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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:177.5 nTPM
GTEx:177.5 nTPM
FANTOM5:362.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055312Antibody CAB047343Antibody CAB069914
Squamous epithelial cells MediumNot detectedNot detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 177.5
Samples: 156

Max nTPM: 638.7
Min nTPM: 60.2
Std nTPM: 91.1
Median nTPM: 152.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 638.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 496.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 475.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 439.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 427.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 393.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 391.4
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 359.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 352.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 350.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 330.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 328.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 323.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 323.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 311.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 305.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 301.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 297.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 286.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 283.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 276.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 258.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 247.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 246.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 243.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 238.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 238.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 238.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 233.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 232.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 229.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 227.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 224.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 215.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 214.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 212.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 211.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 203.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 201.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 200.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 197.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 197.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 191.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 189.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 189.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 188.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 187.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 186.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 184.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 184.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 183.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 183.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 181.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 181.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 180.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 179.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 179.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 176.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 174.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 173.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 172.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 172.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 172.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 169.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 167.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 167.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 164.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 163.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 161.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 161.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 161.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 161.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 159.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 159.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 159.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 156.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 154.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 153.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 152.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 151.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 149.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 147.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 147.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 147.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 146.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 146.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 145.8
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 142.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 142.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 138.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 138.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 137.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 136.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 135.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 135.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 135.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 134.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 134.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 132.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 132.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 132.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 131.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 130.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 130.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 130.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 129.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 127.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 125.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 120.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 120.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 119.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 119.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 119.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 119.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 118.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 117.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 116.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 116.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 115.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 115.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 115.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 114.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 112.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 112.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 111.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 110.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 110.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 110.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 109.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 108.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 108.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 108.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 107.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 104.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 104.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 102.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 101.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 100.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 96.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 95.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 93.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 92.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 92.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 92.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 91.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 89.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 87.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 87.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 87.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 84.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 82.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 80.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 77.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 76.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 63.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 60.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

362.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 362.7
FF:10204-103F6 68 years, female 362.7

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