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RPL36
HPA
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: High
Enterocytes: High
Enterocytes - Microvilli: Not detected
Goblet cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:840.5 nTPM
HPA:508.8 nTPM
GTEx:840.5 nTPM
FANTOM5:161.0 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047153
Endocrine cells High
Enterocytes High
Enterocytes - Microvilli Not detected
Goblet cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

508.8
overview
Male, age 65
Small intestine sample 232
nTPM: 706
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 470.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 413.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 446

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

840.5
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 840.5
Samples: 187

Max nTPM: 1815.0
Min nTPM: 448.9
Std nTPM: 248.9
Median nTPM: 808.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1815.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1792.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 1687.1
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1569.0
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1532.5
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1356.0
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1353.8
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1322.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1309.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1309.4
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1283.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1271.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1246.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1201.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1200.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1167.3
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1145.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1145.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1140.5
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1135.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 1134.1
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1115.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1105.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1100.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1091.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1091.3
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1091.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1088.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1060.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1058.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1057.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1054.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1053.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1052.1
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1043.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1022.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1019.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1009.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1003.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1002.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 997.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 992.2
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 988.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 979.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 972.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 970.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 967.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 964.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 963.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 961.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 961.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 959.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 954.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 954.3
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 954.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 945.7
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 941.9
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 934.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 932.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 926.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 924.4
GTEX-1192X-2526-SM-59868 50-59 years, male 921.2
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 913.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 908.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 904.6
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 903.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 902.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 902.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 900.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 900.8
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 895.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 893.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 888.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 883.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 881.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 881.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 875.4
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 872.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 866.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 865.4
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 860.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 856.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 850.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 847.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 842.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 838.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 837.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 828.5
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 826.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 823.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 819.6
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 819.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 811.2
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 808.3
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 808.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 803.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 802.5
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 798.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 784.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 782.9
GTEX-117YX-0326-SM-5GICL 50-59 years, male 773.7
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 772.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 770.2
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 767.3
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 766.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 761.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 754.3
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 748.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 747.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 744.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 733.0
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 731.2
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 729.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 723.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 715.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 708.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 704.4
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 702.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 699.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 688.2
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 687.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 686.7
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 684.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 683.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 681.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 680.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 680.7
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 678.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 676.4
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 676.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 675.5
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 671.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 671.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 670.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 663.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 662.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 660.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 660.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 654.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 653.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 652.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 645.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 637.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 636.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 635.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 634.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 626.3
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 625.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 625.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 623.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 620.1
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 619.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 618.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 615.9
GTEX-1122O-1326-SM-5H11F 60-69 years, female 615.1
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 615.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 609.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 607.6
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 606.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 603.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 596.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 595.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 591.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 582.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 574.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 571.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 571.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 568.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 565.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 558.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 556.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 555.7
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 551.5
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 550.6
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 549.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 543.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 540.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 537.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 525.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 520.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 517.0
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 514.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 510.4
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 504.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 499.8
GTEX-YFCO-1326-SM-664NV 40-49 years, male 499.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 448.9
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

161.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 161.0
FF:10024-101D6 15,40,85 years, mixed 161.0

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