PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:288.5 nTPM
FANTOM5:183.7 Scaled Tags Per Million
Pig:66.6 nTPM
Mouse:48.0 nTPM
Allen mouse:6.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 288.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 227.4
2188 Female, age 91, both hemispheres 239.6
2090 Male, age 80, both hemispheres 229.9
2301 Female, age 85, both hemispheres 223.1
1984 Male, age 76, both hemispheres 217.0
Area postrema
nTPM: 288.5
2799 Male, age 61, both hemispheres 313.6
2054 Male, age 76, both hemispheres 306.2
2306 Male, age 80, both hemispheres 245.7
Dorsal cochlear nucleus
nTPM: 236.3
2058 Male, age 76, both hemispheres 272.1
2187 Female, age 91, both hemispheres 247.3
2378 Male, age 80, both hemispheres 230.0
2802 Male, age 74, right hemisphere 224.2
2370 Male, age 61, both hemispheres 207.9
Dorsal medullary reticular nucleus
nTPM: 238.4
2088 Male, age 76, both hemispheres 256.8
2040 Female, age 85, both hemispheres 232.1
2373 Male, age 61, both hemispheres 226.5
Dorsal motor vagal complex
nTPM: 239.5
2185 Male, age 76, both hemispheres 301.6
2807 Female, age 85, both hemispheres 238.6
2643 Male, age 74, both hemispheres 233.1
2813 Female, age 72, unknown 232.6
2797 Male, age 61, both hemispheres 230.8
2133 Female, age 91, both hemispheres 229.3
2000 Male, age 74, unknown 227.6
2844 Male, age 55, unknown 222.8
Dorsal tegmental nucleus
nTPM: 241.9
1936 Male, age 76, left hemisphere 259.9
2083 Male, age 80, both hemispheres 255.4
2326 Male, age 74, both hemispheres 231.1
2358 Male, age 61, both hemispheres 221.1
Dorsolateral tegmental area
nTPM: 237.6
2654 Male, age 80, both hemispheres 255.5
2337 Male, age 61, both hemispheres 252.8
2141 Male, age 76, both hemispheres 240.3
2751 Female, age 85, both hemispheres 237.4
2360 Male, age 74, both hemispheres 202.2
Gigantocellular reticular nuclei, medullary
nTPM: 228.4
2387 Female, age 91, both hemispheres 284.1
2314 Male, age 61, both hemispheres 255.1
1876 Female, age 85, both hemispheres 245.0
2022 Male, age 76, right hemisphere 216.0
2310 Male, age 80, both hemispheres 189.6
2462 Male, age 74, both hemispheres 180.8
Gigantocellular reticular nuclei, pars
nTPM: 238.6
2084 Female, age 85, both hemispheres 256.5
2336 Male, age 61, both hemispheres 236.9
2706 Male, age 80, both hemispheres 236.3
2330 Male, age 80, both hemispheres 233.2
2168 Male, age 76, both hemispheres 230.3
Inferior olive
nTPM: 274.4
2628 Female, age 91, both hemispheres 304.0
2379 Male, age 80, both hemispheres 289.9
2563 Male, age 74, both hemispheres 263.9
2178 Male, age 61, both hemispheres 263.5
2085 Female, age 85, both hemispheres 250.7
Kolliker-Fuse nucleus
nTPM: 266.3
2315 Male, age 76, right hemisphere 297.8
2793 Female, age 91, left hemisphere 257.6
2163 Male, age 80, both hemispheres 243.6
Lateral lemniscal nuclei
nTPM: 216.7
2320 Female, age 91, left hemisphere 240.9
2453 Male, age 74, right hemisphere 230.4
2169 Male, age 76, both hemispheres 225.9
2746 Female, age 85, left hemisphere 196.2
2036 Male, age 80, both hemispheres 190.1
Lateral medullary reticular nucleus
nTPM: 250.5
2804 Female, age 91, both hemispheres 295.5
2374 Male, age 61, both hemispheres 265.8
2044 Male, age 76, both hemispheres 247.9
2852 Male, age 80, both hemispheres 245.6
2190 Female, age 85, both hemispheres 227.1
2305 Male, age 74, both hemispheres 220.7
Lateral parabrachial nucleus
nTPM: 231.7
2792 Male, age 76, both hemispheres 267.1
2139 Female, age 85, right hemisphere 230.3
2013 Male, age 80, both hemispheres 217.2
2790 Male, age 61, both hemispheres 212.1
Lateral vestibular nucleus
nTPM: 261.9
2184 Male, age 76, both hemispheres 289.2
2311 Male, age 80, both hemispheres 234.5
Locus coeruleus
nTPM: 219.2
1980 Male, age 76, both hemispheres 243.6
2788 Male, age 74, unknown 236.7
2014 Male, age 55, unknown 220.1
2317 Female, age 72, unknown 211.7
2123 Female, age 91, both hemispheres 210.9
2162 Male, age 80, both hemispheres 206.0
2720 Male, age 74, both hemispheres 205.6
Medial olivary nucleus
nTPM: 259.7
2138 Female, age 91, both hemispheres 274.5
2851 Male, age 80, both hemispheres 259.9
1943 Male, age 61, both hemispheres 257.5
1962 Male, age 76, both hemispheres 247.1
Medial parabrachial nucleus
nTPM: 243.8
2786 Male, age 76, both hemispheres 271.0
2156 Male, age 61, both hemispheres 246.4
2170 Female, age 91, both hemispheres 244.6
2463 Female, age 85, right hemisphere 235.5
2854 Male, age 80, both hemispheres 221.4
Medial periolivary nuclei
nTPM: 223.9
2458 Female, age 91, both hemispheres 263.7
2171 Female, age 85, both hemispheres 223.3
2081 Male, age 80, both hemispheres 218.3
2063 Male, age 76, both hemispheres 215.9
2791 Male, age 74, right hemisphere 198.2
Medial vestibular nucleus
nTPM: 246.4
2134 Male, age 76, both hemispheres 276.9
2624 Male, age 61, both hemispheres 255.4
2803 Female, age 91, both hemispheres 249.7
2093 Male, age 80, both hemispheres 245.0
2801 Male, age 74, both hemispheres 238.3
2743 Female, age 85, both hemispheres 213.4
Motor facial nucleus
nTPM: 225.7
2795 Female, age 91, both hemispheres 305.7
2062 Male, age 76, both hemispheres 223.8
2126 Male, age 61, both hemispheres 217.2
2697 Female, age 85, both hemispheres 210.0
2365 Male, age 74, right hemisphere 208.0
2327 Male, age 80, both hemispheres 189.5
Motor hypoglossal nucleus
nTPM: 238.7
2277 Male, age 76, both hemispheres 272.8
2125 Female, age 91, both hemispheres 246.9
2461 Male, age 61, both hemispheres 233.3
2182 Male, age 80, both hemispheres 220.7
2132 Female, age 85, both hemispheres 219.6
Motor trigeminal nucleus
nTPM: 238.4
2309 Male, age 76, both hemispheres 274.7
2321 Female, age 91, both hemispheres 268.0
2560 Male, age 74, both hemispheres 222.3
2335 Male, age 61, both hemispheres 217.0
2079 Male, age 80, both hemispheres 210.0
Nuclei of the trapezoid body
nTPM: 221.0
2368 Female, age 91, both hemispheres 274.6
2166 Male, age 80, both hemispheres 221.7
1983 Male, age 76, both hemispheres 208.2
2735 Female, age 85, both hemispheres 205.6
2159 Male, age 61, both hemispheres 194.9
Nucleus ambiguus
nTPM: 262.7
2071 Male, age 76, both hemispheres 297.5
2096 Female, age 85, both hemispheres 227.9
Nucleus cuneatus
nTPM: 259.7
2805 Female, age 91, both hemispheres 337.3
2100 Male, age 76, both hemispheres 316.0
2131 Male, age 76, both hemispheres 271.3
2564 Male, age 74, both hemispheres 250.0
2808 Female, age 85, both hemispheres 250.0
2380 Male, age 80, both hemispheres 249.4
2381 Male, age 80, both hemispheres 234.7
2376 Male, age 61, both hemispheres 218.8
2562 Male, age 61, both hemispheres 209.8
Nucleus gracilis
nTPM: 249.5
2299 Female, age 85, both hemispheres 255.5
2382 Male, age 80, both hemispheres 253.4
2627 Male, age 74, both hemispheres 239.6
Nucleus raphe magnus
nTPM: 211.2
2459 Female, age 91, both hemispheres 237.8
2455 Male, age 74, both hemispheres 219.6
2051 Male, age 76, both hemispheres 219.1
2328 Male, age 80, both hemispheres 214.6
2172 Female, age 85, both hemispheres 195.0
2160 Male, age 61, both hemispheres 180.9
Nucleus raphe obscurus
nTPM: 260.1
2142 Male, age 76, midline 308.0
2800 Male, age 61, midline 239.2
2845 Female, age 85, midline 233.0
Nucleus raphe pallidus
nTPM: 254.3
2145 Male, age 76, midline 261.2
1924 Male, age 61, midline 255.6
2183 Male, age 80, midline 246.1
Nucleus tractus solitarii
nTPM: 212.6
2656 Male, age 76, both hemispheres 242.0
2191 Female, age 85, both hemispheres 217.2
2144 Female, age 91, right hemisphere 206.5
2307 Male, age 80, both hemispheres 184.7
Paramedian reticular nucleus
nTPM: 231.5
2052 Male, age 76, both hemispheres 262.3
2057 Male, age 80, both hemispheres 242.7
2050 Female, age 85, both hemispheres 214.0
2313 Male, age 61, both hemispheres 207.0
Parvicellular reticular nuclei
nTPM: 255.5
2095 Male, age 76, both hemispheres 266.6
2119 Male, age 80, both hemispheres 259.5
2558 Male, age 74, both hemispheres 240.5
Parvicellular reticular nuclei, medullary
nTPM: 228.8
2189 Female, age 91, both hemispheres 247.1
2091 Female, age 85, both hemispheres 233.4
2181 Male, age 80, left hemisphere 205.9
Pedunculopontine tegmental nucleus
nTPM: 229.1
2334 Male, age 80, both hemispheres 235.9
2338 Male, age 61, both hemispheres 233.5
1921 Female, age 85, both hemispheres 217.9
Peritrigeminal nucleus
nTPM: 246.4
2136 Male, age 76, both hemispheres 281.5
2067 Female, age 85, both hemispheres 231.2
2179 Male, age 61, both hemispheres 226.4
Pontine nuclei
nTPM: 214.0
1863 Male, age 55, unknown 241.1
2115 Male, age 80, left hemisphere 224.3
2319 Female, age 91, both hemispheres 223.1
2109 Female, age 72, unknown 216.8
2787 Female, age 85, both hemispheres 211.6
1968 Male, age 76, left hemisphere 208.8
2454 Male, age 74, left hemisphere 208.2
2727 Male, age 61, right hemisphere 178.2
Pontine raphe nucleus
nTPM: 223.4
2853 Male, age 76, midline 248.6
2122 Female, age 85, midline 198.3
Posteroventral cochlear nucleus
nTPM: 229.6
2135 Female, age 91, both hemispheres 242.6
2341 Male, age 80, both hemispheres 242.1
2070 Male, age 76, both hemispheres 236.4
2752 Female, age 85, both hemispheres 221.3
2371 Male, age 61, both hemispheres 205.6
Prepositus hypoglossal nucleus
nTPM: 226.1
2086 Male, age 80, both hemispheres 233.1
2855 Female, age 85, right hemisphere 219.1
Principal sensory trigeminal nucleus
nTPM: 229.7
2324 Male, age 76, both hemispheres 293.6
2367 Female, age 91, left hemisphere 237.4
2008 Male, age 80, left hemisphere 195.6
2158 Male, age 61, both hemispheres 192.4
Reticular pontine nucleus, caudal
nTPM: 237.1
2457 Female, age 91, both hemispheres 259.7
2092 Male, age 76, both hemispheres 241.6
2559 Male, age 74, both hemispheres 240.2
2332 Male, age 80, right hemisphere 206.9
Reticular pontine nucleus, oral
nTPM: 239.9
2366 Female, age 91, both hemispheres 263.7
2167 Male, age 76, both hemispheres 260.9
1939 Male, age 80, both hemispheres 258.1
2012 Female, age 85, both hemispheres 222.9
2361 Male, age 74, both hemispheres 194.1
Reticulotegmental nucleus
nTPM: 243.1
2322 Female, age 91, both hemispheres 249.2
2333 Male, age 80, both hemispheres 246.2
2325 Male, age 76, both hemispheres 244.5
2452 Male, age 74, both hemispheres 232.6
Spinal trigeminal nucleus, caudal
nTPM: 231.4
2447 Male, age 76, both hemispheres 252.7
2390 Female, age 91, both hemispheres 247.5
2642 Male, age 74, both hemispheres 227.0
2312 Male, age 61, both hemispheres 215.6
2308 Male, age 80, both hemispheres 214.0
Spinal trigeminal nucleus, interpolar
nTPM: 228.3
2625 Male, age 61, both hemispheres 261.9
2389 Female, age 91, both hemispheres 238.9
2066 Male, age 76, right hemisphere 232.9
2033 Male, age 80, both hemispheres 205.8
2386 Female, age 85, both hemispheres 202.0
Spinal trigeminal nucleus, oral
nTPM: 223.1
1978 Male, age 76, both hemispheres 230.2
2164 Male, age 80, both hemispheres 219.6
2737 Female, age 85, both hemispheres 219.5
Spinal vestibular nucleus
nTPM: 245.0
2748 Male, age 76, both hemispheres 276.6
2384 Male, age 74, both hemispheres 259.1
2186 Female, age 91, both hemispheres 254.4
2806 Female, age 85, both hemispheres 240.4
2780 Male, age 80, both hemispheres 225.1
2796 Male, age 61, both hemispheres 214.2
Subcoeruleus area
nTPM: 228.1
2369 Female, age 85, left hemisphere 247.1
2089 Male, age 76, left hemisphere 231.5
1958 Male, age 80, both hemispheres 225.6
2451 Male, age 74, both hemispheres 218.4
2323 Female, age 91, left hemisphere 218.1
Superior olive
nTPM: 216.6
2561 Female, age 91, both hemispheres 250.6
2329 Male, age 80, right hemisphere 221.1
2020 Male, age 76, both hemispheres 209.6
1875 Female, age 85, both hemispheres 205.0
2364 Male, age 74, right hemisphere 196.7
Superior vestibular nucleus
nTPM: 247.4
2061 Male, age 76, both hemispheres 309.9
2015 Male, age 80, both hemispheres 228.0
2383 Male, age 74, both hemispheres 204.5
Ventral medullary reticular nucleus
nTPM: 238.5
2060 Male, age 76, both hemispheres 254.9
2372 Male, age 61, both hemispheres 222.1
Ventral periolivary nuclei
nTPM: 215.7
2794 Female, age 91, left hemisphere 225.4
2130 Female, age 85, both hemispheres 217.7
2165 Male, age 80, both hemispheres 212.8
2023 Male, age 76, both hemispheres 206.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 236.9
1986 Male, age 76, both hemispheres 256.4
2302 Female, age 91, both hemispheres 255.3
2180 Male, age 61, both hemispheres 234.6
2118 Male, age 80, both hemispheres 222.5
2741 Female, age 85, both hemispheres 215.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 229.7
2456 Female, age 91, both hemispheres 260.0
2359 Male, age 61, both hemispheres 251.1
1959 Male, age 76, both hemispheres 226.4
2840 Female, age 85, both hemispheres 224.2
2449 Male, age 74, both hemispheres 212.8
2161 Male, age 80, both hemispheres 203.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 183.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 183.7
FF:10182-103D2 60 years, female 187.9
FF:10165-103B3 76 years, female 179.5
Medulla oblongata
Scaled Tags Per Million: 156.8
FF:10155-103A2 76 years, female 167.5
FF:10038-101F2 18-64 years, mixed 154.8
FF:10174-103C3 60 years, female 148.0
Pons
Scaled Tags Per Million: 146.0
FF:10033-101E6 18-54 years, mixed 146.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 66.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 66.6
Samples: 4

Max nTPM: 75.3
Min nTPM: 60.1
Sample A Female 75.3
Sample B Female 66.5
Sample C Male 64.5
Sample D Male 60.1
Pons
nTPM: 60.3
Samples: 4

Max nTPM: 68.1
Min nTPM: 54.9
Sample A Female 68.1
Sample B Female 60.4
Sample C Male 54.9
Sample D Male 57.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 48.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 48.0
Samples: 4

Max nTPM: 59.1
Min nTPM: 38.6
Sample A Male 59.1
Sample B Male 48.6
Sample C Female 38.6
Sample D Female 45.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.9
69736400 Antisense, RP_050503_04_G01, Mouse strain C57BL/6J (56 days, male) 5.9
Pons
Expression energy: 6.6
69736400 Antisense, RP_050503_04_G01, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org