PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:510.9 nTPM
FANTOM5:869.5 Scaled Tags Per Million
Pig:428.3 nTPM
Mouse:751.6 nTPM
Allen mouse:17.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 510.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 304.7
1984 Male, age 76, both hemispheres 346.5
2188 Female, age 91, both hemispheres 296.5
2301 Female, age 85, both hemispheres 295.4
2090 Male, age 80, both hemispheres 280.3
Area postrema
nTPM: 270.6
2054 Male, age 76, both hemispheres 339.4
2799 Male, age 61, both hemispheres 255.4
2306 Male, age 80, both hemispheres 216.9
Dorsal cochlear nucleus
nTPM: 341.1
2802 Male, age 74, right hemisphere 414.3
2058 Male, age 76, both hemispheres 361.0
2187 Female, age 91, both hemispheres 346.6
2370 Male, age 61, both hemispheres 322.6
2378 Male, age 80, both hemispheres 261.0
Dorsal medullary reticular nucleus
nTPM: 388.0
2040 Female, age 85, both hemispheres 466.8
2088 Male, age 76, both hemispheres 348.9
2373 Male, age 61, both hemispheres 348.2
Dorsal motor vagal complex
nTPM: 414.8
2133 Female, age 91, both hemispheres 495.7
2844 Male, age 55, unknown 479.5
2813 Female, age 72, unknown 464.7
2643 Male, age 74, both hemispheres 464.3
2000 Male, age 74, unknown 448.5
2797 Male, age 61, both hemispheres 392.9
2185 Male, age 76, both hemispheres 297.5
2807 Female, age 85, both hemispheres 275.2
Dorsal tegmental nucleus
nTPM: 342.6
2083 Male, age 80, both hemispheres 412.0
2326 Male, age 74, both hemispheres 339.4
1936 Male, age 76, left hemisphere 322.7
2358 Male, age 61, both hemispheres 296.2
Dorsolateral tegmental area
nTPM: 330.6
2654 Male, age 80, both hemispheres 417.9
2141 Male, age 76, both hemispheres 387.0
2751 Female, age 85, both hemispheres 360.2
2360 Male, age 74, both hemispheres 283.1
2337 Male, age 61, both hemispheres 204.6
Gigantocellular reticular nuclei, medullary
nTPM: 391.9
2462 Male, age 74, both hemispheres 520.7
2022 Male, age 76, right hemisphere 456.4
1876 Female, age 85, both hemispheres 398.1
2310 Male, age 80, both hemispheres 343.1
2387 Female, age 91, both hemispheres 322.7
2314 Male, age 61, both hemispheres 310.3
Gigantocellular reticular nuclei, pars
nTPM: 390.9
2168 Male, age 76, both hemispheres 537.3
2084 Female, age 85, both hemispheres 409.9
2336 Male, age 61, both hemispheres 408.6
2706 Male, age 80, both hemispheres 311.0
2330 Male, age 80, both hemispheres 287.6
Inferior olive
nTPM: 329.9
2563 Male, age 74, both hemispheres 411.8
2628 Female, age 91, both hemispheres 385.3
2085 Female, age 85, both hemispheres 338.1
2178 Male, age 61, both hemispheres 270.5
2379 Male, age 80, both hemispheres 243.8
Kolliker-Fuse nucleus
nTPM: 364.7
2163 Male, age 80, both hemispheres 416.1
2793 Female, age 91, left hemisphere 358.1
2315 Male, age 76, right hemisphere 319.9
Lateral lemniscal nuclei
nTPM: 445.9
2169 Male, age 76, both hemispheres 551.5
2746 Female, age 85, left hemisphere 486.8
2036 Male, age 80, both hemispheres 453.5
2453 Male, age 74, right hemisphere 450.4
2320 Female, age 91, left hemisphere 287.3
Lateral medullary reticular nucleus
nTPM: 355.2
2044 Male, age 76, both hemispheres 450.0
2804 Female, age 91, both hemispheres 433.8
2374 Male, age 61, both hemispheres 352.8
2190 Female, age 85, both hemispheres 326.3
2305 Male, age 74, both hemispheres 286.7
2852 Male, age 80, both hemispheres 281.6
Lateral parabrachial nucleus
nTPM: 381.2
2139 Female, age 85, right hemisphere 560.0
2013 Male, age 80, both hemispheres 364.3
2790 Male, age 61, both hemispheres 351.1
2792 Male, age 76, both hemispheres 249.4
Lateral vestibular nucleus
nTPM: 367.4
2184 Male, age 76, both hemispheres 382.2
2311 Male, age 80, both hemispheres 352.5
Locus coeruleus
nTPM: 435.5
2123 Female, age 91, both hemispheres 509.9
2014 Male, age 55, unknown 470.7
2720 Male, age 74, both hemispheres 458.3
2788 Male, age 74, unknown 420.0
2317 Female, age 72, unknown 413.3
2162 Male, age 80, both hemispheres 405.8
1980 Male, age 76, both hemispheres 370.6
Medial olivary nucleus
nTPM: 269.7
2138 Female, age 91, both hemispheres 352.7
2851 Male, age 80, both hemispheres 269.0
1962 Male, age 76, both hemispheres 251.2
1943 Male, age 61, both hemispheres 206.0
Medial parabrachial nucleus
nTPM: 386.8
2854 Male, age 80, both hemispheres 441.2
2170 Female, age 91, both hemispheres 418.1
2786 Male, age 76, both hemispheres 367.6
2156 Male, age 61, both hemispheres 362.2
2463 Female, age 85, right hemisphere 344.9
Medial periolivary nuclei
nTPM: 425.4
2171 Female, age 85, both hemispheres 616.4
2063 Male, age 76, both hemispheres 557.4
2791 Male, age 74, right hemisphere 387.4
2458 Female, age 91, both hemispheres 288.9
2081 Male, age 80, both hemispheres 276.8
Medial vestibular nucleus
nTPM: 423.6
2803 Female, age 91, both hemispheres 470.5
2093 Male, age 80, both hemispheres 452.7
2801 Male, age 74, both hemispheres 431.1
2134 Male, age 76, both hemispheres 407.3
2743 Female, age 85, both hemispheres 396.4
2624 Male, age 61, both hemispheres 383.9
Motor facial nucleus
nTPM: 428.0
2062 Male, age 76, both hemispheres 586.2
2365 Male, age 74, right hemisphere 437.0
2697 Female, age 85, both hemispheres 426.2
2795 Female, age 91, both hemispheres 393.1
2327 Male, age 80, both hemispheres 369.6
2126 Male, age 61, both hemispheres 356.2
Motor hypoglossal nucleus
nTPM: 410.5
2125 Female, age 91, both hemispheres 483.4
2461 Male, age 61, both hemispheres 447.9
2132 Female, age 85, both hemispheres 433.2
2277 Male, age 76, both hemispheres 351.5
2182 Male, age 80, both hemispheres 336.5
Motor trigeminal nucleus
nTPM: 368.2
2079 Male, age 80, both hemispheres 399.1
2560 Male, age 74, both hemispheres 396.9
2335 Male, age 61, both hemispheres 387.3
2309 Male, age 76, both hemispheres 376.5
2321 Female, age 91, both hemispheres 281.2
Nuclei of the trapezoid body
nTPM: 490.1
2159 Male, age 61, both hemispheres 616.3
2735 Female, age 85, both hemispheres 598.4
1983 Male, age 76, both hemispheres 555.1
2166 Male, age 80, both hemispheres 362.0
2368 Female, age 91, both hemispheres 318.9
Nucleus ambiguus
nTPM: 401.5
2096 Female, age 85, both hemispheres 518.8
2071 Male, age 76, both hemispheres 284.1
Nucleus cuneatus
nTPM: 330.9
2564 Male, age 74, both hemispheres 425.3
2805 Female, age 91, both hemispheres 388.6
2562 Male, age 61, both hemispheres 388.3
2131 Male, age 76, both hemispheres 372.0
2100 Male, age 76, both hemispheres 337.9
2376 Male, age 61, both hemispheres 309.1
2381 Male, age 80, both hemispheres 303.1
2380 Male, age 80, both hemispheres 229.2
2808 Female, age 85, both hemispheres 225.0
Nucleus gracilis
nTPM: 270.9
2627 Male, age 74, both hemispheres 379.6
2382 Male, age 80, both hemispheres 231.7
2299 Female, age 85, both hemispheres 201.4
Nucleus raphe magnus
nTPM: 500.9
2160 Male, age 61, both hemispheres 780.6
2172 Female, age 85, both hemispheres 640.4
2455 Male, age 74, both hemispheres 476.3
2051 Male, age 76, both hemispheres 427.6
2328 Male, age 80, both hemispheres 377.1
2459 Female, age 91, both hemispheres 303.6
Nucleus raphe obscurus
nTPM: 315.7
2800 Male, age 61, midline 382.8
2845 Female, age 85, midline 350.4
2142 Male, age 76, midline 213.8
Nucleus raphe pallidus
nTPM: 303.8
2183 Male, age 80, midline 376.2
1924 Male, age 61, midline 310.8
2145 Male, age 76, midline 224.6
Nucleus tractus solitarii
nTPM: 335.7
2656 Male, age 76, both hemispheres 438.4
2144 Female, age 91, right hemisphere 347.5
2307 Male, age 80, both hemispheres 294.5
2191 Female, age 85, both hemispheres 262.4
Paramedian reticular nucleus
nTPM: 417.2
2050 Female, age 85, both hemispheres 519.9
2057 Male, age 80, both hemispheres 416.3
2313 Male, age 61, both hemispheres 411.2
2052 Male, age 76, both hemispheres 321.3
Parvicellular reticular nuclei
nTPM: 394.5
2558 Male, age 74, both hemispheres 458.4
2095 Male, age 76, both hemispheres 367.6
2119 Male, age 80, both hemispheres 357.6
Parvicellular reticular nuclei, medullary
nTPM: 440.5
2189 Female, age 91, both hemispheres 466.6
2181 Male, age 80, left hemisphere 451.4
2091 Female, age 85, both hemispheres 403.5
Pedunculopontine tegmental nucleus
nTPM: 360.1
1921 Female, age 85, both hemispheres 411.1
2334 Male, age 80, both hemispheres 368.4
2338 Male, age 61, both hemispheres 300.8
Peritrigeminal nucleus
nTPM: 397.6
2179 Male, age 61, both hemispheres 417.8
2067 Female, age 85, both hemispheres 391.7
2136 Male, age 76, both hemispheres 383.4
Pontine nuclei
nTPM: 510.9
2787 Female, age 85, both hemispheres 812.2
2727 Male, age 61, right hemisphere 662.8
1863 Male, age 55, unknown 652.5
1968 Male, age 76, left hemisphere 512.5
2109 Female, age 72, unknown 498.6
2454 Male, age 74, left hemisphere 349.4
2115 Male, age 80, left hemisphere 312.2
2319 Female, age 91, both hemispheres 287.2
Pontine raphe nucleus
nTPM: 503.1
2122 Female, age 85, midline 557.5
2853 Male, age 76, midline 448.6
Posteroventral cochlear nucleus
nTPM: 321.7
2752 Female, age 85, both hemispheres 469.5
2070 Male, age 76, both hemispheres 388.4
2371 Male, age 61, both hemispheres 307.6
2341 Male, age 80, both hemispheres 229.6
2135 Female, age 91, both hemispheres 213.4
Prepositus hypoglossal nucleus
nTPM: 369.1
2855 Female, age 85, right hemisphere 388.6
2086 Male, age 80, both hemispheres 349.6
Principal sensory trigeminal nucleus
nTPM: 438.8
2158 Male, age 61, both hemispheres 642.2
2008 Male, age 80, left hemisphere 474.3
2324 Male, age 76, both hemispheres 343.0
2367 Female, age 91, left hemisphere 295.8
Reticular pontine nucleus, caudal
nTPM: 374.9
2092 Male, age 76, both hemispheres 466.7
2332 Male, age 80, right hemisphere 405.1
2559 Male, age 74, both hemispheres 334.4
2457 Female, age 91, both hemispheres 293.5
Reticular pontine nucleus, oral
nTPM: 396.2
2012 Female, age 85, both hemispheres 477.8
2361 Male, age 74, both hemispheres 426.6
1939 Male, age 80, both hemispheres 391.2
2167 Male, age 76, both hemispheres 385.4
2366 Female, age 91, both hemispheres 300.0
Reticulotegmental nucleus
nTPM: 374.1
2325 Male, age 76, both hemispheres 439.9
2452 Male, age 74, both hemispheres 392.5
2333 Male, age 80, both hemispheres 335.4
2322 Female, age 91, both hemispheres 328.3
Spinal trigeminal nucleus, caudal
nTPM: 387.6
2390 Female, age 91, both hemispheres 484.3
2642 Male, age 74, both hemispheres 420.3
2447 Male, age 76, both hemispheres 389.3
2308 Male, age 80, both hemispheres 326.0
2312 Male, age 61, both hemispheres 318.3
Spinal trigeminal nucleus, interpolar
nTPM: 463.3
2066 Male, age 76, right hemisphere 523.9
2625 Male, age 61, both hemispheres 485.6
2386 Female, age 85, both hemispheres 439.1
2033 Male, age 80, both hemispheres 435.4
2389 Female, age 91, both hemispheres 432.7
Spinal trigeminal nucleus, oral
nTPM: 389.8
2737 Female, age 85, both hemispheres 422.6
1978 Male, age 76, both hemispheres 385.3
2164 Male, age 80, both hemispheres 361.5
Spinal vestibular nucleus
nTPM: 421.9
2186 Female, age 91, both hemispheres 477.1
2780 Male, age 80, both hemispheres 471.5
2806 Female, age 85, both hemispheres 418.7
2796 Male, age 61, both hemispheres 400.2
2748 Male, age 76, both hemispheres 384.8
2384 Male, age 74, both hemispheres 379.0
Subcoeruleus area
nTPM: 399.3
1958 Male, age 80, both hemispheres 465.9
2323 Female, age 91, left hemisphere 459.1
2089 Male, age 76, left hemisphere 395.3
2451 Male, age 74, both hemispheres 356.6
2369 Female, age 85, left hemisphere 319.5
Superior olive
nTPM: 413.3
1875 Female, age 85, both hemispheres 616.4
2020 Male, age 76, both hemispheres 418.6
2364 Male, age 74, right hemisphere 367.4
2329 Male, age 80, right hemisphere 339.0
2561 Female, age 91, both hemispheres 325.1
Superior vestibular nucleus
nTPM: 354.1
2015 Male, age 80, both hemispheres 389.9
2061 Male, age 76, both hemispheres 344.4
2383 Male, age 74, both hemispheres 328.0
Ventral medullary reticular nucleus
nTPM: 371.0
2060 Male, age 76, both hemispheres 406.8
2372 Male, age 61, both hemispheres 335.2
Ventral periolivary nuclei
nTPM: 444.4
2130 Female, age 85, both hemispheres 549.4
2165 Male, age 80, both hemispheres 479.1
2023 Male, age 76, both hemispheres 404.8
2794 Female, age 91, left hemisphere 344.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 370.9
1986 Male, age 76, both hemispheres 416.0
2741 Female, age 85, both hemispheres 414.9
2302 Female, age 91, both hemispheres 386.8
2180 Male, age 61, both hemispheres 371.3
2118 Male, age 80, both hemispheres 265.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 384.5
2449 Male, age 74, both hemispheres 464.7
2840 Female, age 85, both hemispheres 459.5
1959 Male, age 76, both hemispheres 433.6
2161 Male, age 80, both hemispheres 352.7
2359 Male, age 61, both hemispheres 320.0
2456 Female, age 91, both hemispheres 276.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 869.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 544.5
FF:10182-103D2 60 years, female 585.3
FF:10165-103B3 76 years, female 503.6
Medulla oblongata
Scaled Tags Per Million: 451.6
FF:10038-101F2 18-64 years, mixed 544.4
FF:10174-103C3 60 years, female 420.2
FF:10155-103A2 76 years, female 390.1
Pons
Scaled Tags Per Million: 869.5
FF:10033-101E6 18-54 years, mixed 869.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 428.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 296.6
Samples: 4

Max nTPM: 335.3
Min nTPM: 227.8
Sample A Female 318.7
Sample B Female 335.3
Sample C Male 304.4
Sample D Male 227.8
Pons
nTPM: 428.3
Samples: 4

Max nTPM: 533.1
Min nTPM: 315.8
Sample A Female 533.1
Sample B Female 315.8
Sample C Male 360.7
Sample D Male 503.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 751.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 751.6
Samples: 4

Max nTPM: 767.2
Min nTPM: 739.4
Sample A Male 739.4
Sample B Male 751.6
Sample C Female 767.2
Sample D Female 748.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 17.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 17.3
68563043 Antisense, RP_050125_01_A05, Mouse strain C57BL/6J (56 days, male) 19.9
70302222 Antisense, RP_050607_03_H03, Mouse strain C57BL/6J (56 days, male) 14.7
Pons
Expression energy: 16.7
68563043 Antisense, RP_050125_01_A05, Mouse strain C57BL/6J (56 days, male) 19.9
70302222 Antisense, RP_050607_03_H03, Mouse strain C57BL/6J (56 days, male) 13.5

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