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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:80.8 nTPM
GTEx:80.8 nTPM
FANTOM5:54.7 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.8
GTEx sample id Sample description nTPM
Retina
Average nTPM: 80.8
Samples: 105

Max nTPM: 206.2
Min nTPM: 0.0
Std nTPM: 81.3
Median nTPM:
379_1 60 years, male 206.2
126_1 63 years, male 199.4
145_1 84 years, male 198.8
246_1 77 years, male 197.9
322_1 76 years, male 196.2
447_1 81 years, male 190.3
17_1 71 years, male 185.1
189_1 76 years, male 182.6
396_1 62 years, male 181.2
384_1 83 years, male 178.5
405_1 91 years, male 177.6
324_1 76 years, male 176.5
311_1 78 years, male 175.0
18_1 88 years, male 174.6
526_1 61 years, male 172.0
316_1 62 years, male 169.7
217_1 76 years, male 168.4
386_1 76 years, male 167.8
237_1 82 years, male 165.9
468_1 89 years, male 165.8
81_1 67 years, male 165.7
137_1 83 years, male 163.5
319_1 81 years, male 162.3
317_1 60 years, male 161.5
117_1 61 years, male 160.7
347_1 72 years, male 159.6
173_1 67 years, male 159.2
266_1 85 years, male 157.3
348_1 84 years, male 156.9
501_1 88 years, male 155.5
177_1 74 years, male 153.9
115_1 83 years, male 153.0
480_1 63 years, male 153.0
349_1 83 years, male 149.8
32_1 67 years, male 149.7
243_1 75 years, male 149.2
265_1 87 years, male 147.7
99_1 64 years, male 146.5
89_1 63 years, male 145.6
503_1 68 years, male 144.9
318_1 68 years, male 144.8
352_1 62 years, male 143.9
291_1 76 years, male 141.9
251_1 78 years, male 141.6
406_1 79 years, male 139.3
351_1 91 years, male 136.4
314_1 67 years, male 136.1
42_1 85 years, male 133.4
517_1 88 years, male 132.3
292_1 71 years, male 132.2
149_1 88 years, male 129.5
506_1 65 years, male 129.1
163_1 78 years, male 118.6
394_1 75 years, female 0.2
4_1 88 years, female 0.1
229_1 69 years, female 0.1
254_1 77 years, female 0.1
308_1 70 years, female 0.1
321_1 62 years, female 0.1
350_1 84 years, female 0.1
376_1 75 years, female 0.1
377_1 82 years, female 0.1
389_1 86 years, female 0.1
413_1 59 years, female 0.1
490_1 67 years, female 0.1
495_1 57 years, female 0.1
2_1 77 years, female 0.0
6_1 73 years, female 0.0
9_1 66 years, female 0.0
35_1 74 years, female 0.0
41_1 94 years, female 0.0
43_1 64 years, female 0.0
109_1 81 years, female 0.0
119_1 70 years, female 0.0
120_1 70 years, female 0.0
139_1 64 years, female 0.0
142_1 61 years, female 0.0
153_1 70 years, female 0.0
162_1 79 years, female 0.0
172_1 72 years, female 0.0
218_1 71 years, female 0.0
264_1 73 years, female 0.0
286_1 68 years, female 0.0
288_1 66 years, female 0.0
293_1 68 years, female 0.0
295_1 61 years, female 0.0
307_1 66 years, female 0.0
313_1 79 years, female 0.0
315_1 62 years, female 0.0
320_1 89 years, female 0.0
335_1 73 years, female 0.0
353_1 82 years, female 0.0
354_1 81 years, female 0.0
355_1 70 years, female 0.0
356_1 87 years, female 0.0
375_1 74 years, female 0.0
404_1 82 years, female 0.0
414_1 84 years, female 0.0
415_1 77 years, female 0.0
425_1 59 years, female 0.0
452_1 88 years, female 0.0
466_1 57 years, female 0.0
491_1 89 years, female 0.0
499_1 55 years, female 0.0
518_1 75 years, female 0.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

54.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 54.7
FF:10030-101E3 24-65 years, mixed 54.7

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