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RPL36
HPA
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  • RPL36
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:506.8 nTPM
FANTOM5:176.2 Scaled Tags Per Million
Pig:205.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047153
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

506.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 506.8
Samples: 246

Max nTPM: 2307.6
Min nTPM: 166.5
Std nTPM: 207.7
Median nTPM: 476.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2307.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1290.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1178.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1060.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1056.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1003.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1003.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 984.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 972.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 897.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 882.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 855.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 849.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 803.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 792.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 790.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 769.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 745.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 743.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 738.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 735.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 733.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 727.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 718.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 716.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 710.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 697.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 696.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 696.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 688.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 686.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 683.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 672.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 669.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 663.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 659.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 658.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 653.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 651.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 649.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 649.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 640.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 634.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 626.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 625.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 622.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 621.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 619.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 618.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 617.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 610.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 606.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 596.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 595.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 594.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 591.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 589.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 588.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 584.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 581.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 580.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 579.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 579.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 578.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 577.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 573.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 572.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 571.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 568.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 565.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 564.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 561.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 561.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 559.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 556.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 555.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 555.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 553.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 553.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 552.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 547.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 547.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 546.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 534.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 533.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 530.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 528.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 526.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 525.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 522.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 521.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 519.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 514.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 513.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 512.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 512.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 511.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 509.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 508.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 507.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 506.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 504.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 500.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 497.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 497.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 496.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 495.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 494.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 491.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 491.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 491.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 490.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 490.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 488.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 488.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 486.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 485.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 481.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 481.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 477.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 477.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 477.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 477.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 475.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 474.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 474.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 473.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 473.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 466.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 465.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 464.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 464.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 463.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 462.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 462.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 460.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 460.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 457.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 450.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 449.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 448.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 448.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 446.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 446.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 445.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 445.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 443.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 442.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 441.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 439.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 439.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 434.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 434.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 434.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 433.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 431.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 431.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 431.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 427.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 424.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 422.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 420.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 420.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 419.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 415.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 407.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 407.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 406.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 402.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 400.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 400.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 397.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 394.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 391.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 391.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 389.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 389.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 386.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 386.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 384.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 382.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 381.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 380.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 375.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 368.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 368.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 368.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 367.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 365.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 363.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 363.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 360.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 359.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 359.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 356.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 355.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 355.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 354.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 353.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 352.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 350.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 350.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 348.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 347.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 346.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 346.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 345.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 344.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 341.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 341.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 336.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 333.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 331.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 327.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 324.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 324.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 321.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 321.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 320.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 318.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 314.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 312.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 311.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 307.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 305.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 300.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 300.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 299.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 299.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 299.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 290.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 285.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 285.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 285.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 282.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 278.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 273.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 272.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 268.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 265.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 258.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 254.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 210.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 194.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 166.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

176.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.2
FF:10164-103B2 76 years, female 176.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.3
Pig sample Sample description nTPM
Caudate
nTPM: 205.4
Samples: 4

Max nTPM: 243.2
Min nTPM: 174.7
Sample A Female 185.2
Sample B Female 218.3
Sample C Male 243.2
Sample D Male 174.7

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