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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:307.4 nTPM
HPA Brain:597.5 nTPM
GTEx:307.4 nTPM
FANTOM5:1603.6 Scaled Tags Per Million
Pig:497.0 nTPM
Mouse:278.5 nTPM
Allen mouse:15.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010698
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

597.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 597.5
2481 Female, age 94, left hemisphere 851.5
1857 Female, age 85, left hemisphere 737.0
1854 Male, age 80, left hemisphere 646.3
2289 Male, age 61, right hemisphere 640.7
2290 Female, age 72, unknown 609.9
2288 Male, age 75, left hemisphere 473.7
1781 Male, age 74, unknown 439.4
2846 Female, age 79, unknown 381.9
Globus pallidus, externus
nTPM: 583.8
1996 Male, age 80, right hemisphere 861.8
2646 Male, age 61, right hemisphere 757.4
2567 Female, age 72, unknown 510.2
2772 Female, age 79, unknown 458.9
2395 Male, age 75, both hemispheres 330.5
Globus pallidus, internus
nTPM: 515.2
2037 Male, age 80, right hemisphere 742.9
2483 Female, age 94, right hemisphere 677.8
1818 Male, age 74, unknown 647.7
2287 Male, age 75, right hemisphere 483.5
2566 Female, age 72, unknown 415.0
2778 Female, age 91, both hemispheres 325.3
2111 Female, age 85, right hemisphere 314.3
Nucleus accumbens
nTPM: 436.8
1806 Female, age 85, left hemisphere 602.0
2286 Male, age 75, left hemisphere 496.5
2698 Female, age 72, unknown 468.3
2391 Female, age 94, left hemisphere 456.9
2732 Male, age 80, right hemisphere 392.0
1783 Male, age 74, unknown 382.9
1856 Female, age 91, right hemisphere 371.3
2824 Male, age 61, right hemisphere 324.5
Nucleus basalis of Meynert
nTPM: 493.8
2569 Male, age 61, both hemispheres 863.8
2393 Male, age 80, right hemisphere 435.0
2484 Female, age 94, left hemisphere 427.4
2821 Male, age 75, both hemispheres 249.2
Nucleus of the diagonal band
nTPM: 383.9
1979 Male, age 74, unknown 477.1
2195 Female, age 85, both hemispheres 409.9
2775 Male, age 80, right hemisphere 351.2
2029 Male, age 61, right hemisphere 348.7
1812 Female, age 91, both hemispheres 332.7
Putamen
nTPM: 459.1
2482 Female, age 94, left hemisphere 600.7
1838 Male, age 80, right hemisphere 547.2
2489 Female, age 72, unknown 534.9
2647 Male, age 75, left hemisphere 430.0
1829 Male, age 74, unknown 427.6
1937 Female, age 91, right hemisphere 357.3
2466 Female, age 79, unknown 316.1
Septal nuclei
nTPM: 403.4
2199 Male, age 80, right hemisphere 519.2
2059 Female, age 85, both hemispheres 506.0
2394 Male, age 61, left hemisphere 443.2
2629 Female, age 94, right hemisphere 384.3
1960 Male, age 74, unknown 360.4
2009 Female, age 91, both hemispheres 312.7
2031 Female, age 72, unknown 297.7
Stria terminalis, bed nucleus
nTPM: 383.9
2201 Male, age 74, unknown 533.9
2486 Female, age 94, both hemispheres 315.7
1974 Female, age 91, both hemispheres 302.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

307.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 306.9
Samples: 246

Max nTPM: 802.7
Min nTPM: 31.9
Std nTPM: 139.7
Median nTPM: 280.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 802.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 783.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 730.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 674.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 634.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 625.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 619.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 614.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 601.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 597.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 586.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 576.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 574.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 571.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 549.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 549.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 543.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 535.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 516.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 515.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 514.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 514.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 513.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 506.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 506.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 504.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 503.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 484.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 479.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 479.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 473.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 473.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 472.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 469.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 469.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 466.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 464.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 459.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 457.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 455.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 452.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 451.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 450.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 448.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 444.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 444.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 443.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 427.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 426.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 422.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 418.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 412.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 411.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 409.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 408.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 406.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 405.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 404.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 403.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 398.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 391.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 390.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 387.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 386.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 384.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 380.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 377.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 371.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 369.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 369.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 366.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 362.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 362.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 361.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 359.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 356.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 348.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 348.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 344.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 342.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 340.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 337.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 331.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 331.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 330.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 329.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 328.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 327.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 327.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 324.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 323.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 322.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 320.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 318.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 317.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 317.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 314.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 312.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 310.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 310.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 309.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 309.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 306.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 304.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 303.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 301.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 299.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 299.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 298.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 293.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 292.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 292.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 291.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 291.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 291.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 290.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 288.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 287.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 286.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 285.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 285.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 281.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 281.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 279.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 278.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 277.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 277.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 275.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 272.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 271.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 270.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 270.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 270.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 269.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 269.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 267.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 266.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 262.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 259.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 257.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 256.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 255.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 254.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 254.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 253.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 251.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 248.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 248.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 247.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 246.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 246.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 243.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 243.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 242.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 240.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 240.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 238.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 237.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 236.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 236.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 236.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 235.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 234.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 234.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 233.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 231.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 230.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 229.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 229.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 228.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 227.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 225.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 224.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 224.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 221.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 220.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 220.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 219.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 219.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 218.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 218.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 218.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 216.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 215.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 209.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 209.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 208.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 207.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 206.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 203.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 201.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 201.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 200.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 197.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 196.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 196.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 195.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 195.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 194.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 190.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 189.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 187.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 184.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 181.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 181.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 181.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 179.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 177.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 177.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 176.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 174.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 171.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 169.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 169.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 168.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 168.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 166.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 166.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 165.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 162.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 161.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 160.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 156.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 151.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 148.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 146.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 143.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 128.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 126.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 124.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 115.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 111.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 108.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 92.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 78.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 69.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 42.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 35.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 31.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 256.6
Samples: 246

Max nTPM: 702.7
Min nTPM: 51.9
Std nTPM: 116.6
Median nTPM: 231.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 702.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 671.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 641.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 608.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 599.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 595.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 584.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 557.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 521.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 521.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 511.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 508.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 507.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 493.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 493.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 479.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 467.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 464.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 444.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 428.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 418.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 409.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 406.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 405.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 404.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 398.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 393.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 392.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 390.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 390.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 383.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 382.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 376.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 374.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 373.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 368.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 367.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 363.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 358.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 349.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 346.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 343.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 342.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 338.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 337.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 335.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 333.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 332.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 332.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 331.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 327.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 327.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 326.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 325.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 322.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 321.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 316.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 315.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 314.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 309.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 309.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 308.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 306.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 305.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 305.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 303.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 302.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 302.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 297.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 296.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 295.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 294.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 293.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 289.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 288.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 288.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 288.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 287.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 286.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 285.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 284.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 284.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 283.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 282.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 281.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 279.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 279.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 278.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 278.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 278.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 278.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 274.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 273.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 271.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 271.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 270.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 267.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 265.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 265.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 264.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 258.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 257.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 257.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 257.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 255.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 253.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 252.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 252.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 250.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 249.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 249.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 247.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 247.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 244.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 241.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 239.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 239.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 237.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 237.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 237.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 236.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 231.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 231.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 231.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 229.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 229.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 228.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 227.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 226.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 226.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 226.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 226.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 224.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 223.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 223.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 223.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 218.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 217.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 217.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 216.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 215.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 215.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 214.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 211.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 210.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 208.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 207.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 206.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 206.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 205.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 205.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 204.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 204.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 204.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 203.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 202.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 201.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 201.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 201.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 201.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 199.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 199.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 199.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 199.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 198.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 196.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 196.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 195.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 191.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 191.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 189.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 189.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 189.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 186.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 185.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 184.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 184.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 183.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 183.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 178.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 178.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 177.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 177.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 175.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 175.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 174.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 173.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 173.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 171.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 170.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 167.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 165.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 164.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 163.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 163.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 162.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 162.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 161.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 160.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 160.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 160.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 159.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 159.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 159.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 156.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 156.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 153.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 153.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 152.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 152.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 150.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 148.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 147.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 146.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 146.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 145.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 144.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 142.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 140.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 139.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 136.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 135.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 134.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 128.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 125.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 121.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 118.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 114.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 112.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 112.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 112.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 111.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 106.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 106.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 106.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 104.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 103.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 103.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 96.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 87.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 86.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 85.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 84.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 77.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 74.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 51.9
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Brain - Putamen (basal ganglia)
Average nTPM: 307.4
Samples: 205

Max nTPM: 962.8
Min nTPM: 31.5
Std nTPM: 155.2
Median nTPM: 283.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 962.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 794.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 753.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 712.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 647.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 647.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 628.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 622.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 597.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 593.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 591.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 590.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 590.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 589.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 583.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 580.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 572.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 526.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 522.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 519.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 514.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 510.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 486.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 484.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 484.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 480.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 473.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 467.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 466.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 464.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 462.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 461.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 458.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 453.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 445.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 445.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 438.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 433.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 433.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 431.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 425.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 425.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 420.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 413.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 413.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 410.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 405.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 398.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 398.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 395.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 395.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 392.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 392.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 390.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 389.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 386.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 385.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 380.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 375.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 373.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 373.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 372.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 371.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 370.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 368.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 368.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 367.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 365.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 360.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 360.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 358.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 356.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 347.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 347.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 338.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 334.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 332.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 332.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 329.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 328.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 328.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 327.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 322.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 322.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 320.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 316.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 310.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 309.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 309.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 308.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 307.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 306.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 303.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 300.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 300.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 299.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 298.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 294.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 292.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 292.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 287.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 286.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 283.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 282.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 280.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 280.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 278.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 277.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 273.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 268.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 268.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 268.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 268.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 266.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 265.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 265.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 264.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 258.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 257.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 257.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 252.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 251.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 250.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 245.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 243.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 241.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 241.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 239.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 238.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 236.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 236.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 236.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 233.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 232.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 232.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 229.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 228.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 227.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 227.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 222.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 220.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 219.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 214.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 211.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 207.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 206.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 205.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 200.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 198.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 197.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 196.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 193.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 189.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 188.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 185.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 185.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 184.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 184.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 183.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 182.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 181.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 179.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 176.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 173.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 170.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 170.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 170.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 167.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 165.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 165.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 164.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 159.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 158.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 158.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 155.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 151.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 150.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 150.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 148.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 147.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 147.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 141.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 141.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 139.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 138.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 128.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 117.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 115.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 114.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 110.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 107.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 106.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 105.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 94.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 93.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 83.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 80.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 77.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 76.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 73.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 69.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 63.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 54.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 45.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 31.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1603.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1269.8
FF:10164-103B2 76 years, female 1269.8
Nucleus accumbens
Scaled Tags Per Million: 954.4
FF:10037-101F1 23-56 years, mixed 954.4
Putamen
Scaled Tags Per Million: 1289.2
FF:10176-103C5 60 years, female 1289.2
Globus pallidus
Scaled Tags Per Million: 1603.6
FF:10175-103C4 60 years, female 2084.3
FF:10161-103A8 76 years, female 1122.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

497.0
Pig sample Sample description nTPM
Caudate
nTPM: 312.9
Samples: 4

Max nTPM: 425.3
Min nTPM: 232.2
Sample A Female 232.2
Sample B Female 301.1
Sample C Male 425.3
Sample D Male 293.0
Putamen
nTPM: 497.0
Samples: 4

Max nTPM: 587.6
Min nTPM: 351.7
Sample A Female 584.8
Sample B Female 351.7
Sample C Male 587.6
Sample D Male 463.9
Septum
nTPM: 332.4
Samples: 4

Max nTPM: 476.0
Min nTPM: 238.5
Sample A Female 238.5
Sample B Female 253.1
Sample C Male 476.0
Sample D Male 361.8
Ventral pallidum
nTPM: 381.8
Samples: 4

Max nTPM: 702.2
Min nTPM: 233.2
Sample A Female 233.2
Sample B Female 335.9
Sample C Male 702.2
Sample D Male 255.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 235.7
Samples: 4

Max nTPM: 259.7
Min nTPM: 227.3
Sample A Male 227.3
Sample B Male 227.4
Sample C Female 228.5
Sample D Female 259.7
Septum
nTPM: 278.5
Samples: 4

Max nTPM: 291.8
Min nTPM: 257.5
Sample A Male 257.5
Sample B Male 288.5
Sample C Female 276.0
Sample D Female 291.8
Ventral forebrain
nTPM: 256.8
Samples: 4

Max nTPM: 283.6
Min nTPM: 225.5
Sample A Male 225.5
Sample B Male 283.6
Sample C Female 280.8
Sample D Female 237.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.1
74819255 Antisense, RP_060315_02_D07, Mouse strain C57BL/6J (56 days, male) 11.2
68744958 Antisense, RP_050210_01_A04, Mouse strain C57BL/6J (56 days, male) 11.1
Pallidum
Expression energy: 15.0
74819255 Antisense, RP_060315_02_D07, Mouse strain C57BL/6J (56 days, male) 15.1
68744958 Antisense, RP_050210_01_A04, Mouse strain C57BL/6J (56 days, male) 14.9

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