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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:200.5 nTPM
GTEx:200.5 nTPM
FANTOM5:176.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB025915
Squamous epithelial cells Medium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 200.5
Samples: 156

Max nTPM: 970.8
Min nTPM: 3.1
Std nTPM: 149.8
Median nTPM: 162.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 970.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 704.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 622.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 562.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 561.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 550.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 509.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 484.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 474.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 469.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 445.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 438.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 421.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 404.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 386.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 383.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 381.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 379.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 369.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 368.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 367.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 362.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 361.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 358.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 358.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 354.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 350.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 343.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 331.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 320.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 310.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 305.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 285.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 285.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 275.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 267.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 264.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 264.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 260.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 254.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 253.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 249.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 247.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 246.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 245.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 242.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 240.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 235.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 232.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 230.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 229.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 228.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 228.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 224.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 221.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 221.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 217.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 217.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 216.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 212.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 198.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 198.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 195.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 194.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 193.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 193.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 190.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 189.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 188.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 187.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 181.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 179.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 178.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 177.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 165.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 164.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 163.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 163.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 161.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 157.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 154.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 153.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 149.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 148.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 147.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 147.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 147.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 143.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 141.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 141.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 139.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 137.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 136.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 134.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 133.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 132.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 130.8
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 129.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 127.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 125.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 122.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 121.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 118.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 114.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 113.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 112.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 108.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 106.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 103.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 101.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 100.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 98.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 97.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 97.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 96.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 93.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 92.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 92.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 90.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 90.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 89.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 89.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 81.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 81.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 80.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 79.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 78.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 75.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 72.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 72.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 67.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 66.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 65.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 64.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 63.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 58.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 58.5
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 55.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 55.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 54.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 52.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 51.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 44.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 42.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 40.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 39.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 39.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 38.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 38.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 36.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 31.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 30.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 28.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 23.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 15.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 3.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

176.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 176.2
FF:10204-103F6 68 years, female 176.2

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