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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:295.6 nTPM
GTEx:295.6 nTPM
FANTOM5:389.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014263Antibody CAB000007
Squamous epithelial cells Not detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

295.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 295.6
Samples: 156

Max nTPM: 1930.8
Min nTPM: 1.5
Std nTPM: 347.1
Median nTPM: 166.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1930.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1427.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1416.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1342.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1281.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1255.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1029.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1027.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1023.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1002.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 996.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 982.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 919.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 905.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 889.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 878.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 850.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 791.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 666.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 641.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 637.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 621.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 617.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 616.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 564.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 553.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 549.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 519.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 516.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 461.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 454.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 445.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 427.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 418.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 414.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 410.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 406.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 384.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 375.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 364.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 363.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 362.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 342.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 339.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 329.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 328.7
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 315.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 307.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 307.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 294.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 288.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 284.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 277.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 273.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 273.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 265.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 263.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 254.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 250.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 250.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 249.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 245.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 241.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 234.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 229.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 225.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 206.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 204.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 198.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 190.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 190.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 189.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 187.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 183.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 179.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 174.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 173.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 166.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 165.8
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 162.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 158.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 155.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 154.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 153.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 146.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 144.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 144.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 143.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 143.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 142.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 136.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 135.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 132.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 125.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 117.1
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 116.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 113.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 107.5
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 107.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 103.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 100.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 99.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 98.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 96.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 92.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 92.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 90.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 80.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 78.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 77.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 74.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 73.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 71.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 68.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 68.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 67.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 66.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 63.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 62.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 60.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 59.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 59.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 58.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 56.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 52.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 49.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 49.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 47.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 44.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 42.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 37.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 36.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 22.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 22.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 21.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 20.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 18.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 17.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 15.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 13.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 13.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 13.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 11.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 11.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 10.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 9.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 7.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 6.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 6.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 4.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 4.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 3.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 3.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 3.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 3.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

389.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 389.5
FF:10204-103F6 68 years, female 389.5

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