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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:108.9 nTPM
HPA Brain:13.7 nTPM
GTEx:108.9 nTPM
FANTOM5:0.0 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 11.4
2048 Male, age 55, midline 13.4
2565 Male, age 75, midline 12.4
2194 Female, age 79, both hemispheres 11.3
2816 Male, age 47, midline 10.2
1981 Female, age 72, midline 9.8
Cervical spinal cord, dorsal horn
nTPM: 12.0
2069 Male, age 47, both hemispheres 14.8
2296 Male, age 66, both hemispheres 13.5
1877 Male, age 55, unknown 12.7
2721 Male, age 90, both hemispheres 11.3
2173 Female, age 72, unknown 10.2
2297 Male, age 75, both hemispheres 9.5
Cervical spinal cord, ventral horn
nTPM: 13.7
2480 Male, age 75, both hemispheres 19.2
2809 Male, age 90, both hemispheres 16.1
2820 Female, age 79, both hemispheres 13.0
2295 Male, age 66, both hemispheres 12.2
2068 Male, age 55, unknown 11.7
2098 Female, age 72, unknown 10.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 108.9
Samples: 159

Max nTPM: 319.5
Min nTPM: 0.0
Std nTPM: 85.9
Median nTPM: 142.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 319.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 268.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 264.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 253.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 245.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 238.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 226.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 221.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 217.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 217.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 216.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 214.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 212.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 204.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 203.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 202.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 198.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 193.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 193.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 193.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 193.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 189.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 187.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 186.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 186.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 186.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 184.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 184.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 183.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 182.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 181.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 181.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 180.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 180.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 178.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 177.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 177.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 175.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 175.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 169.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 169.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 169.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 168.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 168.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 167.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 166.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 166.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 166.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 165.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 164.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 164.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 164.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 163.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 163.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 163.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 162.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 161.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 159.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 158.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 158.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 157.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 156.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 156.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 156.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 155.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 153.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 151.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 150.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 149.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 148.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 146.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 145.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 144.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 144.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 144.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 144.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 143.8
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 143.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 143.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 142.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 142.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 142.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 141.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 140.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 139.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 138.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 137.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 137.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 137.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 134.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 134.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 134.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 129.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 127.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 127.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 122.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 119.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 119.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 117.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 117.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 112.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 109.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 5.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 0.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 0.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 0.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 0.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 0.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 0.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 0.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 0.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 0.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 0.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 0.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 0.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 0.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 0.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 0.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 0.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 0.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 0.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 0.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 0.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 0.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 0.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 0.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 0.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 0.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 0.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 0.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 0.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 0.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 0.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 0.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 0.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 0.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 0.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 0.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 0.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 0.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 0.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 0.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 0.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 0.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 0.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 0.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 0.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 0.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 0.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 0.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 0.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 0.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 0.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 0.0
FF:10181-103D1 60 years, female 0.0
FF:10159-103A6 76 years, female 0.0

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