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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
105.6
nTPM
GTEx:
105.6
nTPM
FANTOM5:
133.7
Scaled Tags Per Million
Pig:
39.1
nTPM
Mouse:
227.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
105.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 105.6
Samples: 105
Max nTPM: 184.9
Min nTPM: 24.9
Std nTPM: 39.5
Median nTPM:
356_1
87 years, female
184.9
506_1
65 years, male
184.7
452_1
88 years, female
183.5
163_1
78 years, male
182.0
352_1
62 years, male
176.6
354_1
81 years, female
175.6
218_1
71 years, female
174.0
353_1
82 years, female
170.0
319_1
81 years, male
168.1
377_1
82 years, female
163.1
350_1
84 years, female
161.0
351_1
91 years, male
160.1
177_1
74 years, male
160.0
321_1
62 years, female
159.0
386_1
76 years, male
157.0
172_1
72 years, female
155.3
355_1
70 years, female
153.5
320_1
89 years, female
143.9
349_1
83 years, male
141.8
243_1
75 years, male
141.6
99_1
64 years, male
137.6
394_1
75 years, female
137.4
447_1
81 years, male
136.6
379_1
60 years, male
133.2
293_1
68 years, female
131.7
335_1
73 years, female
130.3
295_1
61 years, female
129.4
322_1
76 years, male
129.1
6_1
73 years, female
127.6
286_1
68 years, female
126.9
425_1
59 years, female
126.3
115_1
83 years, male
125.1
384_1
83 years, male
124.3
406_1
79 years, male
124.1
318_1
68 years, male
123.9
173_1
67 years, male
121.7
376_1
75 years, female
121.7
404_1
82 years, female
120.4
503_1
68 years, male
120.0
375_1
74 years, female
119.5
189_1
76 years, male
119.2
237_1
82 years, male
118.7
317_1
60 years, male
117.5
4_1
88 years, female
114.4
2_1
77 years, female
114.2
316_1
62 years, male
112.4
251_1
78 years, male
112.3
292_1
71 years, male
111.3
264_1
73 years, female
108.7
480_1
63 years, male
108.6
405_1
91 years, male
106.3
153_1
70 years, female
105.1
347_1
72 years, male
103.4
229_1
69 years, female
102.9
396_1
62 years, male
101.9
17_1
71 years, male
101.6
517_1
88 years, male
101.0
41_1
94 years, female
100.8
348_1
84 years, male
100.7
35_1
74 years, female
98.1
389_1
86 years, female
97.2
291_1
76 years, male
95.8
18_1
88 years, male
94.7
145_1
84 years, male
94.7
246_1
77 years, male
93.7
526_1
61 years, male
93.4
120_1
70 years, female
92.3
137_1
83 years, male
88.7
254_1
77 years, female
88.6
9_1
66 years, female
88.2
313_1
79 years, female
87.1
266_1
85 years, male
86.8
468_1
89 years, male
83.0
42_1
85 years, male
81.9
324_1
76 years, male
81.1
311_1
78 years, male
80.6
109_1
81 years, female
80.3
265_1
87 years, male
80.1
288_1
66 years, female
79.6
126_1
63 years, male
74.2
518_1
75 years, female
73.2
315_1
62 years, female
72.5
117_1
61 years, male
71.6
307_1
66 years, female
68.9
314_1
67 years, male
68.8
217_1
76 years, male
66.7
142_1
61 years, female
66.5
499_1
55 years, female
63.9
139_1
64 years, female
63.4
81_1
67 years, male
61.7
119_1
70 years, female
61.0
162_1
79 years, female
56.8
32_1
67 years, male
50.1
495_1
57 years, female
50.0
415_1
77 years, female
49.7
414_1
84 years, female
47.5
501_1
88 years, male
47.3
308_1
70 years, female
45.5
413_1
59 years, female
43.9
466_1
57 years, female
42.1
43_1
64 years, female
41.8
89_1
63 years, male
40.8
149_1
88 years, male
32.6
490_1
67 years, female
32.6
491_1
89 years, female
24.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
