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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:137.8 nTPM
HPA Brain:294.9 nTPM
GTEx:137.8 nTPM
FANTOM5:176.7 Scaled Tags Per Million
Pig:61.1 nTPM
Mouse:48.7 nTPM
Allen mouse:7.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013713Antibody HPA068064
Glial cells LowNot detected
Neuronal cells MediumNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

294.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 191.0
2481 Female, age 94, left hemisphere 224.8
2289 Male, age 61, right hemisphere 218.4
1854 Male, age 80, left hemisphere 210.6
1857 Female, age 85, left hemisphere 185.6
1781 Male, age 74, unknown 182.3
2290 Female, age 72, unknown 172.4
2288 Male, age 75, left hemisphere 171.3
2846 Female, age 79, unknown 162.5
Globus pallidus, externus
nTPM: 294.9
2567 Female, age 72, unknown 403.4
2646 Male, age 61, right hemisphere 356.8
1996 Male, age 80, right hemisphere 281.1
2772 Female, age 79, unknown 222.3
2395 Male, age 75, both hemispheres 211.1
Globus pallidus, internus
nTPM: 268.3
2566 Female, age 72, unknown 337.9
2111 Female, age 85, right hemisphere 289.2
2037 Male, age 80, right hemisphere 287.7
2778 Female, age 91, both hemispheres 253.1
2483 Female, age 94, right hemisphere 250.8
1818 Male, age 74, unknown 243.5
2287 Male, age 75, right hemisphere 215.8
Nucleus accumbens
nTPM: 185.0
2391 Female, age 94, left hemisphere 226.2
2732 Male, age 80, right hemisphere 219.4
2698 Female, age 72, unknown 193.8
2824 Male, age 61, right hemisphere 184.4
1806 Female, age 85, left hemisphere 182.9
1783 Male, age 74, unknown 168.7
2286 Male, age 75, left hemisphere 157.8
1856 Female, age 91, right hemisphere 146.5
Nucleus basalis of Meynert
nTPM: 242.9
2569 Male, age 61, both hemispheres 367.4
2393 Male, age 80, right hemisphere 214.3
2484 Female, age 94, left hemisphere 203.1
2821 Male, age 75, both hemispheres 186.7
Nucleus of the diagonal band
nTPM: 176.9
1979 Male, age 74, unknown 193.7
2775 Male, age 80, right hemisphere 187.4
2195 Female, age 85, both hemispheres 179.7
2029 Male, age 61, right hemisphere 177.7
1812 Female, age 91, both hemispheres 145.8
Putamen
nTPM: 213.8
2647 Male, age 75, left hemisphere 297.3
2489 Female, age 72, unknown 259.4
2482 Female, age 94, left hemisphere 228.1
1829 Male, age 74, unknown 202.8
1838 Male, age 80, right hemisphere 187.0
2466 Female, age 79, unknown 161.8
1937 Female, age 91, right hemisphere 160.2
Septal nuclei
nTPM: 192.6
2199 Male, age 80, right hemisphere 254.0
2394 Male, age 61, left hemisphere 236.2
2059 Female, age 85, both hemispheres 206.6
1960 Male, age 74, unknown 179.1
2629 Female, age 94, right hemisphere 165.2
2009 Female, age 91, both hemispheres 161.4
2031 Female, age 72, unknown 145.9
Stria terminalis, bed nucleus
nTPM: 189.1
2201 Male, age 74, unknown 222.9
1974 Female, age 91, both hemispheres 174.3
2486 Female, age 94, both hemispheres 170.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.6
Samples: 246

Max nTPM: 296.5
Min nTPM: 47.1
Std nTPM: 42.4
Median nTPM: 123.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 296.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 286.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 272.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 267.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 245.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 238.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 237.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 236.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 235.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 221.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 219.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 217.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 215.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 211.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 210.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 207.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 201.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 196.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 195.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 193.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 190.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 189.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 187.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 187.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 186.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 185.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 184.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 184.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 182.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 182.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 182.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 181.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 181.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 181.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 178.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 175.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 174.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 173.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 173.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 173.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 170.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 168.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 168.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 168.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 167.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 167.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 167.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 166.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 164.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 164.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 162.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 162.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 162.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 161.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 161.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 161.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 160.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 159.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 159.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 157.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 157.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 157.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 155.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 155.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 155.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 155.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 154.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 153.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 153.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 153.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 153.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 152.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 151.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 150.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 150.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 148.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 147.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 146.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 146.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 145.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 145.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 144.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 144.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 143.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 143.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 142.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 141.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 141.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 141.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 141.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 141.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 141.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 140.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 140.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 139.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 139.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 138.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 138.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 137.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 137.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 134.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 133.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 132.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 131.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 130.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 130.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 129.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 127.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 127.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 127.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 126.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 125.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 125.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 125.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 125.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 124.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 124.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 123.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 122.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 122.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 122.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 122.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 121.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 121.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 121.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 121.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 120.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 120.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 120.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 120.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 120.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 119.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 119.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 118.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 118.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 118.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 117.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 117.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 117.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 117.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 116.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 116.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 116.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 115.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 115.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 115.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 114.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 114.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 112.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 112.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 112.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 112.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 112.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 112.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 112.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 112.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 112.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 110.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 110.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 110.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 109.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 109.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 109.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 107.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 107.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 106.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 106.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 106.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 105.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 105.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 105.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 104.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 104.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 104.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 104.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 104.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 103.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 103.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 103.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 102.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 102.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 102.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 101.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 101.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 100.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 98.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 98.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 97.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 97.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 97.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 97.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 96.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 96.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 95.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 94.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 93.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 93.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 92.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 92.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 92.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 92.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 91.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 89.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 88.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 88.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 88.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 88.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 87.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 87.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 87.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 86.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 85.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 85.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 80.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 80.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 79.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 79.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 76.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 74.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 74.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 71.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 61.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 60.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 57.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 56.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 54.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 51.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 47.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 132.2
Samples: 246

Max nTPM: 296.0
Min nTPM: 58.8
Std nTPM: 45.8
Median nTPM: 118.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 296.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 284.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 280.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 278.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 275.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 272.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 261.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 249.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 243.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 241.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 239.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 234.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 233.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 230.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 229.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 223.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 223.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 211.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 210.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 209.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 205.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 204.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 197.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 197.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 197.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 196.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 194.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 192.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 191.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 191.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 189.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 189.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 188.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 186.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 184.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 182.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 181.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 180.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 180.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 177.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 177.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 171.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 167.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 166.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 164.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 162.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 162.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 161.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 160.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 160.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 159.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 158.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 158.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 157.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 156.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 156.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 155.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 155.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 153.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 153.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 152.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 151.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 151.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 149.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 148.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 147.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 147.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 147.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 146.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 144.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 144.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 143.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 142.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 142.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 141.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 141.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 140.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 140.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 140.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 138.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 137.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 136.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 135.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 135.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 134.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 134.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 134.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 133.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 133.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 132.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 131.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 131.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 130.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 130.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 129.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 128.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 128.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 128.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 127.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 127.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 126.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 126.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 125.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 125.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 124.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 124.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 123.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 123.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 123.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 123.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 122.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 122.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 121.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 121.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 121.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 120.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 120.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 120.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 119.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 119.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 119.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 119.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 119.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 117.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 117.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 117.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 116.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 116.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 116.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 116.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 115.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 114.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 114.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 114.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 113.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 113.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 113.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 113.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 112.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 112.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 112.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 111.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 111.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 111.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 111.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 110.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 109.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 109.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 109.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 109.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 108.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 108.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 108.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 108.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 106.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 106.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 106.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 106.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 106.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 105.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 105.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 105.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 105.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 105.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 105.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 105.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 104.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 104.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 104.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 104.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 104.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 104.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 104.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 103.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 103.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 103.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 102.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 102.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 102.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 102.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 102.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 102.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 102.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 102.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 102.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 101.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 101.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 101.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 101.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 101.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 100.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 99.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 99.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 99.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 99.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 98.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 98.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 98.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 98.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 98.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 97.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 97.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 96.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 96.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 96.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 95.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 94.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 94.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 94.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 94.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 94.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 93.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 93.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 93.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 92.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 92.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 92.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 91.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 91.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 90.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 90.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 88.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 88.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 88.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 87.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 87.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 87.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 86.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 84.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 84.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 84.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 83.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 83.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 82.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 82.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 80.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 79.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 79.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 79.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 79.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 78.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 78.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 70.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 61.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 58.8
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Brain - Putamen (basal ganglia)
Average nTPM: 137.8
Samples: 205

Max nTPM: 306.1
Min nTPM: 60.5
Std nTPM: 41.7
Median nTPM: 130.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 306.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 259.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 257.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 252.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 236.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 233.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 229.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 226.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 224.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 222.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 220.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 216.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 212.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 212.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 211.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 209.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 208.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 205.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 204.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 204.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 203.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 203.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 200.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 198.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 194.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 194.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 192.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 189.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 189.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 188.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 186.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 183.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 181.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 180.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 174.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 172.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 171.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 170.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 168.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 168.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 167.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 166.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 166.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 164.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 163.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 163.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 161.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 161.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 160.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 159.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 159.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 157.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 156.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 155.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 154.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 152.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 152.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 151.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 151.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 151.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 150.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 149.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 149.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 148.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 147.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 147.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 147.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 147.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 145.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 145.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 144.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 143.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 142.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 141.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 140.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 140.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 139.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 139.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 139.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 139.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 139.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 138.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 137.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 137.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 137.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 136.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 135.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 135.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 134.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 133.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 133.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 133.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 133.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 133.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 132.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 132.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 132.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 132.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 132.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 132.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 131.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 130.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 130.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 129.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 129.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 129.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 129.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 128.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 128.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 127.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 127.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 126.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 124.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 123.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 123.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 123.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 122.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 122.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 122.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 122.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 122.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 122.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 121.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 120.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 120.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 119.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 119.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 119.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 119.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 118.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 118.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 116.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 116.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 115.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 114.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 113.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 113.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 113.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 113.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 111.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 110.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 109.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 109.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 109.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 108.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 108.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 108.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 108.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 108.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 108.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 108.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 107.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 106.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 105.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 105.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 105.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 104.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 103.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 102.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 102.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 102.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 102.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 101.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 101.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 101.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 100.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 100.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 99.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 99.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 99.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 99.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 98.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 98.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 97.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 97.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 97.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 96.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 96.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 95.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 95.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 94.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 94.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 94.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 93.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 93.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 91.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 90.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 90.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 89.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 89.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 88.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 88.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 86.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 86.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 86.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 84.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 83.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 82.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 81.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 77.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 76.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 73.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

176.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 149.6
FF:10164-103B2 76 years, female 149.6
Nucleus accumbens
Scaled Tags Per Million: 121.6
FF:10037-101F1 23-56 years, mixed 121.6
Putamen
Scaled Tags Per Million: 122.2
FF:10176-103C5 60 years, female 122.2
Globus pallidus
Scaled Tags Per Million: 176.7
FF:10161-103A8 76 years, female 201.1
FF:10175-103C4 60 years, female 152.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.1
Pig sample Sample description nTPM
Caudate
nTPM: 55.2
Samples: 4

Max nTPM: 59.4
Min nTPM: 48.5
Sample A Female 48.5
Sample B Female 55.0
Sample C Male 58.0
Sample D Male 59.4
Putamen
nTPM: 61.1
Samples: 4

Max nTPM: 63.6
Min nTPM: 58.3
Sample A Female 58.9
Sample B Female 58.3
Sample C Male 63.6
Sample D Male 63.6
Septum
nTPM: 54.2
Samples: 4

Max nTPM: 61.4
Min nTPM: 47.4
Sample A Female 47.4
Sample B Female 48.6
Sample C Male 61.4
Sample D Male 59.2
Ventral pallidum
nTPM: 57.6
Samples: 4

Max nTPM: 66.3
Min nTPM: 50.0
Sample A Female 52.5
Sample B Female 50.0
Sample C Male 66.3
Sample D Male 61.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 47.2
Samples: 4

Max nTPM: 53.5
Min nTPM: 43.0
Sample A Male 47.5
Sample B Male 44.6
Sample C Female 53.5
Sample D Female 43.0
Septum
nTPM: 46.3
Samples: 4

Max nTPM: 59.0
Min nTPM: 37.0
Sample A Male 59.0
Sample B Male 37.0
Sample C Female 39.0
Sample D Female 50.0
Ventral forebrain
nTPM: 48.7
Samples: 4

Max nTPM: 55.1
Min nTPM: 37.1
Sample A Male 53.6
Sample B Male 55.1
Sample C Female 37.1
Sample D Female 49.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.0
69736400 Antisense, RP_050503_04_G01, Mouse strain C57BL/6J (56 days, male) 7.0
Pallidum
Expression energy: 7.6
69736400 Antisense, RP_050503_04_G01, Mouse strain C57BL/6J (56 days, male) 7.6

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