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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Mouse brain, Intensity
Medulla oblongatai

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

61.344
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:349.8 nTPM
FANTOM5:515.5 Scaled Tags Per Million
Allen mouse:5.4 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA000798
Medulla oblongata mean intensity 61.344
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Nucleus of the solitary tract 15.329
Raphe magnus nucleus 24.456
Cochlear nucleus 25.565
Lateral paragigantocellular nucleus 11.197
Raphe pallidus nucleus 38.679
Facial nucleus -
Hypoglossal nucleus 23.350
Ambiguus nucleus 13.012
External cuneate nucleus 14.141
Inferior olivary nucleus 13.594
Raphe obscures nucleus 22.063
Dorsal motor nucleus of vagus 61.344

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

349.8
Sample id Sample description nTPM
Area postrema
nTPM: 180.5
2306 Male, age 80, both hemispheres 301.7
2799 Male, age 61, both hemispheres 143.9
2054 Male, age 76, both hemispheres 95.9
Dorsal medullary reticular nucleus
nTPM: 188.3
2040 Female, age 85, both hemispheres 217.0
2373 Male, age 61, both hemispheres 178.7
2088 Male, age 76, both hemispheres 169.2
Dorsal motor vagal complex
nTPM: 125.8
2185 Male, age 76, both hemispheres 193.5
2000 Male, age 74, unknown 165.6
2133 Female, age 91, both hemispheres 131.7
2807 Female, age 85, both hemispheres 123.9
2813 Female, age 72, unknown 117.9
2643 Male, age 74, both hemispheres 103.6
2844 Male, age 55, unknown 95.1
2797 Male, age 61, both hemispheres 75.1
Gigantocellular reticular nuclei, medullary
nTPM: 219.8
2314 Male, age 61, both hemispheres 390.9
1876 Female, age 85, both hemispheres 252.6
2387 Female, age 91, both hemispheres 226.1
2310 Male, age 80, both hemispheres 187.6
2022 Male, age 76, right hemisphere 131.8
2462 Male, age 74, both hemispheres 129.8
Gigantocellular reticular nuclei, pars
nTPM: 193.1
2336 Male, age 61, both hemispheres 234.5
2330 Male, age 80, both hemispheres 206.3
2706 Male, age 80, both hemispheres 192.2
2084 Female, age 85, both hemispheres 180.9
2168 Male, age 76, both hemispheres 151.3
Inferior olive
nTPM: 283.1
2178 Male, age 61, both hemispheres 383.2
2085 Female, age 85, both hemispheres 294.2
2563 Male, age 74, both hemispheres 275.3
2628 Female, age 91, both hemispheres 240.0
2379 Male, age 80, both hemispheres 222.7
Lateral medullary reticular nucleus
nTPM: 285.0
2305 Male, age 74, both hemispheres 358.9
2852 Male, age 80, both hemispheres 353.8
2374 Male, age 61, both hemispheres 317.7
2190 Female, age 85, both hemispheres 279.2
2804 Female, age 91, both hemispheres 209.1
2044 Male, age 76, both hemispheres 191.2
Medial olivary nucleus
nTPM: 349.8
1943 Male, age 61, both hemispheres 447.8
1962 Male, age 76, both hemispheres 393.3
2138 Female, age 91, both hemispheres 301.1
2851 Male, age 80, both hemispheres 257.1
Medial vestibular nucleus
nTPM: 187.3
2801 Male, age 74, both hemispheres 241.7
2093 Male, age 80, both hemispheres 213.8
2803 Female, age 91, both hemispheres 207.6
2743 Female, age 85, both hemispheres 186.5
2624 Male, age 61, both hemispheres 184.7
2134 Male, age 76, both hemispheres 89.5
Motor hypoglossal nucleus
nTPM: 187.4
2182 Male, age 80, both hemispheres 258.2
2125 Female, age 91, both hemispheres 246.4
2132 Female, age 85, both hemispheres 233.0
2461 Male, age 61, both hemispheres 129.1
2277 Male, age 76, both hemispheres 70.2
Nucleus ambiguus
nTPM: 307.6
2071 Male, age 76, both hemispheres 412.5
2096 Female, age 85, both hemispheres 202.7
Nucleus cuneatus
nTPM: 205.4
2380 Male, age 80, both hemispheres 284.3
2808 Female, age 85, both hemispheres 281.9
2381 Male, age 80, both hemispheres 245.7
2100 Male, age 76, both hemispheres 229.3
2376 Male, age 61, both hemispheres 194.7
2131 Male, age 76, both hemispheres 185.9
2564 Male, age 74, both hemispheres 184.4
2562 Male, age 61, both hemispheres 126.5
2805 Female, age 91, both hemispheres 115.9
Nucleus gracilis
nTPM: 263.3
2382 Male, age 80, both hemispheres 318.5
2627 Male, age 74, both hemispheres 242.0
2299 Female, age 85, both hemispheres 229.3
Nucleus raphe obscurus
nTPM: 341.2
2845 Female, age 85, midline 388.5
2142 Male, age 76, midline 352.1
2800 Male, age 61, midline 283.1
Nucleus raphe pallidus
nTPM: 333.8
2145 Male, age 76, midline 429.9
1924 Male, age 61, midline 337.3
2183 Male, age 80, midline 234.1
Nucleus tractus solitarii
nTPM: 102.9
2191 Female, age 85, both hemispheres 123.1
2307 Male, age 80, both hemispheres 113.9
2144 Female, age 91, right hemisphere 91.2
2656 Male, age 76, both hemispheres 83.3
Parvicellular reticular nuclei
nTPM: 192.5
2119 Male, age 80, both hemispheres 239.3
2095 Male, age 76, both hemispheres 222.7
2558 Male, age 74, both hemispheres 115.6
Parvicellular reticular nuclei, medullary
nTPM: 180.5
2189 Female, age 91, both hemispheres 207.7
2181 Male, age 80, left hemisphere 169.1
2091 Female, age 85, both hemispheres 164.7
Peritrigeminal nucleus
nTPM: 238.9
2067 Female, age 85, both hemispheres 262.2
2179 Male, age 61, both hemispheres 232.6
2136 Male, age 76, both hemispheres 221.8
Prepositus hypoglossal nucleus
nTPM: 207.9
2855 Female, age 85, right hemisphere 254.3
2086 Male, age 80, both hemispheres 161.4
Spinal trigeminal nucleus, caudal
nTPM: 229.7
2312 Male, age 61, both hemispheres 349.4
2308 Male, age 80, both hemispheres 255.7
2447 Male, age 76, both hemispheres 205.5
2390 Female, age 91, both hemispheres 180.4
2642 Male, age 74, both hemispheres 157.4
Spinal trigeminal nucleus, interpolar
nTPM: 156.9
2033 Male, age 80, both hemispheres 184.7
2386 Female, age 85, both hemispheres 176.4
2389 Female, age 91, both hemispheres 168.4
2066 Male, age 76, right hemisphere 144.3
2625 Male, age 61, both hemispheres 110.8
Spinal vestibular nucleus
nTPM: 196.7
2748 Male, age 76, both hemispheres 278.5
2186 Female, age 91, both hemispheres 216.5
2806 Female, age 85, both hemispheres 212.8
2780 Male, age 80, both hemispheres 190.3
2384 Male, age 74, both hemispheres 154.3
2796 Male, age 61, both hemispheres 127.7
Superior vestibular nucleus
nTPM: 192.7
2015 Male, age 80, both hemispheres 205.5
2383 Male, age 74, both hemispheres 188.1
2061 Male, age 76, both hemispheres 184.4
Ventral medullary reticular nucleus
nTPM: 245.4
2372 Male, age 61, both hemispheres 249.3
2060 Male, age 76, both hemispheres 241.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 243.4
2180 Male, age 61, both hemispheres 313.8
2118 Male, age 80, both hemispheres 300.6
2741 Female, age 85, both hemispheres 210.7
2302 Female, age 91, both hemispheres 196.3
1986 Male, age 76, both hemispheres 195.3

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

515.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 515.5
FF:10155-103A2 76 years, female 539.1
FF:10174-103C3 60 years, female 513.6
FF:10038-101F2 18-64 years, mixed 493.7

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.4
532642 Antisense, RP_040810_02_H07, Mouse strain C57BL/6J (56 days, male) 5.4

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