HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:163.0 nTPM
HPA Brain:113.8 nTPM
GTEx:163.0 nTPM
FANTOM5:157.1 Scaled Tags Per Million
Pig:70.8 nTPM
Mouse:165.3 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028882
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 113.8
Sample id Sample description nTPM
Hippocampus
nTPM: 113.8
1898 Male, age 80, left hemisphere 129.8
2621 Female, age 67, right hemisphere 118.6
1855 Male, age 76, left hemisphere 113.6
2529 Female, age 94, left hemisphere 112.9
1911 Female, age 85, right hemisphere 110.8
2148 Female, age 91, left hemisphere 97.2
Dentate gyrus
nTPM: 99.3
2010 Male, age 76, both hemispheres 119.4
2528 Male, age 74, both hemispheres 111.5
2246 Female, age 85, both hemispheres 103.4
2530 Female, age 94, left hemisphere 94.5
1927 Female, age 91, both hemispheres 92.3
2531 Female, age 67, both hemispheres 75.0
Entorhinal gyrus
nTPM: 86.7
2117 Female, age 91, right hemisphere 112.8
1938 Female, age 85, left hemisphere 95.6
1787 Male, age 76, left hemisphere 85.9
2764 Male, age 80, right hemisphere 85.6
2686 Male, age 75, right hemisphere 80.4
2613 Female, age 94, left hemisphere 59.7
Hippocampus, CA1
nTPM: 108.0
2527 Male, age 74, both hemispheres 117.3
1873 Female, age 85, both hemispheres 114.5
2749 Male, age 80, left hemisphere 109.2
2045 Male, age 76, both hemispheres 106.0
2082 Female, age 91, right hemisphere 92.7
Hippocampus, CA2
nTPM: 104.1
2249 Male, age 74, both hemispheres 137.3
1963 Male, age 80, left hemisphere 113.3
1892 Male, age 76, both hemispheres 98.8
1940 Female, age 85, left hemisphere 96.6
2113 Female, age 91, right hemisphere 89.7
2437 Female, age 94, left hemisphere 88.7
Hippocampus, CA3
nTPM: 100.2
2436 Male, age 74, both hemispheres 148.2
1891 Female, age 85, both hemispheres 112.2
1867 Male, age 76, both hemispheres 94.5
2137 Male, age 80, left hemisphere 85.6
2620 Female, age 94, left hemisphere 83.3
2861 Female, age 67, both hemispheres 77.1
Parahippocampal cortex
nTPM: 84.2
2018 Male, age 76, both hemispheres 99.1
1933 Female, age 85, both hemispheres 92.9
2532 Female, age 72, left hemisphere 88.7
2250 Female, age 67, right hemisphere 85.1
2692 Male, age 74, both hemispheres 85.1
1850 Male, age 80, both hemispheres 84.4
1990 Female, age 91, right hemisphere 83.3
2245 Female, age 91, both hemispheres 80.8
2693 Female, age 94, both hemispheres 71.3
2622 Female, age 67, right hemisphere 71.0
Perirhinal gyrus
nTPM: 82.9
1847 Female, age 91, left hemisphere 91.1
1841 Female, age 85, right hemisphere 84.7
2521 Female, age 94, right hemisphere 81.9
1794 Male, age 80, right hemisphere 80.7
2848 Male, age 76, right hemisphere 76.0
Subiculum
nTPM: 106.3
2042 Male, age 76, both hemispheres 128.9
1901 Male, age 80, both hemispheres 106.4
2729 Female, age 91, right hemisphere 104.1
2619 Male, age 74, both hemispheres 100.7
2438 Female, age 94, left hemisphere 99.4
1977 Female, age 85, both hemispheres 98.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 163.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 163.0
Samples: 197

Max nTPM: 284.0
Min nTPM: 101.8
Std nTPM: 33.0
Median nTPM: 157.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 284.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 261.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 248.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 240.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 233.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 232.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 226.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 224.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 221.8
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 221.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 218.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 157.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 157.1
FF:10169-103B7 60 years, female 197.3
FF:10153-102I9 76 years, female 116.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.8
Pig sample Sample description nTPM
Subiculum
nTPM: 59.0
Samples: 4

Max nTPM: 78.4
Min nTPM: 45.4
Sample A Female 78.4
Sample B Female 57.6
Sample C Male 45.4
Sample D Male 54.7
Dorsal hippocampus
nTPM: 70.9
Samples: 4

Max nTPM: 92.7
Min nTPM: 54.6
Sample A Female 92.7
Sample B Female 59.6
Sample C Male 76.5
Sample D Male 54.6
Entorhinal cortex
nTPM: 53.7
Samples: 4

Max nTPM: 62.6
Min nTPM: 41.7
Sample A Female 41.7
Sample B Female 62.5
Sample C Male 62.6
Sample D Male 48.1
Ventral hippocampus
nTPM: 63.0
Samples: 4

Max nTPM: 72.6
Min nTPM: 59.5
Sample A Female 59.5
Sample B Female 60.1
Sample C Male 72.6
Sample D Male 59.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 165.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 130.6
Samples: 4

Max nTPM: 138.4
Min nTPM: 123.7
Sample A Male 123.7
Sample B Male 125.7
Sample C Female 138.4
Sample D Female 134.5
Hippocampal formation
nTPM: 165.3
Samples: 4

Max nTPM: 176.4
Min nTPM: 153.8
Sample A Male 163.1
Sample B Male 153.8
Sample C Female 176.4
Sample D Female 167.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
69838004 Antisense, RP_050224_01_E09, Mouse strain C57BL/6J (56 days, male) 3.6
74819345 Antisense, RP_060315_02_E12, Mouse strain C57BL/6J (56 days, male) 1.7

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