PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:819.8 nTPM
FANTOM5:1818.1 Scaled Tags Per Million
Pig:772.5 nTPM
Mouse:447.9 nTPM
Allen mouse:15.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 819.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 380.2
1984 Male, age 76, both hemispheres 529.4
2301 Female, age 85, both hemispheres 436.4
2090 Male, age 80, both hemispheres 322.7
2188 Female, age 91, both hemispheres 232.2
Area postrema
nTPM: 766.0
2799 Male, age 61, both hemispheres 994.2
2054 Male, age 76, both hemispheres 706.0
2306 Male, age 80, both hemispheres 597.8
Dorsal cochlear nucleus
nTPM: 554.6
2058 Male, age 76, both hemispheres 665.7
2370 Male, age 61, both hemispheres 655.4
2802 Male, age 74, right hemisphere 593.2
2187 Female, age 91, both hemispheres 433.2
2378 Male, age 80, both hemispheres 425.6
Dorsal medullary reticular nucleus
nTPM: 500.3
2088 Male, age 76, both hemispheres 563.2
2373 Male, age 61, both hemispheres 482.7
2040 Female, age 85, both hemispheres 454.8
Dorsal motor vagal complex
nTPM: 691.7
2797 Male, age 61, both hemispheres 1068.6
2185 Male, age 76, both hemispheres 968.5
2844 Male, age 55, unknown 741.2
2813 Female, age 72, unknown 701.7
2000 Male, age 74, unknown 683.3
2643 Male, age 74, both hemispheres 564.2
2133 Female, age 91, both hemispheres 557.4
2807 Female, age 85, both hemispheres 248.6
Dorsal tegmental nucleus
nTPM: 570.1
1936 Male, age 76, left hemisphere 661.7
2083 Male, age 80, both hemispheres 609.7
2326 Male, age 74, both hemispheres 511.5
2358 Male, age 61, both hemispheres 497.4
Dorsolateral tegmental area
nTPM: 504.5
2141 Male, age 76, both hemispheres 617.2
2654 Male, age 80, both hemispheres 564.9
2751 Female, age 85, both hemispheres 474.7
2360 Male, age 74, both hemispheres 442.0
2337 Male, age 61, both hemispheres 423.6
Gigantocellular reticular nuclei, medullary
nTPM: 499.0
2387 Female, age 91, both hemispheres 601.3
2022 Male, age 76, right hemisphere 570.6
2314 Male, age 61, both hemispheres 541.0
1876 Female, age 85, both hemispheres 498.5
2462 Male, age 74, both hemispheres 395.7
2310 Male, age 80, both hemispheres 386.8
Gigantocellular reticular nuclei, pars
nTPM: 523.4
2084 Female, age 85, both hemispheres 605.5
2168 Male, age 76, both hemispheres 530.3
2330 Male, age 80, both hemispheres 521.7
2336 Male, age 61, both hemispheres 481.3
2706 Male, age 80, both hemispheres 478.2
Inferior olive
nTPM: 819.8
2085 Female, age 85, both hemispheres 915.6
2563 Male, age 74, both hemispheres 886.7
2628 Female, age 91, both hemispheres 877.6
2379 Male, age 80, both hemispheres 804.2
2178 Male, age 61, both hemispheres 614.9
Kolliker-Fuse nucleus
nTPM: 520.7
2163 Male, age 80, both hemispheres 665.7
2315 Male, age 76, right hemisphere 609.2
2793 Female, age 91, left hemisphere 287.4
Lateral lemniscal nuclei
nTPM: 454.1
2169 Male, age 76, both hemispheres 579.6
2453 Male, age 74, right hemisphere 481.3
2036 Male, age 80, both hemispheres 458.9
2746 Female, age 85, left hemisphere 423.0
2320 Female, age 91, left hemisphere 327.6
Lateral medullary reticular nucleus
nTPM: 521.5
2804 Female, age 91, both hemispheres 861.1
2374 Male, age 61, both hemispheres 558.0
2044 Male, age 76, both hemispheres 542.3
2190 Female, age 85, both hemispheres 425.4
2852 Male, age 80, both hemispheres 408.1
2305 Male, age 74, both hemispheres 333.8
Lateral parabrachial nucleus
nTPM: 450.4
2139 Female, age 85, right hemisphere 636.4
2792 Male, age 76, both hemispheres 506.3
2013 Male, age 80, both hemispheres 383.0
2790 Male, age 61, both hemispheres 275.8
Lateral vestibular nucleus
nTPM: 675.1
2184 Male, age 76, both hemispheres 758.3
2311 Male, age 80, both hemispheres 592.0
Locus coeruleus
nTPM: 530.6
2317 Female, age 72, unknown 688.9
1980 Male, age 76, both hemispheres 585.6
2788 Male, age 74, unknown 559.2
2123 Female, age 91, both hemispheres 529.2
2014 Male, age 55, unknown 492.3
2162 Male, age 80, both hemispheres 445.9
2720 Male, age 74, both hemispheres 413.1
Medial olivary nucleus
nTPM: 556.0
2138 Female, age 91, both hemispheres 816.9
2851 Male, age 80, both hemispheres 584.5
1962 Male, age 76, both hemispheres 450.2
1943 Male, age 61, both hemispheres 372.3
Medial parabrachial nucleus
nTPM: 492.3
2786 Male, age 76, both hemispheres 630.5
2854 Male, age 80, both hemispheres 539.3
2156 Male, age 61, both hemispheres 484.2
2170 Female, age 91, both hemispheres 425.6
2463 Female, age 85, right hemisphere 381.7
Medial periolivary nuclei
nTPM: 428.5
2171 Female, age 85, both hemispheres 575.5
2063 Male, age 76, both hemispheres 448.9
2791 Male, age 74, right hemisphere 412.0
2458 Female, age 91, both hemispheres 387.6
2081 Male, age 80, both hemispheres 318.5
Medial vestibular nucleus
nTPM: 620.6
2624 Male, age 61, both hemispheres 833.7
2134 Male, age 76, both hemispheres 652.0
2803 Female, age 91, both hemispheres 645.0
2093 Male, age 80, both hemispheres 638.1
2801 Male, age 74, both hemispheres 542.4
2743 Female, age 85, both hemispheres 412.6
Motor facial nucleus
nTPM: 481.0
2795 Female, age 91, both hemispheres 914.5
2062 Male, age 76, both hemispheres 562.7
2126 Male, age 61, both hemispheres 408.4
2365 Male, age 74, right hemisphere 369.9
2327 Male, age 80, both hemispheres 350.9
2697 Female, age 85, both hemispheres 279.5
Motor hypoglossal nucleus
nTPM: 465.2
2461 Male, age 61, both hemispheres 640.7
2277 Male, age 76, both hemispheres 577.2
2125 Female, age 91, both hemispheres 556.5
2182 Male, age 80, both hemispheres 317.0
2132 Female, age 85, both hemispheres 234.9
Motor trigeminal nucleus
nTPM: 463.8
2309 Male, age 76, both hemispheres 630.3
2335 Male, age 61, both hemispheres 588.7
2079 Male, age 80, both hemispheres 441.5
2560 Male, age 74, both hemispheres 332.4
2321 Female, age 91, both hemispheres 326.0
Nuclei of the trapezoid body
nTPM: 503.4
2368 Female, age 91, both hemispheres 622.2
1983 Male, age 76, both hemispheres 614.7
2735 Female, age 85, both hemispheres 516.0
2159 Male, age 61, both hemispheres 409.6
2166 Male, age 80, both hemispheres 354.2
Nucleus ambiguus
nTPM: 478.1
2071 Male, age 76, both hemispheres 659.4
2096 Female, age 85, both hemispheres 296.8
Nucleus cuneatus
nTPM: 590.7
2564 Male, age 74, both hemispheres 754.7
2805 Female, age 91, both hemispheres 733.1
2100 Male, age 76, both hemispheres 718.5
2562 Male, age 61, both hemispheres 692.1
2131 Male, age 76, both hemispheres 644.8
2376 Male, age 61, both hemispheres 488.4
2380 Male, age 80, both hemispheres 448.0
2381 Male, age 80, both hemispheres 441.5
2808 Female, age 85, both hemispheres 395.3
Nucleus gracilis
nTPM: 473.4
2627 Male, age 74, both hemispheres 651.8
2299 Female, age 85, both hemispheres 471.8
2382 Male, age 80, both hemispheres 296.4
Nucleus raphe magnus
nTPM: 464.7
2051 Male, age 76, both hemispheres 646.0
2455 Male, age 74, both hemispheres 499.0
2328 Male, age 80, both hemispheres 438.0
2160 Male, age 61, both hemispheres 424.4
2172 Female, age 85, both hemispheres 391.0
2459 Female, age 91, both hemispheres 390.0
Nucleus raphe obscurus
nTPM: 404.2
2142 Male, age 76, midline 510.7
2800 Male, age 61, midline 378.6
2845 Female, age 85, midline 323.2
Nucleus raphe pallidus
nTPM: 407.2
2145 Male, age 76, midline 446.9
2183 Male, age 80, midline 442.6
1924 Male, age 61, midline 332.0
Nucleus tractus solitarii
nTPM: 414.3
2656 Male, age 76, both hemispheres 562.0
2144 Female, age 91, right hemisphere 459.9
2191 Female, age 85, both hemispheres 326.4
2307 Male, age 80, both hemispheres 308.9
Paramedian reticular nucleus
nTPM: 498.5
2313 Male, age 61, both hemispheres 588.0
2050 Female, age 85, both hemispheres 522.0
2057 Male, age 80, both hemispheres 456.0
2052 Male, age 76, both hemispheres 427.9
Parvicellular reticular nuclei
nTPM: 520.0
2095 Male, age 76, both hemispheres 576.4
2119 Male, age 80, both hemispheres 557.4
2558 Male, age 74, both hemispheres 426.4
Parvicellular reticular nuclei, medullary
nTPM: 576.7
2181 Male, age 80, left hemisphere 609.4
2091 Female, age 85, both hemispheres 575.1
2189 Female, age 91, both hemispheres 545.7
Pedunculopontine tegmental nucleus
nTPM: 591.4
2334 Male, age 80, both hemispheres 617.1
1921 Female, age 85, both hemispheres 599.6
2338 Male, age 61, both hemispheres 557.5
Peritrigeminal nucleus
nTPM: 555.4
2136 Male, age 76, both hemispheres 657.3
2067 Female, age 85, both hemispheres 573.6
2179 Male, age 61, both hemispheres 435.3
Pontine nuclei
nTPM: 377.0
1968 Male, age 76, left hemisphere 532.6
1863 Male, age 55, unknown 514.4
2787 Female, age 85, both hemispheres 502.2
2109 Female, age 72, unknown 331.8
2115 Male, age 80, left hemisphere 330.2
2727 Male, age 61, right hemisphere 300.9
2319 Female, age 91, both hemispheres 276.5
2454 Male, age 74, left hemisphere 227.7
Pontine raphe nucleus
nTPM: 605.4
2853 Male, age 76, midline 682.4
2122 Female, age 85, midline 528.3
Posteroventral cochlear nucleus
nTPM: 426.1
2371 Male, age 61, both hemispheres 679.3
2752 Female, age 85, both hemispheres 527.1
2070 Male, age 76, both hemispheres 486.4
2341 Male, age 80, both hemispheres 275.4
2135 Female, age 91, both hemispheres 162.2
Prepositus hypoglossal nucleus
nTPM: 457.9
2086 Male, age 80, both hemispheres 542.6
2855 Female, age 85, right hemisphere 373.1
Principal sensory trigeminal nucleus
nTPM: 498.9
2324 Male, age 76, both hemispheres 994.8
2008 Male, age 80, left hemisphere 381.6
2158 Male, age 61, both hemispheres 356.3
2367 Female, age 91, left hemisphere 263.0
Reticular pontine nucleus, caudal
nTPM: 422.5
2332 Male, age 80, right hemisphere 545.4
2092 Male, age 76, both hemispheres 544.7
2457 Female, age 91, both hemispheres 372.1
2559 Male, age 74, both hemispheres 227.6
Reticular pontine nucleus, oral
nTPM: 430.2
2167 Male, age 76, both hemispheres 643.3
1939 Male, age 80, both hemispheres 580.6
2012 Female, age 85, both hemispheres 476.8
2366 Female, age 91, both hemispheres 289.2
2361 Male, age 74, both hemispheres 160.9
Reticulotegmental nucleus
nTPM: 671.5
2333 Male, age 80, both hemispheres 822.2
2322 Female, age 91, both hemispheres 802.4
2325 Male, age 76, both hemispheres 618.6
2452 Male, age 74, both hemispheres 443.0
Spinal trigeminal nucleus, caudal
nTPM: 538.1
2447 Male, age 76, both hemispheres 638.8
2390 Female, age 91, both hemispheres 624.7
2308 Male, age 80, both hemispheres 479.5
2642 Male, age 74, both hemispheres 475.9
2312 Male, age 61, both hemispheres 471.4
Spinal trigeminal nucleus, interpolar
nTPM: 596.4
2625 Male, age 61, both hemispheres 1047.3
2389 Female, age 91, both hemispheres 549.6
2066 Male, age 76, right hemisphere 523.4
2386 Female, age 85, both hemispheres 433.2
2033 Male, age 80, both hemispheres 428.3
Spinal trigeminal nucleus, oral
nTPM: 542.4
1978 Male, age 76, both hemispheres 591.1
2737 Female, age 85, both hemispheres 577.3
2164 Male, age 80, both hemispheres 458.8
Spinal vestibular nucleus
nTPM: 555.6
2796 Male, age 61, both hemispheres 793.9
2186 Female, age 91, both hemispheres 610.1
2748 Male, age 76, both hemispheres 582.3
2806 Female, age 85, both hemispheres 526.0
2780 Male, age 80, both hemispheres 443.8
2384 Male, age 74, both hemispheres 377.8
Subcoeruleus area
nTPM: 513.5
2323 Female, age 91, left hemisphere 674.7
1958 Male, age 80, both hemispheres 535.9
2089 Male, age 76, left hemisphere 457.5
2451 Male, age 74, both hemispheres 450.7
2369 Female, age 85, left hemisphere 448.6
Superior olive
nTPM: 378.4
2329 Male, age 80, right hemisphere 417.1
2561 Female, age 91, both hemispheres 416.2
2364 Male, age 74, right hemisphere 362.7
2020 Male, age 76, both hemispheres 356.1
1875 Female, age 85, both hemispheres 339.7
Superior vestibular nucleus
nTPM: 572.0
2061 Male, age 76, both hemispheres 711.0
2015 Male, age 80, both hemispheres 514.4
2383 Male, age 74, both hemispheres 490.7
Ventral medullary reticular nucleus
nTPM: 512.3
2372 Male, age 61, both hemispheres 513.6
2060 Male, age 76, both hemispheres 511.1
Ventral periolivary nuclei
nTPM: 425.7
2130 Female, age 85, both hemispheres 618.1
2165 Male, age 80, both hemispheres 475.7
2023 Male, age 76, both hemispheres 304.9
2794 Female, age 91, left hemisphere 304.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 519.3
2302 Female, age 91, both hemispheres 840.3
1986 Male, age 76, both hemispheres 559.4
2180 Male, age 61, both hemispheres 461.1
2741 Female, age 85, both hemispheres 423.2
2118 Male, age 80, both hemispheres 312.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 483.5
2840 Female, age 85, both hemispheres 575.8
2359 Male, age 61, both hemispheres 527.5
2456 Female, age 91, both hemispheres 512.7
1959 Male, age 76, both hemispheres 469.2
2161 Male, age 80, both hemispheres 409.5
2449 Male, age 74, both hemispheres 406.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1818.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1818.1
FF:10182-103D2 60 years, female 2381.2
FF:10165-103B3 76 years, female 1255.1
Medulla oblongata
Scaled Tags Per Million: 1434.3
FF:10174-103C3 60 years, female 1944.8
FF:10038-101F2 18-64 years, mixed 1402.0
FF:10155-103A2 76 years, female 956.2
Pons
Scaled Tags Per Million: 886.6
FF:10033-101E6 18-54 years, mixed 886.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 772.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 772.5
Samples: 4

Max nTPM: 965.7
Min nTPM: 522.9
Sample A Female 786.6
Sample B Female 965.7
Sample C Male 814.6
Sample D Male 522.9
Pons
nTPM: 723.7
Samples: 4

Max nTPM: 950.5
Min nTPM: 465.7
Sample A Female 950.5
Sample B Female 465.7
Sample C Male 589.8
Sample D Male 888.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 447.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 448.0
Samples: 4

Max nTPM: 477.9
Min nTPM: 428.3
Sample A Male 447.8
Sample B Male 428.3
Sample C Female 437.8
Sample D Female 477.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 15.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.8
74819255 Antisense, RP_060315_02_D07, Mouse strain C57BL/6J (56 days, male) 15.0
68744958 Antisense, RP_050210_01_A04, Mouse strain C57BL/6J (56 days, male) 12.5
Pons
Expression energy: 15.2
74819255 Antisense, RP_060315_02_D07, Mouse strain C57BL/6J (56 days, male) 15.8
68744958 Antisense, RP_050210_01_A04, Mouse strain C57BL/6J (56 days, male) 14.7

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