PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		61.344
Mouse brain, Intensity
Ponsi 		38.164
RNA expressioni
HPA Brain:349.8 nTPM
FANTOM5:515.5 Scaled Tags Per Million
Mouse:9.9 nTPM
Allen mouse:5.8 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA000798
Medulla oblongata mean intensity 61.344
intensityi
FRONT BACK
Nucleus of the solitary tract 15.329
Raphe magnus nucleus 24.456
Cochlear nucleus 25.565
Lateral paragigantocellular nucleus 11.197
Raphe pallidus nucleus 38.679
Facial nucleus -
Hypoglossal nucleus 23.350
Ambiguus nucleus 13.012
External cuneate nucleus 14.141
Inferior olivary nucleus 13.594
Raphe obscures nucleus 22.063
Dorsal motor nucleus of vagus 61.344
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 6.273
Parabrachial nucleus 22.685
Principle sensory trigeminal nucleus 10.992
Locus coeruleus 38.164
Pontine nucleus 3.793
Vestibular nucleus 35.673
Pontine reticular nucleus, oral 5.078
Lateral lemniscus 3.763
Superior paraolivary nucleus 17.901

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 349.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 269.9
2301 Female, age 85, both hemispheres 320.8
2188 Female, age 91, both hemispheres 316.7
2090 Male, age 80, both hemispheres 307.2
1984 Male, age 76, both hemispheres 134.8
Area postrema
nTPM: 180.5
2306 Male, age 80, both hemispheres 301.7
2799 Male, age 61, both hemispheres 143.9
2054 Male, age 76, both hemispheres 95.9
Dorsal cochlear nucleus
nTPM: 175.7
2187 Female, age 91, both hemispheres 249.6
2378 Male, age 80, both hemispheres 204.6
2058 Male, age 76, both hemispheres 156.5
2802 Male, age 74, right hemisphere 135.5
2370 Male, age 61, both hemispheres 132.1
Dorsal medullary reticular nucleus
nTPM: 188.3
2040 Female, age 85, both hemispheres 217.0
2373 Male, age 61, both hemispheres 178.7
2088 Male, age 76, both hemispheres 169.2
Dorsal motor vagal complex
nTPM: 125.8
2185 Male, age 76, both hemispheres 193.5
2000 Male, age 74, unknown 165.6
2133 Female, age 91, both hemispheres 131.7
2807 Female, age 85, both hemispheres 123.9
2813 Female, age 72, unknown 117.9
2643 Male, age 74, both hemispheres 103.6
2844 Male, age 55, unknown 95.1
2797 Male, age 61, both hemispheres 75.1
Dorsal tegmental nucleus
nTPM: 169.2
2083 Male, age 80, both hemispheres 248.8
2326 Male, age 74, both hemispheres 187.7
1936 Male, age 76, left hemisphere 145.1
2358 Male, age 61, both hemispheres 94.9
Dorsolateral tegmental area
nTPM: 194.3
2751 Female, age 85, both hemispheres 286.0
2654 Male, age 80, both hemispheres 223.5
2337 Male, age 61, both hemispheres 213.9
2360 Male, age 74, both hemispheres 150.3
2141 Male, age 76, both hemispheres 97.9
Gigantocellular reticular nuclei, medullary
nTPM: 219.8
2314 Male, age 61, both hemispheres 390.9
1876 Female, age 85, both hemispheres 252.6
2387 Female, age 91, both hemispheres 226.1
2310 Male, age 80, both hemispheres 187.6
2022 Male, age 76, right hemisphere 131.8
2462 Male, age 74, both hemispheres 129.8
Gigantocellular reticular nuclei, pars
nTPM: 193.1
2336 Male, age 61, both hemispheres 234.5
2330 Male, age 80, both hemispheres 206.3
2706 Male, age 80, both hemispheres 192.2
2084 Female, age 85, both hemispheres 180.9
2168 Male, age 76, both hemispheres 151.3
Inferior olive
nTPM: 283.1
2178 Male, age 61, both hemispheres 383.2
2085 Female, age 85, both hemispheres 294.2
2563 Male, age 74, both hemispheres 275.3
2628 Female, age 91, both hemispheres 240.0
2379 Male, age 80, both hemispheres 222.7
Kolliker-Fuse nucleus
nTPM: 218.6
2793 Female, age 91, left hemisphere 304.6
2163 Male, age 80, both hemispheres 177.6
2315 Male, age 76, right hemisphere 173.6
Lateral lemniscal nuclei
nTPM: 194.3
2320 Female, age 91, left hemisphere 262.4
2746 Female, age 85, left hemisphere 232.0
2169 Male, age 76, both hemispheres 183.2
2036 Male, age 80, both hemispheres 147.1
2453 Male, age 74, right hemisphere 146.6
Lateral medullary reticular nucleus
nTPM: 285.0
2305 Male, age 74, both hemispheres 358.9
2852 Male, age 80, both hemispheres 353.8
2374 Male, age 61, both hemispheres 317.7
2190 Female, age 85, both hemispheres 279.2
2804 Female, age 91, both hemispheres 209.1
2044 Male, age 76, both hemispheres 191.2
Lateral parabrachial nucleus
nTPM: 227.7
2792 Male, age 76, both hemispheres 354.3
2013 Male, age 80, both hemispheres 246.7
2139 Female, age 85, right hemisphere 196.4
2790 Male, age 61, both hemispheres 113.4
Lateral vestibular nucleus
nTPM: 191.5
2311 Male, age 80, both hemispheres 232.6
2184 Male, age 76, both hemispheres 150.5
Locus coeruleus
nTPM: 101.8
2317 Female, age 72, unknown 131.1
2162 Male, age 80, both hemispheres 124.2
2720 Male, age 74, both hemispheres 109.5
2123 Female, age 91, both hemispheres 107.6
2788 Male, age 74, unknown 88.5
2014 Male, age 55, unknown 84.2
1980 Male, age 76, both hemispheres 67.5
Medial olivary nucleus
nTPM: 349.8
1943 Male, age 61, both hemispheres 447.8
1962 Male, age 76, both hemispheres 393.3
2138 Female, age 91, both hemispheres 301.1
2851 Male, age 80, both hemispheres 257.1
Medial parabrachial nucleus
nTPM: 199.4
2170 Female, age 91, both hemispheres 270.6
2463 Female, age 85, right hemisphere 237.9
2854 Male, age 80, both hemispheres 203.6
2786 Male, age 76, both hemispheres 178.9
2156 Male, age 61, both hemispheres 106.2
Medial periolivary nuclei
nTPM: 200.7
2081 Male, age 80, both hemispheres 262.5
2791 Male, age 74, right hemisphere 252.0
2458 Female, age 91, both hemispheres 193.9
2063 Male, age 76, both hemispheres 184.3
2171 Female, age 85, both hemispheres 111.1
Medial vestibular nucleus
nTPM: 187.3
2801 Male, age 74, both hemispheres 241.7
2093 Male, age 80, both hemispheres 213.8
2803 Female, age 91, both hemispheres 207.6
2743 Female, age 85, both hemispheres 186.5
2624 Male, age 61, both hemispheres 184.7
2134 Male, age 76, both hemispheres 89.5
Motor facial nucleus
nTPM: 202.1
2126 Male, age 61, both hemispheres 278.3
2365 Male, age 74, right hemisphere 248.3
2697 Female, age 85, both hemispheres 234.7
2062 Male, age 76, both hemispheres 156.6
2327 Male, age 80, both hemispheres 153.1
2795 Female, age 91, both hemispheres 141.9
Motor hypoglossal nucleus
nTPM: 187.4
2182 Male, age 80, both hemispheres 258.2
2125 Female, age 91, both hemispheres 246.4
2132 Female, age 85, both hemispheres 233.0
2461 Male, age 61, both hemispheres 129.1
2277 Male, age 76, both hemispheres 70.2
Motor trigeminal nucleus
nTPM: 195.9
2321 Female, age 91, both hemispheres 235.1
2560 Male, age 74, both hemispheres 215.9
2079 Male, age 80, both hemispheres 190.5
2309 Male, age 76, both hemispheres 184.7
2335 Male, age 61, both hemispheres 153.4
Nuclei of the trapezoid body
nTPM: 174.4
2166 Male, age 80, both hemispheres 221.4
2159 Male, age 61, both hemispheres 191.3
1983 Male, age 76, both hemispheres 182.8
2368 Female, age 91, both hemispheres 175.8
2735 Female, age 85, both hemispheres 100.6
Nucleus ambiguus
nTPM: 307.6
2071 Male, age 76, both hemispheres 412.5
2096 Female, age 85, both hemispheres 202.7
Nucleus cuneatus
nTPM: 205.4
2380 Male, age 80, both hemispheres 284.3
2808 Female, age 85, both hemispheres 281.9
2381 Male, age 80, both hemispheres 245.7
2100 Male, age 76, both hemispheres 229.3
2376 Male, age 61, both hemispheres 194.7
2131 Male, age 76, both hemispheres 185.9
2564 Male, age 74, both hemispheres 184.4
2562 Male, age 61, both hemispheres 126.5
2805 Female, age 91, both hemispheres 115.9
Nucleus gracilis
nTPM: 263.3
2382 Male, age 80, both hemispheres 318.5
2627 Male, age 74, both hemispheres 242.0
2299 Female, age 85, both hemispheres 229.3
Nucleus raphe magnus
nTPM: 164.7
2328 Male, age 80, both hemispheres 211.5
2051 Male, age 76, both hemispheres 206.5
2459 Female, age 91, both hemispheres 197.1
2455 Male, age 74, both hemispheres 182.1
2160 Male, age 61, both hemispheres 118.9
2172 Female, age 85, both hemispheres 72.1
Nucleus raphe obscurus
nTPM: 341.2
2845 Female, age 85, midline 388.5
2142 Male, age 76, midline 352.1
2800 Male, age 61, midline 283.1
Nucleus raphe pallidus
nTPM: 333.8
2145 Male, age 76, midline 429.9
1924 Male, age 61, midline 337.3
2183 Male, age 80, midline 234.1
Nucleus tractus solitarii
nTPM: 102.9
2191 Female, age 85, both hemispheres 123.1
2307 Male, age 80, both hemispheres 113.9
2144 Female, age 91, right hemisphere 91.2
2656 Male, age 76, both hemispheres 83.3
Paramedian reticular nucleus
nTPM: 184.4
2057 Male, age 80, both hemispheres 226.2
2052 Male, age 76, both hemispheres 186.7
2050 Female, age 85, both hemispheres 174.8
2313 Male, age 61, both hemispheres 150.0
Parvicellular reticular nuclei
nTPM: 192.5
2119 Male, age 80, both hemispheres 239.3
2095 Male, age 76, both hemispheres 222.7
2558 Male, age 74, both hemispheres 115.6
Parvicellular reticular nuclei, medullary
nTPM: 180.5
2189 Female, age 91, both hemispheres 207.7
2181 Male, age 80, left hemisphere 169.1
2091 Female, age 85, both hemispheres 164.7
Pedunculopontine tegmental nucleus
nTPM: 175.9
2334 Male, age 80, both hemispheres 187.0
2338 Male, age 61, both hemispheres 181.0
1921 Female, age 85, both hemispheres 159.6
Peritrigeminal nucleus
nTPM: 238.9
2067 Female, age 85, both hemispheres 262.2
2179 Male, age 61, both hemispheres 232.6
2136 Male, age 76, both hemispheres 221.8
Pontine nuclei
nTPM: 231.2
2454 Male, age 74, left hemisphere 350.5
2319 Female, age 91, both hemispheres 294.3
2109 Female, age 72, unknown 264.7
2115 Male, age 80, left hemisphere 233.8
1968 Male, age 76, left hemisphere 221.9
2727 Male, age 61, right hemisphere 176.9
1863 Male, age 55, unknown 172.1
2787 Female, age 85, both hemispheres 135.3
Pontine raphe nucleus
nTPM: 136.1
2122 Female, age 85, midline 146.7
2853 Male, age 76, midline 125.4
Posteroventral cochlear nucleus
nTPM: 241.0
2135 Female, age 91, both hemispheres 363.6
2341 Male, age 80, both hemispheres 280.8
2070 Male, age 76, both hemispheres 257.9
2752 Female, age 85, both hemispheres 154.4
2371 Male, age 61, both hemispheres 148.1
Prepositus hypoglossal nucleus
nTPM: 207.9
2855 Female, age 85, right hemisphere 254.3
2086 Male, age 80, both hemispheres 161.4
Principal sensory trigeminal nucleus
nTPM: 176.0
2367 Female, age 91, left hemisphere 270.1
2008 Male, age 80, left hemisphere 153.9
2324 Male, age 76, both hemispheres 150.1
2158 Male, age 61, both hemispheres 129.8
Reticular pontine nucleus, caudal
nTPM: 228.5
2559 Male, age 74, both hemispheres 270.1
2092 Male, age 76, both hemispheres 261.1
2457 Female, age 91, both hemispheres 238.0
2332 Male, age 80, right hemisphere 144.8
Reticular pontine nucleus, oral
nTPM: 253.6
2361 Male, age 74, both hemispheres 323.0
2366 Female, age 91, both hemispheres 310.8
1939 Male, age 80, both hemispheres 218.3
2012 Female, age 85, both hemispheres 212.0
2167 Male, age 76, both hemispheres 203.8
Reticulotegmental nucleus
nTPM: 157.6
2322 Female, age 91, both hemispheres 200.1
2333 Male, age 80, both hemispheres 184.6
2452 Male, age 74, both hemispheres 154.4
2325 Male, age 76, both hemispheres 91.4
Spinal trigeminal nucleus, caudal
nTPM: 229.7
2312 Male, age 61, both hemispheres 349.4
2308 Male, age 80, both hemispheres 255.7
2447 Male, age 76, both hemispheres 205.5
2390 Female, age 91, both hemispheres 180.4
2642 Male, age 74, both hemispheres 157.4
Spinal trigeminal nucleus, interpolar
nTPM: 156.9
2033 Male, age 80, both hemispheres 184.7
2386 Female, age 85, both hemispheres 176.4
2389 Female, age 91, both hemispheres 168.4
2066 Male, age 76, right hemisphere 144.3
2625 Male, age 61, both hemispheres 110.8
Spinal trigeminal nucleus, oral
nTPM: 170.1
1978 Male, age 76, both hemispheres 194.3
2164 Male, age 80, both hemispheres 180.6
2737 Female, age 85, both hemispheres 135.5
Spinal vestibular nucleus
nTPM: 196.7
2748 Male, age 76, both hemispheres 278.5
2186 Female, age 91, both hemispheres 216.5
2806 Female, age 85, both hemispheres 212.8
2780 Male, age 80, both hemispheres 190.3
2384 Male, age 74, both hemispheres 154.3
2796 Male, age 61, both hemispheres 127.7
Subcoeruleus area
nTPM: 185.3
2369 Female, age 85, left hemisphere 312.9
2089 Male, age 76, left hemisphere 200.6
1958 Male, age 80, both hemispheres 175.4
2323 Female, age 91, left hemisphere 133.9
2451 Male, age 74, both hemispheres 103.9
Superior olive
nTPM: 224.4
2020 Male, age 76, both hemispheres 282.5
2364 Male, age 74, right hemisphere 277.8
2329 Male, age 80, right hemisphere 218.7
2561 Female, age 91, both hemispheres 176.3
1875 Female, age 85, both hemispheres 166.5
Superior vestibular nucleus
nTPM: 192.7
2015 Male, age 80, both hemispheres 205.5
2383 Male, age 74, both hemispheres 188.1
2061 Male, age 76, both hemispheres 184.4
Ventral medullary reticular nucleus
nTPM: 245.4
2372 Male, age 61, both hemispheres 249.3
2060 Male, age 76, both hemispheres 241.5
Ventral periolivary nuclei
nTPM: 185.1
2023 Male, age 76, both hemispheres 291.9
2165 Male, age 80, both hemispheres 179.0
2130 Female, age 85, both hemispheres 139.2
2794 Female, age 91, left hemisphere 130.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 243.4
2180 Male, age 61, both hemispheres 313.8
2118 Male, age 80, both hemispheres 300.6
2741 Female, age 85, both hemispheres 210.7
2302 Female, age 91, both hemispheres 196.3
1986 Male, age 76, both hemispheres 195.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 211.5
2359 Male, age 61, both hemispheres 229.9
1959 Male, age 76, both hemispheres 228.6
2840 Female, age 85, both hemispheres 209.9
2456 Female, age 91, both hemispheres 206.9
2161 Male, age 80, both hemispheres 201.7
2449 Male, age 74, both hemispheres 192.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 515.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 433.2
FF:10165-103B3 76 years, female 499.9
FF:10182-103D2 60 years, female 366.5
Medulla oblongata
Scaled Tags Per Million: 515.5
FF:10155-103A2 76 years, female 539.1
FF:10174-103C3 60 years, female 513.6
FF:10038-101F2 18-64 years, mixed 493.7
Pons
Scaled Tags Per Million: 369.2
FF:10033-101E6 18-54 years, mixed 369.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 9.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 9.9
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.8
Sample A Male 10.3
Sample B Male 9.0
Sample C Female 11.3
Sample D Female 8.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.4
532642 Antisense, RP_040810_02_H07, Mouse strain C57BL/6J (56 days, male) 5.4
Pons
Expression energy: 5.8
532642 Antisense, RP_040810_02_H07, Mouse strain C57BL/6J (56 days, male) 5.8

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