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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
675.1
nTPM
FANTOM5:
1818.1
Scaled Tags Per Million
Pig:
723.7
nTPM
Allen mouse:
15.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
675.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 380.2
1984
Male, age 76, both hemispheres
529.4
2301
Female, age 85, both hemispheres
436.4
2090
Male, age 80, both hemispheres
322.7
2188
Female, age 91, both hemispheres
232.2
Dorsal cochlear nucleus nTPM: 554.6
2058
Male, age 76, both hemispheres
665.7
2370
Male, age 61, both hemispheres
655.4
2802
Male, age 74, right hemisphere
593.2
2187
Female, age 91, both hemispheres
433.2
2378
Male, age 80, both hemispheres
425.6
Dorsal tegmental nucleus nTPM: 570.1
1936
Male, age 76, left hemisphere
661.7
2083
Male, age 80, both hemispheres
609.7
2326
Male, age 74, both hemispheres
511.5
2358
Male, age 61, both hemispheres
497.4
Dorsolateral tegmental area nTPM: 504.5
2141
Male, age 76, both hemispheres
617.2
2654
Male, age 80, both hemispheres
564.9
2751
Female, age 85, both hemispheres
474.7
2360
Male, age 74, both hemispheres
442.0
2337
Male, age 61, both hemispheres
423.6
Kolliker-Fuse nucleus nTPM: 520.7
2163
Male, age 80, both hemispheres
665.7
2315
Male, age 76, right hemisphere
609.2
2793
Female, age 91, left hemisphere
287.4
Lateral lemniscal nuclei nTPM: 454.1
2169
Male, age 76, both hemispheres
579.6
2453
Male, age 74, right hemisphere
481.3
2036
Male, age 80, both hemispheres
458.9
2746
Female, age 85, left hemisphere
423.0
2320
Female, age 91, left hemisphere
327.6
Lateral parabrachial nucleus nTPM: 450.4
2139
Female, age 85, right hemisphere
636.4
2792
Male, age 76, both hemispheres
506.3
2013
Male, age 80, both hemispheres
383.0
2790
Male, age 61, both hemispheres
275.8
Lateral vestibular nucleus nTPM: 675.1
2184
Male, age 76, both hemispheres
758.3
2311
Male, age 80, both hemispheres
592.0
Locus coeruleus nTPM: 530.6
2317
Female, age 72, unknown
688.9
1980
Male, age 76, both hemispheres
585.6
2788
Male, age 74, unknown
559.2
2123
Female, age 91, both hemispheres
529.2
2014
Male, age 55, unknown
492.3
2162
Male, age 80, both hemispheres
445.9
2720
Male, age 74, both hemispheres
413.1
Medial parabrachial nucleus nTPM: 492.3
2786
Male, age 76, both hemispheres
630.5
2854
Male, age 80, both hemispheres
539.3
2156
Male, age 61, both hemispheres
484.2
2170
Female, age 91, both hemispheres
425.6
2463
Female, age 85, right hemisphere
381.7
Medial periolivary nuclei nTPM: 428.5
2171
Female, age 85, both hemispheres
575.5
2063
Male, age 76, both hemispheres
448.9
2791
Male, age 74, right hemisphere
412.0
2458
Female, age 91, both hemispheres
387.6
2081
Male, age 80, both hemispheres
318.5
Motor facial nucleus nTPM: 481.0
2795
Female, age 91, both hemispheres
914.5
2062
Male, age 76, both hemispheres
562.7
2126
Male, age 61, both hemispheres
408.4
2365
Male, age 74, right hemisphere
369.9
2327
Male, age 80, both hemispheres
350.9
2697
Female, age 85, both hemispheres
279.5
Motor trigeminal nucleus nTPM: 463.8
2309
Male, age 76, both hemispheres
630.3
2335
Male, age 61, both hemispheres
588.7
2079
Male, age 80, both hemispheres
441.5
2560
Male, age 74, both hemispheres
332.4
2321
Female, age 91, both hemispheres
326.0
Nuclei of the trapezoid body nTPM: 503.4
2368
Female, age 91, both hemispheres
622.2
1983
Male, age 76, both hemispheres
614.7
2735
Female, age 85, both hemispheres
516.0
2159
Male, age 61, both hemispheres
409.6
2166
Male, age 80, both hemispheres
354.2
Nucleus raphe magnus nTPM: 464.7
2051
Male, age 76, both hemispheres
646.0
2455
Male, age 74, both hemispheres
499.0
2328
Male, age 80, both hemispheres
438.0
2160
Male, age 61, both hemispheres
424.4
2172
Female, age 85, both hemispheres
391.0
2459
Female, age 91, both hemispheres
390.0
Paramedian reticular nucleus nTPM: 498.5
2313
Male, age 61, both hemispheres
588.0
2050
Female, age 85, both hemispheres
522.0
2057
Male, age 80, both hemispheres
456.0
2052
Male, age 76, both hemispheres
427.9
Pedunculopontine tegmental nucleus nTPM: 591.4
2334
Male, age 80, both hemispheres
617.1
1921
Female, age 85, both hemispheres
599.6
2338
Male, age 61, both hemispheres
557.5
Pontine nuclei nTPM: 377.0
1968
Male, age 76, left hemisphere
532.6
1863
Male, age 55, unknown
514.4
2787
Female, age 85, both hemispheres
502.2
2109
Female, age 72, unknown
331.8
2115
Male, age 80, left hemisphere
330.2
2727
Male, age 61, right hemisphere
300.9
2319
Female, age 91, both hemispheres
276.5
2454
Male, age 74, left hemisphere
227.7
Pontine raphe nucleus nTPM: 605.4
2853
Male, age 76, midline
682.4
2122
Female, age 85, midline
528.3
Posteroventral cochlear nucleus nTPM: 426.1
2371
Male, age 61, both hemispheres
679.3
2752
Female, age 85, both hemispheres
527.1
2070
Male, age 76, both hemispheres
486.4
2341
Male, age 80, both hemispheres
275.4
2135
Female, age 91, both hemispheres
162.2
Principal sensory trigeminal nucleus nTPM: 498.9
2324
Male, age 76, both hemispheres
994.8
2008
Male, age 80, left hemisphere
381.6
2158
Male, age 61, both hemispheres
356.3
2367
Female, age 91, left hemisphere
263.0
Reticular pontine nucleus, caudal nTPM: 422.5
2332
Male, age 80, right hemisphere
545.4
2092
Male, age 76, both hemispheres
544.7
2457
Female, age 91, both hemispheres
372.1
2559
Male, age 74, both hemispheres
227.6
Reticular pontine nucleus, oral nTPM: 430.2
2167
Male, age 76, both hemispheres
643.3
1939
Male, age 80, both hemispheres
580.6
2012
Female, age 85, both hemispheres
476.8
2366
Female, age 91, both hemispheres
289.2
2361
Male, age 74, both hemispheres
160.9
Reticulotegmental nucleus nTPM: 671.5
2333
Male, age 80, both hemispheres
822.2
2322
Female, age 91, both hemispheres
802.4
2325
Male, age 76, both hemispheres
618.6
2452
Male, age 74, both hemispheres
443.0
Spinal trigeminal nucleus, oral nTPM: 542.4
1978
Male, age 76, both hemispheres
591.1
2737
Female, age 85, both hemispheres
577.3
2164
Male, age 80, both hemispheres
458.8
Subcoeruleus area nTPM: 513.5
2323
Female, age 91, left hemisphere
674.7
1958
Male, age 80, both hemispheres
535.9
2089
Male, age 76, left hemisphere
457.5
2451
Male, age 74, both hemispheres
450.7
2369
Female, age 85, left hemisphere
448.6
Superior olive nTPM: 378.4
2329
Male, age 80, right hemisphere
417.1
2561
Female, age 91, both hemispheres
416.2
2364
Male, age 74, right hemisphere
362.7
2020
Male, age 76, both hemispheres
356.1
1875
Female, age 85, both hemispheres
339.7
Ventral periolivary nuclei nTPM: 425.7
2130
Female, age 85, both hemispheres
618.1
2165
Male, age 80, both hemispheres
475.7
2023
Male, age 76, both hemispheres
304.9
2794
Female, age 91, left hemisphere
304.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 483.5
2840
Female, age 85, both hemispheres
575.8
2359
Male, age 61, both hemispheres
527.5
2456
Female, age 91, both hemispheres
512.7
1959
Male, age 76, both hemispheres
469.2
2161
Male, age 80, both hemispheres
409.5
2449
Male, age 74, both hemispheres
406.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
723.7
Pig sample
Sample description
nTPM
Pons nTPM: 723.7
Samples: 4
Max nTPM: 950.5
Min nTPM: 465.7
Sample A
Female
950.5
Sample B
Female
465.7
Sample C
Male
589.8
Sample D
Male
888.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
