40-49 years, male 151.2
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 150.8
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 150.6
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 150.4
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 149.7
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 149.6
GTEX-11ZUS-2526-SM-59872 30-39 years, male 149.2
GTEX-QESD-2026-SM-447BI 20-29 years, male 149.2
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 149.2
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 148.8
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 147.0
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 146.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 146.1
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 145.6
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 145.5
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 145.2
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 144.7
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 144.2
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 144.1
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 143.4
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 143.3
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 142.9
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 141.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 141.1
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 140.7
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 140.2
GTEX-14PHX-0526-SM-664NW 50-59 years, male 139.7
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 139.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 139.6
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 139.2
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 139.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 138.6
GTEX-18A66-2026-SM-7189C 60-69 years, male 138.4
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 138.3
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 138.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 137.5
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 137.2
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 137.2
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 136.5
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 136.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 135.7
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 135.7
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 135.5
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 134.8
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 134.2
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 133.9
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 133.5
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 133.0
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 131.8
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 131.7
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 131.0
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 130.7
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 130.6
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 130.4
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 129.3
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 129.2
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 129.0
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 128.8
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 128.7
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 128.5
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 128.5
GTEX-YECK-1926-SM-4W21H 60-69 years, male 128.5
GTEX-Q734-0326-SM-48U15 40-49 years, female 127.0
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 126.9
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 126.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 126.5
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 126.5
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 126.1
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 125.8
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 125.3
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 125.2
GTEX-S33H-1626-SM-4AD68 30-39 years, male 125.2
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 124.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 124.5
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 124.4
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 124.1
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 123.9
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 123.7
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 123.7
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 123.3
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 122.7
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 122.5
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 122.1
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 122.1
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 122.0
GTEX-13112-1426-SM-5EGH8 50-59 years, male 121.9
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 121.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 121.4
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 120.5
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 120.5
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 120.4
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 120.4
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 120.1
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 120.0
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 119.7
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 119.6
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 119.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 119.1
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 118.6
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 118.1
GTEX-1399T-0826-SM-5IFES 60-69 years, male 117.9
GTEX-1B932-1426-SM-793AN 40-49 years, female 117.7
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 117.2
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 117.2
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 117.1
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 117.0
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 116.9
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 116.8
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 116.1
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 116.1
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 115.8
GTEX-R53T-0326-SM-48FEC 50-59 years, female 115.7
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 115.2
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 115.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 114.2
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 113.4
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 111.0
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 109.3
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 109.0
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 108.9
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 108.7
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 108.7
GTEX-1B933-1226-SM-731DW 50-59 years, female 108.6
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 107.6
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 107.4
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 106.3
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 106.1
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 104.2
GTEX-X261-1726-SM-4PQYT 50-59 years, male 103.4
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 101.1
GTEX-17F96-1226-SM-79OK2 70-79 years, male 101.0
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 99.2
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 98.5
GTEX-144GL-1426-SM-79OMA 50-59 years, male 96.0
GTEX-11GSP-0626-SM-5986T 60-69 years, female 95.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 93.5
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 92.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 91.2
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 90.9
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 87.5
GTEX-17HHE-0126-SM-79398 50-59 years, male 86.7
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 70.2
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

56.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 56.7
FF:10018-101C9 64,69,70 years, mixed 56.7

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