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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
510.9
nTPM
FANTOM5:
869.5
Scaled Tags Per Million
Pig:
428.3
nTPM
Allen mouse:
16.7
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
510.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 304.7
1984
Male, age 76, both hemispheres
346.5
2188
Female, age 91, both hemispheres
296.5
2301
Female, age 85, both hemispheres
295.4
2090
Male, age 80, both hemispheres
280.3
Dorsal cochlear nucleus nTPM: 341.1
2802
Male, age 74, right hemisphere
414.3
2058
Male, age 76, both hemispheres
361.0
2187
Female, age 91, both hemispheres
346.6
2370
Male, age 61, both hemispheres
322.6
2378
Male, age 80, both hemispheres
261.0
Dorsal tegmental nucleus nTPM: 342.6
2083
Male, age 80, both hemispheres
412.0
2326
Male, age 74, both hemispheres
339.4
1936
Male, age 76, left hemisphere
322.7
2358
Male, age 61, both hemispheres
296.2
Dorsolateral tegmental area nTPM: 330.6
2654
Male, age 80, both hemispheres
417.9
2141
Male, age 76, both hemispheres
387.0
2751
Female, age 85, both hemispheres
360.2
2360
Male, age 74, both hemispheres
283.1
2337
Male, age 61, both hemispheres
204.6
Kolliker-Fuse nucleus nTPM: 364.7
2163
Male, age 80, both hemispheres
416.1
2793
Female, age 91, left hemisphere
358.1
2315
Male, age 76, right hemisphere
319.9
Lateral lemniscal nuclei nTPM: 445.9
2169
Male, age 76, both hemispheres
551.5
2746
Female, age 85, left hemisphere
486.8
2036
Male, age 80, both hemispheres
453.5
2453
Male, age 74, right hemisphere
450.4
2320
Female, age 91, left hemisphere
287.3
Lateral parabrachial nucleus nTPM: 381.2
2139
Female, age 85, right hemisphere
560.0
2013
Male, age 80, both hemispheres
364.3
2790
Male, age 61, both hemispheres
351.1
2792
Male, age 76, both hemispheres
249.4
Lateral vestibular nucleus nTPM: 367.4
2184
Male, age 76, both hemispheres
382.2
2311
Male, age 80, both hemispheres
352.5
Locus coeruleus nTPM: 435.5
2123
Female, age 91, both hemispheres
509.9
2014
Male, age 55, unknown
470.7
2720
Male, age 74, both hemispheres
458.3
2788
Male, age 74, unknown
420.0
2317
Female, age 72, unknown
413.3
2162
Male, age 80, both hemispheres
405.8
1980
Male, age 76, both hemispheres
370.6
Medial parabrachial nucleus nTPM: 386.8
2854
Male, age 80, both hemispheres
441.2
2170
Female, age 91, both hemispheres
418.1
2786
Male, age 76, both hemispheres
367.6
2156
Male, age 61, both hemispheres
362.2
2463
Female, age 85, right hemisphere
344.9
Medial periolivary nuclei nTPM: 425.4
2171
Female, age 85, both hemispheres
616.4
2063
Male, age 76, both hemispheres
557.4
2791
Male, age 74, right hemisphere
387.4
2458
Female, age 91, both hemispheres
288.9
2081
Male, age 80, both hemispheres
276.8
Motor facial nucleus nTPM: 428.0
2062
Male, age 76, both hemispheres
586.2
2365
Male, age 74, right hemisphere
437.0
2697
Female, age 85, both hemispheres
426.2
2795
Female, age 91, both hemispheres
393.1
2327
Male, age 80, both hemispheres
369.6
2126
Male, age 61, both hemispheres
356.2
Motor trigeminal nucleus nTPM: 368.2
2079
Male, age 80, both hemispheres
399.1
2560
Male, age 74, both hemispheres
396.9
2335
Male, age 61, both hemispheres
387.3
2309
Male, age 76, both hemispheres
376.5
2321
Female, age 91, both hemispheres
281.2
Nuclei of the trapezoid body nTPM: 490.1
2159
Male, age 61, both hemispheres
616.3
2735
Female, age 85, both hemispheres
598.4
1983
Male, age 76, both hemispheres
555.1
2166
Male, age 80, both hemispheres
362.0
2368
Female, age 91, both hemispheres
318.9
Nucleus raphe magnus nTPM: 500.9
2160
Male, age 61, both hemispheres
780.6
2172
Female, age 85, both hemispheres
640.4
2455
Male, age 74, both hemispheres
476.3
2051
Male, age 76, both hemispheres
427.6
2328
Male, age 80, both hemispheres
377.1
2459
Female, age 91, both hemispheres
303.6
Paramedian reticular nucleus nTPM: 417.2
2050
Female, age 85, both hemispheres
519.9
2057
Male, age 80, both hemispheres
416.3
2313
Male, age 61, both hemispheres
411.2
2052
Male, age 76, both hemispheres
321.3
Pedunculopontine tegmental nucleus nTPM: 360.1
1921
Female, age 85, both hemispheres
411.1
2334
Male, age 80, both hemispheres
368.4
2338
Male, age 61, both hemispheres
300.8
Pontine nuclei nTPM: 510.9
2787
Female, age 85, both hemispheres
812.2
2727
Male, age 61, right hemisphere
662.8
1863
Male, age 55, unknown
652.5
1968
Male, age 76, left hemisphere
512.5
2109
Female, age 72, unknown
498.6
2454
Male, age 74, left hemisphere
349.4
2115
Male, age 80, left hemisphere
312.2
2319
Female, age 91, both hemispheres
287.2
Pontine raphe nucleus nTPM: 503.1
2122
Female, age 85, midline
557.5
2853
Male, age 76, midline
448.6
Posteroventral cochlear nucleus nTPM: 321.7
2752
Female, age 85, both hemispheres
469.5
2070
Male, age 76, both hemispheres
388.4
2371
Male, age 61, both hemispheres
307.6
2341
Male, age 80, both hemispheres
229.6
2135
Female, age 91, both hemispheres
213.4
Principal sensory trigeminal nucleus nTPM: 438.8
2158
Male, age 61, both hemispheres
642.2
2008
Male, age 80, left hemisphere
474.3
2324
Male, age 76, both hemispheres
343.0
2367
Female, age 91, left hemisphere
295.8
Reticular pontine nucleus, caudal nTPM: 374.9
2092
Male, age 76, both hemispheres
466.7
2332
Male, age 80, right hemisphere
405.1
2559
Male, age 74, both hemispheres
334.4
2457
Female, age 91, both hemispheres
293.5
Reticular pontine nucleus, oral nTPM: 396.2
2012
Female, age 85, both hemispheres
477.8
2361
Male, age 74, both hemispheres
426.6
1939
Male, age 80, both hemispheres
391.2
2167
Male, age 76, both hemispheres
385.4
2366
Female, age 91, both hemispheres
300.0
Reticulotegmental nucleus nTPM: 374.1
2325
Male, age 76, both hemispheres
439.9
2452
Male, age 74, both hemispheres
392.5
2333
Male, age 80, both hemispheres
335.4
2322
Female, age 91, both hemispheres
328.3
Spinal trigeminal nucleus, oral nTPM: 389.8
2737
Female, age 85, both hemispheres
422.6
1978
Male, age 76, both hemispheres
385.3
2164
Male, age 80, both hemispheres
361.5
Subcoeruleus area nTPM: 399.3
1958
Male, age 80, both hemispheres
465.9
2323
Female, age 91, left hemisphere
459.1
2089
Male, age 76, left hemisphere
395.3
2451
Male, age 74, both hemispheres
356.6
2369
Female, age 85, left hemisphere
319.5
Superior olive nTPM: 413.3
1875
Female, age 85, both hemispheres
616.4
2020
Male, age 76, both hemispheres
418.6
2364
Male, age 74, right hemisphere
367.4
2329
Male, age 80, right hemisphere
339.0
2561
Female, age 91, both hemispheres
325.1
Ventral periolivary nuclei nTPM: 444.4
2130
Female, age 85, both hemispheres
549.4
2165
Male, age 80, both hemispheres
479.1
2023
Male, age 76, both hemispheres
404.8
2794
Female, age 91, left hemisphere
344.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 384.5
2449
Male, age 74, both hemispheres
464.7
2840
Female, age 85, both hemispheres
459.5
1959
Male, age 76, both hemispheres
433.6
2161
Male, age 80, both hemispheres
352.7
2359
Male, age 61, both hemispheres
320.0
2456
Female, age 91, both hemispheres
276.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
428.3
Pig sample
Sample description
nTPM
Pons nTPM: 428.3
Samples: 4
Max nTPM: 533.1
Min nTPM: 315.8
Sample A
Female
533.1
Sample B
Female
315.8
Sample C
Male
360.7
Sample D
Male
503.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
